Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aa31LG2G13210 Aethionema arabicum HOM05D006116 ORTHO05D007795 0.0e+00 1572.4 780 100.0
BolC7t45369H Brassica oleracea HOM05D006116 ORTHO05D007795 1.1e-177 627.9 407 78.9
C07p48610 Brassica napus HOM05D006116 ORTHO05D007795 1.5e-176 624.0 407 78.4
BraA03t14121Z Brassica rapa HOM05D006116 ORTHO05D007795 2.3e-164 583.6 407 74.7
A03p50320 Brassica napus HOM05D006116 ORTHO05D007795 1.5e-163 580.9 407 74.4
CARHR223700 Cardamine hirsuta HOM05D006116 ORTHO05D007795 9.7e-163 578.2 406 74.6
AL7G37600 Arabidopsis lyrata HOM05D006116 ORTHO05D007795 7.7e-160 568.5 404 73.5
THA.LOC104813328 Tarenaya hassleriana HOM05D006116 ORTHO05D007795 5.0e-159 565.8 409 71.1
COL.COLO4_06703 Corchorus olitorius HOM05D006116 ORTHO05D007795 2.3e-156 557.0 427 67.9
Ciclev10020221m.g Citrus clementina HOM05D006116 ORTHO05D007795 8.2e-154 548.5 415 68.0
FAN18G3779 Fragaria x ananassa HOM05D006116 ORTHO05D007795 7.0e-153 545.4 416 67.5
Actinidia03408 Actinidia chinensis HOM05D006116 ORTHO05D007795 1.2e-152 544.7 413 68.3
Carub.0007s2428 Capsella rubella HOM05D006116 ORTHO05D007795 2.9e-151 540.0 372 73.9
FvH4_5g20810 Fragaria vesca HOM05D006116 ORTHO05D007795 5.0e-151 539.3 416 66.8
FAN08G3374 Fragaria x ananassa HOM05D006116 ORTHO05D007795 1.9e-150 537.3 412 67.2
Prupe.5G050800 Prunus persica HOM05D006116 ORTHO05D007795 1.6e-149 534.3 418 65.8
Rhsim11G0056500 Rhododendron simsii HOM05D006116 ORTHO05D007795 2.1e-149 533.9 419 65.6
vmacro00376 Vaccinium macrocarpon HOM05D006116 ORTHO05D007795 1.0e-148 531.6 419 65.9
Sp7g17070 Schrenkiella parvula HOM05D006116 ORTHO05D007795 6.7e-148 528.9 401 69.8
CSS0043999 Camellia sinensis var. sinensis HOM05D006116 ORTHO05D007795 8.8e-148 528.5 424 64.4
FAN04G0705 Fragaria x ananassa HOM05D006116 ORTHO05D007795 8.8e-148 528.5 412 66.0
Thhalv10025290m.g Eutrema salsugineum HOM05D006116 ORTHO05D007795 2.0e-147 527.3 408 68.9
arahy.Tifrunner.gnm1.ann1.F87Z6X Arachis hypogaea HOM05D006116 ORTHO05D007795 9.7e-147 525.0 423 66.0
arahy.Tifrunner.gnm1.ann1.L13TYF Arachis hypogaea HOM05D006116 ORTHO05D007795 1.7e-146 524.2 422 65.9
MD04G1057000 Malus domestica HOM05D006116 ORTHO05D007795 6.3e-146 522.3 419 64.7
CSS0034154 Camellia sinensis var. sinensis HOM05D006116 ORTHO05D007795 1.8e-145 520.8 403 66.0
Nitab4.5_0006135g0020 Nicotiana tabacum HOM05D006116 ORTHO05D007795 1.8e-145 520.8 406 66.0
ClCG10G002040 Citrullus lanatus HOM05D006116 ORTHO05D007795 2.4e-145 520.4 406 66.5
Lj4g0012718 Lotus japonicus HOM05D006116 ORTHO05D007795 5.3e-145 519.2 417 65.9
Oeu020145.1 Olea europaea HOM05D006116 ORTHO05D007795 2.7e-144 516.9 414 65.0
Gorai.008G230000 Gossypium raimondii HOM05D006116 ORTHO05D007795 3.5e-144 516.5 417 66.4
CANSAT21G1244 Cannabis sativa HOM05D006116 ORTHO05D007795 7.7e-144 515.4 442 61.8
Hma1.2p1_0414F.1_g147510 Hydrangea macrophylla HOM05D006116 ORTHO05D007795 2.9e-143 513.5 410 67.3
Nitab4.5_0001255g0040 Nicotiana tabacum HOM05D006116 ORTHO05D007795 3.8e-143 513.1 418 64.6
Gohir.A12G211900 Gossypium hirsutum HOM05D006116 ORTHO05D007795 6.5e-143 512.3 417 65.9
PGR042G3339 Punica granatum HOM05D006116 ORTHO05D007795 1.1e-142 511.5 421 63.4
PGSC0003DMG400001856 Solanum tuberosum HOM05D006116 ORTHO05D007795 1.5e-142 511.1 405 63.7
CAN.G1445.8 Capsicum annuum HOM05D006116 ORTHO05D007795 3.2e-142 510.0 410 64.6
Glyma.17G150200 Glycine max HOM05D006116 ORTHO05D007795 3.2e-142 510.0 397 67.3
Lalb_Chr05g0220761 Lupinus albus HOM05D006116 ORTHO05D007795 9.4e-142 508.4 401 65.6
Ca_22031_v3 Cicer arietinum L. HOM05D006116 ORTHO05D007795 1.2e-141 508.1 419 63.7
MELO3C013885.2 Cucumis melo HOM05D006116 ORTHO05D007795 3.6e-141 506.5 413 65.1
CsaV3_3G002130 Cucumis sativus L. HOM05D006116 ORTHO05D007795 3.6e-141 506.5 409 64.8
Cc08_g01540 Coffea canephora HOM05D006116 ORTHO05D007795 8.0e-141 505.4 421 63.9
Sopen08g026090 Solanum pennellii HOM05D006116 ORTHO05D007795 8.0e-141 505.4 403 64.0
HanXRQChr03g0087311 Helianthus annuus HOM05D006116 ORTHO05D007795 2.3e-140 503.8 408 64.2
Solyc08g077510.4 Solanum lycopersicum HOM05D006116 ORTHO05D007795 2.3e-140 503.8 402 63.2
ECA240G2524 Erigeron canadensis HOM05D006116 ORTHO05D007795 3.0e-140 503.4 396 63.4
TPR.G11192 Trifolium pratense HOM05D006116 ORTHO05D007795 6.8e-140 502.3 426 62.4
Medtr4g099100 Medicago truncatula HOM05D006116 ORTHO05D007795 2.0e-139 500.7 430 61.6
Thecc.03G237000 Theobroma cacao HOM05D006116 ORTHO05D007795 1.3e-138 498.0 411 64.5
CiPaw.11G085600 Carya illinoinensis HOM05D006116 ORTHO05D007795 1.7e-138 497.7 415 63.9
Potri.003G085600 Populus trichocarpa HOM05D006116 ORTHO05D007795 3.7e-138 496.5 409 62.8
Duzib205G0680 Durio zibethinus HOM05D006116 ORTHO05D007795 3.1e-137 493.4 412 63.3
QL12p007972 Quercus lobata HOM05D006116 ORTHO05D007795 3.1e-137 493.4 424 61.8
Peaxi162Scf00084g00117 Petunia axillaris HOM05D006116 ORTHO05D007795 1.2e-136 491.5 409 62.6
Lj8A287G22 Lonicera japonica HOM05D006116 ORTHO05D007795 1.0e-135 488.4 390 64.9
PSO732G0356 Papaver somniferum HOM05D006116 ORTHO05D007795 1.3e-135 488.0 420 61.4
Zm00001eb075030 Zea mays HOM05D006116 ORTHO05D007795 2.3e-135 487.3 426 58.9
Os04g0542900 Oryza sativa ssp. japonica HOM05D006116 ORTHO05D007795 5.0e-135 486.1 423 59.6
VMungo0251G0386 Vigna mungo HOM05D006116 ORTHO05D007795 1.1e-134 485.0 426 59.9
Phvul.003G227000 Phaseolus vulgaris HOM05D006116 ORTHO05D007795 1.9e-134 484.2 428 59.1
RcHm_v2.0_Chr7g0207741 Rosa chinensis HOM05D006116 ORTHO05D007795 1.9e-134 484.2 416 60.6
GSVIVG01013271001 Vitis vinifera HOM05D006116 ORTHO05D007795 1.9e-134 484.2 421 60.3
TWI60G0034 Tripterygium wilfordii HOM05D006116 ORTHO05D007795 2.5e-134 483.8 412 62.6
Aqoxy7G00869 Aquilegia oxysepala HOM05D006116 ORTHO05D007795 9.5e-134 481.9 412 60.7
Gohir.D12G214400 Gossypium hirsutum HOM05D006116 ORTHO05D007795 1.2e-133 481.5 302 77.2
PSO675G1792 Papaver somniferum HOM05D006116 ORTHO05D007795 4.7e-133 479.6 401 61.3
Eucgr.E00329 Eucalyptus grandis HOM05D006116 ORTHO05D007795 1.0e-132 478.4 413 61.0
SGA_v2.0_scaffold20G09247 Striga asiatica HOM05D006116 ORTHO05D007795 6.8e-132 475.7 311 72.7
Migut.E00901 Erythranthe guttata HOM05D006116 ORTHO05D007795 1.2e-131 474.9 308 74.0
Lsat_1_v5_gn_6_88480 Lactuca sativa HOM05D006116 ORTHO05D007795 1.2e-131 474.9 409 60.9
Sc07g0009020 Simmondsia chinensis HOM05D006116 ORTHO05D007795 1.2e-131 474.9 421 60.3
Ah.12g053810 Amaranthus hybridus HOM05D006116 ORTHO05D007795 2.0e-131 474.2 395 61.3
DCAR_008310 Daucus carota HOM05D006116 ORTHO05D007795 2.6e-131 473.8 429 60.1
Nn1g00701 Nelumbo nucifera HOM05D006116 ORTHO05D007795 2.6e-131 473.8 417 59.5
Manes.17G019700 Manihot esculenta HOM05D006116 ORTHO05D007795 2.8e-130 470.3 416 60.8
Lalb_Chr09g0329681 Lupinus albus HOM05D006116 ORTHO05D007795 4.9e-130 469.5 330 69.1
Hund14464 Selenicereus undatus HOM05D006116 ORTHO05D007795 9.2e-129 465.3 415 59.3
unitig_21.g20374 Utricularia gibba HOM05D006116 ORTHO05D007795 2.0e-128 464.2 364 64.0
Sed0023369 Sechium edule HOM05D006116 ORTHO05D007795 2.7e-128 463.8 410 61.5
MSTRG.1960 Avicennia marina HOM05D006116 ORTHO05D007795 3.3e-126 456.8 395 61.0
ClCG00G004790 Citrullus lanatus HOM05D006116 ORTHO05D007795 7.3e-126 455.7 406 60.8
AUR62018802 Chenopodium quinoa HOM05D006116 ORTHO05D007795 4.0e-124 449.9 404 58.7
EL10Ac5g12218 Beta vulgaris HOM05D006116 ORTHO05D007795 2.9e-122 443.7 470 53.0
AUR62007200 Chenopodium quinoa HOM05D006116 ORTHO05D007795 5.4e-121 439.5 303 68.6
ATR0829G115 Amborella trichopoda HOM05D006116 ORTHO05D007795 7.0e-121 439.1 428 56.3
HPP92_020688 Vanilla planifolia HOM05D006116 ORTHO05D007795 3.1e-116 423.7 296 68.6
SEGI_40490 Sequoiadendron giganteum HOM05D006116 ORTHO05D007795 3.7e-114 416.8 291 67.7
BcaC06g33529 Brassica carinata HOM05D006116 ORTHO05D007795 2.4e-113 414.1 321 69.8
Pp3c14_16100 Physcomitrium patens HOM05D006116 ORTHO05D007795 1.2e-107 395.2 331 58.0
Pp3c14_16101 Physcomitrium patens HOM05D006116 ORTHO05D007795 1.2e-107 395.2 331 58.0
CiPaw.12G058000 Carya illinoinensis HOM05D006116 ORTHO05D007795 1.0e-103 382.1 231 78.4
AagrBONN_evm.TU.Sc2ySwM_368.518 Anthoceros agrestis HOM05D006116 ORTHO05D007795 3.9e-103 380.2 401 51.9
Pp3c2_10960 Physcomitrium patens HOM05D006116 ORTHO05D007795 1.5e-102 378.3 311 60.5
SMO356G0030 Selaginella moellendorffii HOM05D006116 ORTHO05D007795 2.5e-102 377.5 308 61.4
TAR375G0725 Trochodendron aralioides HOM05D006116 ORTHO05D007795 3.3e-102 377.1 352 59.7
Mapoly0141s0023 Marchantia polymorpha HOM05D006116 ORTHO05D007795 4.0e-100 370.2 395 51.6
Migut.E00812 Erythranthe guttata HOM05D006116 ORTHO05D007795 4.9e-98 363.2 221 76.5
Zm00001eb091650 Zea mays HOM05D006116 ORTHO05D007795 8.4e-98 362.5 310 58.1
Zm00001eb313880 Zea mays HOM05D006116 ORTHO05D007795 7.1e-97 359.4 277 63.2
Psat4g077320 Pisum sativum HOM05D006116 ORTHO05D007795 1.1e-94 352.1 316 59.5
TAR375G0708 Trochodendron aralioides HOM05D006116 ORTHO05D007795 3.3e-94 350.5 336 58.9
FAN13G0371 Fragaria x ananassa HOM05D006116 ORTHO05D007795 1.1e-92 345.5 308 60.4
Zm00001eb319310 Zea mays HOM05D006116 ORTHO05D007795 5.6e-86 323.2 203 75.9
Haze_08334 Corylus avellana HOM05D006116 ORTHO05D007795 1.1e-84 318.9 321 54.5
CBR_g27781 Chara braunii HOM05D006116 ORTHO05D007795 2.5e-70 271.2 273 47.6
Zm00001eb129530 Zea mays HOM05D006116 ORTHO05D007795 1.6e-64 251.9 208 59.1
Zm00001eb391960 Zea mays HOM05D006116 ORTHO05D007795 1.6e-64 251.9 208 59.1
Cre14.g631900 Chlamydomonas reinhardtii HOM05D006116 ORTHO05D007795 4.6e-64 250.4 277 43.0
Dinv28896 Davidia involucrata HOM05D006116 ORTHO05D007795 1.2e-59 235.7 189 67.2
Atru.chr9.1147 Acer truncatum HOM05D006116 ORTHO05D007795 3.3e-54 217.6 119 77.3
Zm00001eb268110 Zea mays HOM05D006116 ORTHO05D007795 1.1e-41 176.0 191 48.2
PSO732G0385 Papaver somniferum HOM05D006116 ORTHO05D007795 2.6e-38 164.9 226 47.8
Zm00001eb276710 Zea mays HOM05D006116 ORTHO05D007795 2.9e-34 151.4 134 53.7
Ca_20974_v3 Cicer arietinum L. HOM05D006116 ORTHO05D007795 8.8e-31 139.8 117 60.7
EL10Ac5g12217 Beta vulgaris HOM05D006116 ORTHO05D007795 6.3e-29 133.7 79 70.9
Lsat_1_v5_gn_7_9401 Lactuca sativa HOM05D006116 ORTHO05D000290 9.1e-28 129.8 127 54.3
TAR375G0859 Trochodendron aralioides HOM05D006116 ORTHO05D007795 3.5e-27 127.9 70 82.9
DCAR_005654 Daucus carota HOM05D006116 ORTHO05D007795 1.3e-21 109.4 65 75.4
CAN.G507.3 Capsicum annuum HOM05D006116 ORTHO05D007795 3.8e-18 97.8 73 58.9
CDE11G0087 Ceratophyllum demersum HOM05D006116 ORTHO05D007795 2.5e-17 95.1 53 77.4
Aqoxy6G01690 Aquilegia oxysepala HOM05D006116 ORTHO05D007795 2.7e-11 75.1 121 33.1
BolC8t48435H Brassica oleracea HOM05D006116 ORTHO05D007795 5.6e-09 67.4 41 70.7
TAR375G0706 Trochodendron aralioides HOM05D006116 ORTHO05D009946 9.5e-09 66.6 81 45.7
Aqoxy7G03532 Aquilegia oxysepala HOM05D006116 ORTHO05D007795 1.4e-07 62.8 59 45.8


User provided reference genes

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