Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aa31LG2G12690 Aethionema arabicum HOM05D007031 ORTHO05D008815 4.2e-121 438.0 210 100.0
THA.LOC104815489 Tarenaya hassleriana HOM05D007031 ORTHO05D008815 8.6e-66 254.2 148 81.1
Carub.0007s2484 Capsella rubella HOM05D007031 ORTHO05D008815 3.3e-65 252.3 139 82.0
AT4G16566 Arabidopsis thaliana HOM05D007031 ORTHO05D008815 5.6e-65 251.5 141 80.1
Thhalv10026497m.g Eutrema salsugineum HOM05D007031 ORTHO05D008815 1.6e-64 250.0 149 79.2
AL7G38260 Arabidopsis lyrata HOM05D007031 ORTHO05D008815 2.1e-64 249.6 141 79.4
CARHR223050 Cardamine hirsuta HOM05D007031 ORTHO05D008815 8.9e-63 244.2 141 78.0
BcaC09g50373 Brassica carinata HOM05D007031 ORTHO05D008815 9.9e-62 240.7 149 75.2
BcaNung00171 Brassica carinata HOM05D007031 ORTHO05D008815 9.9e-62 240.7 149 76.5
BolC1t02559H Brassica oleracea HOM05D007031 ORTHO05D008815 7.1e-60 234.6 201 61.7
BraA01t02001Z Brassica rapa HOM05D007031 ORTHO05D008815 4.6e-59 231.9 154 70.8
TWI60G0154 Tripterygium wilfordii HOM05D007031 ORTHO05D008815 1.1e-57 227.3 142 75.4
Ciclev10022693m.g Citrus clementina HOM05D007031 ORTHO05D008815 1.9e-57 226.5 149 73.2
Gohir.D08G188900 Gossypium hirsutum HOM05D007031 ORTHO05D008815 2.5e-57 226.1 144 71.5
Gorai.004G199000 Gossypium raimondii HOM05D007031 ORTHO05D008815 2.5e-57 226.1 144 71.5
Dinv21635 Davidia involucrata HOM05D007031 ORTHO05D008815 1.6e-56 223.4 142 72.5
Duzib205G0920 Durio zibethinus HOM05D007031 ORTHO05D008815 2.1e-56 223.0 142 70.4
TAR636G3191 Trochodendron aralioides HOM05D007031 ORTHO05D008815 6.2e-56 221.5 142 73.2
Eucgr.E00427 Eucalyptus grandis HOM05D007031 ORTHO05D008815 8.1e-56 221.1 141 72.3
Lsat_1_v5_gn_5_187960 Lactuca sativa HOM05D007031 ORTHO05D008815 8.1e-56 221.1 144 72.9
RcHm_v2.0_Chr7g0203161 Rosa chinensis HOM05D007031 ORTHO05D008815 8.1e-56 221.1 151 74.2
CSS0040909 Camellia sinensis var. sinensis HOM05D007031 ORTHO05D008815 1.4e-55 220.3 147 69.4
Cc08_g12500 Coffea canephora HOM05D007031 ORTHO05D008815 2.4e-55 219.5 138 73.2
Lalb_Chr09g0324411 Lupinus albus HOM05D007031 ORTHO05D008815 2.6e-54 216.1 138 73.2
FAN18G3883 Fragaria x ananassa HOM05D007031 ORTHO05D008815 3.4e-54 215.7 148 70.9
Migut.E01683 Erythranthe guttata HOM05D007031 ORTHO05D008815 4.4e-54 215.3 139 69.8
Solyc08g007380.4 Solanum lycopersicum HOM05D007031 ORTHO05D008815 4.4e-54 215.3 140 69.3
Sopen08g003330 Solanum pennellii HOM05D007031 ORTHO05D008815 4.4e-54 215.3 140 69.3
Migut.E00966 Erythranthe guttata HOM05D007031 ORTHO05D008815 5.8e-54 214.9 139 69.8
MSTRG.13772 Avicennia marina HOM05D007031 ORTHO05D008815 9.9e-54 214.2 143 69.2
Potri.003G076400 Populus trichocarpa HOM05D007031 ORTHO05D008815 9.9e-54 214.2 142 70.4
FvH4_5g18810 Fragaria vesca HOM05D007031 ORTHO05D008815 2.2e-53 213.0 141 71.6
FAN08G1843 Fragaria x ananassa HOM05D007031 ORTHO05D008815 2.2e-53 213.0 151 70.2
Aqoxy5G01014 Aquilegia oxysepala HOM05D007031 ORTHO05D008815 2.9e-53 212.6 142 71.1
FAN13G0327 Fragaria x ananassa HOM05D007031 ORTHO05D008815 2.9e-53 212.6 148 70.3
Sed0003740 Sechium edule HOM05D007031 ORTHO05D008815 3.8e-53 212.2 141 69.5
AL7G38210 Arabidopsis lyrata HOM05D007031 ORTHO05D008815 6.4e-53 211.5 118 79.7
BcaNung02861 Brassica carinata HOM05D007031 ORTHO05D008815 6.4e-53 211.5 145 71.0
Cfa012711 Carpinus fangiana HOM05D007031 ORTHO05D008815 8.4e-53 211.1 141 70.2
Gohir.A08G170700 Gossypium hirsutum HOM05D007031 ORTHO05D008815 1.4e-52 210.3 148 68.9
Glyma.11G032300 Glycine max HOM05D007031 ORTHO05D008815 1.9e-52 209.9 150 66.7
PSO386G0128 Papaver somniferum HOM05D007031 ORTHO05D008815 4.2e-52 208.8 143 67.1
HPP92_027426 Vanilla planifolia HOM05D007031 ORTHO05D008815 4.2e-52 208.8 142 66.9
CANSAT21G0077 Cannabis sativa HOM05D007031 ORTHO05D008815 5.4e-52 208.4 134 70.1
Lj2A217G30 Lonicera japonica HOM05D007031 ORTHO05D008815 7.1e-52 208.0 141 69.5
Phvul.002G062701 Phaseolus vulgaris HOM05D007031 ORTHO05D008815 7.1e-52 208.0 145 67.6
Lj2g0002187 Lotus japonicus HOM05D007031 ORTHO05D008815 9.3e-52 207.6 146 67.8
TPR.G25905 Trifolium pratense HOM05D007031 ORTHO05D008815 9.3e-52 207.6 141 69.5
HPP92_021039 Vanilla planifolia HOM05D007031 ORTHO05D008815 9.3e-52 207.6 142 66.2
CAN.G1227.14 Capsicum annuum HOM05D007031 ORTHO05D008815 1.2e-51 207.2 141 67.4
CsaV3_5G004200 Cucumis sativus L. HOM05D007031 ORTHO05D008815 1.2e-51 207.2 141 70.2
arahy.Tifrunner.gnm1.ann1.R85P7C Arachis hypogaea HOM05D007031 ORTHO05D008815 1.6e-51 206.8 142 68.3
CiPaw.12G109600 Carya illinoinensis HOM05D007031 ORTHO05D008815 1.6e-51 206.8 143 69.9
arahy.Tifrunner.gnm1.ann1.WL6NYT Arachis hypogaea HOM05D007031 ORTHO05D008815 2.7e-51 206.1 142 67.6
CDE09G0628 Ceratophyllum demersum HOM05D005321 ORTHO05D006360 3.5e-51 205.7 136 70.6
Actinidia14432 Actinidia chinensis HOM05D007031 ORTHO05D008815 4.6e-51 205.3 142 68.3
PSO724G0679 Papaver somniferum HOM05D007031 ORTHO05D008815 4.6e-51 205.3 135 67.4
ECA232G3888 Erigeron canadensis HOM05D007031 ORTHO05D008815 6.0e-51 204.9 143 65.7
Psat2g177560 Pisum sativum HOM05D007031 ORTHO05D008815 1.7e-50 203.4 140 67.9
DCAR_027778 Daucus carota HOM05D007031 ORTHO05D008815 3.0e-50 202.6 137 67.9
CSS0002961 Camellia sinensis var. sinensis HOM05D007031 ORTHO05D008815 2.1e-48 196.4 150 62.7
ClCG01G004020 Citrullus lanatus HOM05D007031 ORTHO05D008815 2.8e-48 196.1 169 57.4
A01p20650 Brassica napus HOM05D007031 ORTHO05D008815 8.1e-48 194.5 120 76.7
C01p26150 Brassica napus HOM05D007031 ORTHO05D008815 1.1e-47 194.1 120 76.7
MBI04_g09491_MAGBIO Magnolia biondii HOM05D007031 ORTHO05D008815 2.4e-47 193.0 184 55.4
Hma1.2p1_0316F.1_g123210 Hydrangea macrophylla HOM05D007031 ORTHO05D008815 1.2e-46 190.7 119 72.3
Atru.chr9.1322 Acer truncatum HOM05D007031 ORTHO05D008815 3.4e-46 189.1 117 73.5
Sp7g15180 Schrenkiella parvula HOM05D007031 ORTHO05D008815 1.3e-45 187.2 150 64.7
MD04G1063700 Malus domestica HOM05D007031 ORTHO05D008815 1.7e-45 186.8 137 67.2
Peaxi162Scf00102g01143 Petunia axillaris HOM05D007031 ORTHO05D008815 3.8e-45 185.7 120 70.8
Os04g0535400 Oryza sativa ssp. japonica HOM05D007031 ORTHO05D008815 6.4e-45 184.9 137 61.3
ATR0317G125 Amborella trichopoda HOM05D007031 ORTHO05D008815 8.4e-45 184.5 140 61.4
EL10Ac5g13074 Beta vulgaris HOM05D007031 ORTHO05D008815 1.1e-44 184.1 174 54.0
BolC7t45328H Brassica oleracea HOM05D007031 ORTHO05D008815 1.4e-44 183.7 135 68.9
unitig_699.g19776 Utricularia gibba HOM05D007031 ORTHO05D008815 2.4e-44 183.0 117 70.1
SEGI_08804 Sequoiadendron giganteum HOM05D007031 ORTHO05D008815 7.1e-44 181.4 135 61.5
Manes.02G039100 Manihot esculenta HOM05D007031 ORTHO05D008815 6.0e-43 178.3 114 73.7
Sabra03G0047000 Salix brachista HOM05D007031 ORTHO05D008815 2.5e-41 172.9 159 56.6
vmacro16391 Vaccinium macrocarpon HOM05D007031 ORTHO05D008815 1.6e-40 170.2 109 70.6
QL12p012249 Quercus lobata HOM05D007031 ORTHO05D008815 4.8e-40 168.7 254 39.4
VMungo1215G1202 Vigna mungo HOM05D007031 ORTHO05D008815 8.1e-40 167.9 122 63.1
AUR62042788 Chenopodium quinoa HOM05D007031 ORTHO05D008815 9.0e-39 164.5 108 69.4
Hund14533 Selenicereus undatus HOM05D007031 ORTHO05D008815 1.2e-38 164.1 108 72.2
FAN14G5160 Fragaria x ananassa HOM05D007031 ORTHO05D008815 5.8e-38 161.8 145 57.9
MELO3C005535.2 Cucumis melo HOM05D007031 ORTHO05D008815 1.0e-37 161.0 101 74.3
C07p48030 Brassica napus HOM05D007337 ORTHO05D004972 6.0e-35 151.8 136 56.6
BcaC06g33496 Brassica carinata HOM05D007031 ORTHO05D008815 1.5e-33 147.1 126 62.7
A03p50000 Brassica napus HOM05D007337 ORTHO05D004972 1.5e-33 147.1 115 63.5
Prupe.5G068700 Prunus persica HOM05D007031 ORTHO05D008815 4.3e-33 145.6 140 55.7
Zm00001eb427450 Zea mays HOM05D007031 ORTHO05D008815 7.4e-33 144.8 101 61.4
CSS0026472 Camellia sinensis var. sinensis HOM05D007031 ORTHO05D008815 4.8e-32 142.1 147 49.7
AUR62007512 Chenopodium quinoa HOM05D007031 ORTHO05D008815 8.2e-32 141.4 89 70.8
CiPaw.11G153700 Carya illinoinensis HOM05D007031 ORTHO05D008815 3.1e-31 139.4 101 67.3
Pp3c5_26880 Physcomitrium patens HOM05D007031 ORTHO05D008815 3.1e-31 139.4 141 46.8
THA.LOC104815507 Tarenaya hassleriana HOM05D007031 ORTHO05D008815 5.3e-31 138.7 79 79.7
SMO274G0074 Selaginella moellendorffii HOM05D007031 ORTHO05D008815 4.5e-30 135.6 141 46.1
FAN02G0786 Fragaria x ananassa HOM05D007031 ORTHO05D008815 3.8e-29 132.5 107 63.6
Oeu062969.1 Olea europaea HOM05D007031 ORTHO05D008815 1.1e-28 131.0 141 45.4
GSVIVG01001319001 Vitis vinifera HOM05D007031 ORTHO05D008815 1.9e-28 130.2 89 70.8
Sc22g0000840 Simmondsia chinensis HOM05D007031 ORTHO05D008815 1.6e-27 127.1 79 74.7
FAN04G1478 Fragaria x ananassa HOM05D007031 ORTHO05D008815 2.7e-27 126.3 86 70.9
SMO134G0120 Selaginella moellendorffii HOM05D000076 ORTHO05D001279 7.9e-27 124.8 115 49.6
SalBow6G3941 Salvia bowleyana HOM05D007031 ORTHO05D008815 2.3e-26 123.2 99 60.6
Nn6g33971 Nelumbo nucifera HOM05D007031 ORTHO05D008815 6.7e-26 121.7 117 51.3
Nitab4.5_0000712g0190 Nicotiana tabacum HOM05D007031 ORTHO05D008815 2.2e-24 116.7 96 58.3
Haze_07923 Corylus avellana HOM05D007031 ORTHO05D008815 6.9e-23 111.7 156 41.0
Pp3c6_3420 Physcomitrium patens HOM05D029721 ORTHO05D008815 6.9e-23 111.7 124 47.6
MCO15G691 Micromonas commoda HOM05D007031 ORTHO05D008815 5.9e-22 108.6 144 38.9
Thecc.03G252200 Theobroma cacao HOM05D007031 ORTHO05D008815 1.0e-21 107.8 81 65.4
Cre03.g169200 Chlamydomonas reinhardtii HOM05D007031 ORTHO05D008815 2.5e-20 103.2 114 43.9
Medtr5g012525 Medicago truncatula HOM05D007031 ORTHO05D008815 1.8e-18 97.1 68 67.6
Nitab4.5_0002225g0110 Nicotiana tabacum HOM05D007031 ORTHO05D008815 5.1e-18 95.5 130 43.1
SEGI_18261 Sequoiadendron giganteum HOM05D007031 ORTHO05D008815 2.0e-17 93.6 85 55.3
FAN05G5584 Fragaria x ananassa HOM05D007031 ORTHO05D008815 4.5e-14 82.4 83 53.0
CDE04G2843 Ceratophyllum demersum HOM05D002397 ORTHO05D002667 5.7e-09 65.5 99 31.3
COL.COLO4_37184 Corchorus olitorius HOM05D007031 ORTHO05D008815 9.7e-09 64.7 45 73.3
AagrBONN_evm.TU.Sc2ySwM_344.2061 Anthoceros agrestis HOM05D002397 ORTHO05D002667 6.3e-08 62.0 104 29.8
Haze_26654 Corylus avellana HOM05D002397 ORTHO05D002667 1.1e-07 61.2 100 32.0
AUR62018472 Chenopodium quinoa HOM05D002397 ORTHO05D002667 1.4e-07 60.8 99 29.3
AUR62020952 Chenopodium quinoa HOM05D002397 ORTHO05D002667 2.4e-07 60.1 99 29.3
Zm00001eb015330 Zea mays HOM05D002397 ORTHO05D002667 2.4e-07 60.1 99 30.3
Haze_07922 Corylus avellana HOM05D007031 ORTHO05D008815 4.1e-07 59.3 38 71.1
TAR633G1153 Trochodendron aralioides HOM05D002397 ORTHO05D002667 4.1e-07 59.3 99 29.3
MSTRG.19749 Avicennia marina HOM05D002397 ORTHO05D002667 5.3e-07 58.9 99 30.3
Thecc.05G119600 Theobroma cacao HOM05D002397 ORTHO05D002667 5.3e-07 58.9 99 28.3
Manes.08G065600 Manihot esculenta HOM05D002397 ORTHO05D002667 7.0e-07 58.5 99 29.3
AagrBONN_evm.TU.Sc2ySwM_228.4317 Anthoceros agrestis HOM05D002397 ORTHO05D002667 9.1e-07 58.2 104 28.8
Os03g0322500 Oryza sativa ssp. japonica HOM05D002397 ORTHO05D002667 1.2e-06 57.8 99 29.3
SEGI_32624 Sequoiadendron giganteum HOM05D002397 ORTHO05D002667 1.2e-06 57.8 107 28.0
ECA247G1191 Erigeron canadensis HOM05D002397 ORTHO05D000004 1.5e-06 57.4 99 29.3
Sc24g0002730 Simmondsia chinensis HOM05D002397 ORTHO05D002667 1.5e-06 57.4 100 33.0
arahy.Tifrunner.gnm1.ann1.QE9US8 Arachis hypogaea HOM05D002397 ORTHO05D002667 2.0e-06 57.0 104 31.7
Nn7g38244 Nelumbo nucifera HOM05D002397 ORTHO05D002667 2.0e-06 57.0 99 29.3
PSO017G1677 Papaver somniferum HOM05D002397 ORTHO05D002667 2.0e-06 57.0 99 30.3
Sabra16G0022200 Salix brachista HOM05D002397 ORTHO05D002667 2.0e-06 57.0 104 29.8
Duzib128G0560 Durio zibethinus HOM05D002397 ORTHO05D002667 2.6e-06 56.6 99 28.3
Potri.016G023700 Populus trichocarpa HOM05D002397 ORTHO05D002667 2.6e-06 56.6 104 29.8
GSVIVG01029893001 Vitis vinifera HOM05D002397 ORTHO05D002667 2.6e-06 56.6 100 31.0
Actinidia18377 Actinidia chinensis HOM05D002397 ORTHO05D002667 3.5e-06 56.2 99 28.3
CiPaw.10G121200 Carya illinoinensis HOM05D002397 ORTHO05D002667 3.5e-06 56.2 99 27.3
Cre06.g273000 Chlamydomonas reinhardtii HOM05D002397 ORTHO05D002667 3.5e-06 56.2 107 29.0
Ciclev10013010m.g Citrus clementina HOM05D002397 ORTHO05D002667 3.5e-06 56.2 99 28.3
Lsat_1_v5_gn_9_31660 Lactuca sativa HOM05D002397 ORTHO05D002667 3.5e-06 56.2 99 29.3
Sabra16G0029900 Salix brachista HOM05D002397 ORTHO05D002667 3.5e-06 56.2 104 29.8
Hund14535 Selenicereus undatus HOM05D007031 ORTHO05D008815 3.5e-06 56.2 39 64.1
TAR629G2980 Trochodendron aralioides HOM05D002397 ORTHO05D002667 3.5e-06 56.2 106 28.3
HPP92_004188 Vanilla planifolia HOM05D002397 ORTHO05D002667 3.5e-06 56.2 99 30.3
CDE02G1632 Ceratophyllum demersum HOM05D002397 ORTHO05D002667 4.5e-06 55.8 100 33.0
DCAR_009104 Daucus carota HOM05D002397 ORTHO05D002667 4.5e-06 55.8 106 26.4
HanXRQChr17g0539621 Helianthus annuus HOM05D002397 ORTHO05D002667 4.5e-06 55.8 100 31.0
PSO675G0625 Papaver somniferum HOM05D002397 ORTHO05D002667 4.5e-06 55.8 99 30.3
SMO364G0871 Selaginella moellendorffii HOM05D002397 ORTHO05D002667 4.5e-06 55.8 98 28.6
SGA_v2.0_scaffold66G22344 Striga asiatica HOM05D002397 ORTHO05D002667 4.5e-06 55.8 106 27.4
Atru.chr10.561 Acer truncatum HOM05D002397 ORTHO05D002667 5.9e-06 55.5 99 30.3
Ah.04g149930 Amaranthus hybridus HOM05D002397 ORTHO05D002667 5.9e-06 55.5 99 27.3
Ca_04449_v3 Cicer arietinum L. HOM05D002397 ORTHO05D002667 5.9e-06 55.5 99 27.3
HanXRQChr10g0298541 Helianthus annuus HOM05D002397 ORTHO05D002667 5.9e-06 55.5 100 31.0
Peaxi162Scf00149g00222 Petunia axillaris HOM05D002397 ORTHO05D002667 5.9e-06 55.5 99 29.3
Psat1g087400 Pisum sativum HOM05D002397 ORTHO05D002667 5.9e-06 55.5 99 27.3
TWI77G0694 Tripterygium wilfordii HOM05D002397 ORTHO05D002667 5.9e-06 55.5 99 27.3
DCAR_001310 Daucus carota HOM05D002397 ORTHO05D009673 7.7e-06 55.1 106 27.4
Lalb_Chr14g0365161 Lupinus albus HOM05D002397 ORTHO05D002667 7.7e-06 55.1 99 27.3
SMO270G0132 Selaginella moellendorffii HOM05D002397 ORTHO05D002667 7.7e-06 55.1 100 29.0


User provided reference genes

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