Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aa31LG2G12620 Aethionema arabicum HOM05D006632 ORTHO05D008224 2.7e-129 465.3 233 100.0
Carub.0007s2499 Capsella rubella HOM05D006632 ORTHO05D008224 2.4e-109 399.1 234 84.2
Sp7g15070 Schrenkiella parvula HOM05D006632 ORTHO05D008224 4.5e-108 394.8 227 85.0
CARHR222910 Cardamine hirsuta HOM05D006632 ORTHO05D008224 7.8e-108 394.0 226 85.4
AL7G38450 Arabidopsis lyrata HOM05D006632 ORTHO05D008224 1.3e-107 393.3 227 85.9
AT4G16510 Arabidopsis thaliana HOM05D006632 ORTHO05D008224 1.7e-107 392.9 232 83.6
A08p12540 Brassica napus HOM05D006632 ORTHO05D008224 9.5e-106 387.1 224 84.8
BraA08t33245Z Brassica rapa HOM05D006632 ORTHO05D008224 9.5e-106 387.1 224 84.8
Thhalv10026162m.g Eutrema salsugineum HOM05D006632 ORTHO05D008224 9.5e-106 387.1 228 85.1
BolC8t48376H Brassica oleracea HOM05D006632 ORTHO05D008224 1.0e-104 383.6 224 83.9
Gohir.D12G222100 Gossypium hirsutum HOM05D006632 ORTHO05D008224 4.0e-96 355.1 229 77.3
Gorai.008G238100 Gossypium raimondii HOM05D006632 ORTHO05D008224 2.6e-95 352.4 229 76.9
Cfa012746 Carpinus fangiana HOM05D006632 ORTHO05D008224 9.8e-95 350.5 226 74.3
CANSAT21G1011 Cannabis sativa HOM05D006632 ORTHO05D008224 2.2e-94 349.4 226 75.7
Gohir.A12G219900 Gossypium hirsutum HOM05D006632 ORTHO05D008224 2.9e-94 349.0 229 76.4
Solyc08g007410.4 Solanum lycopersicum HOM05D006632 ORTHO05D008224 1.9e-93 346.3 222 75.7
THA.LOC104814709 Tarenaya hassleriana HOM05D006632 ORTHO05D008224 1.9e-93 346.3 230 77.0
Sopen08g003360 Solanum pennellii HOM05D006632 ORTHO05D008224 4.1e-93 345.1 224 75.0
Potri.008G135980 Populus trichocarpa HOM05D006632 ORTHO05D008224 7.0e-93 344.4 226 73.9
Thecc.03G254100 Theobroma cacao HOM05D006632 ORTHO05D008224 9.2e-93 344.0 223 74.9
Duzib205G0315 Durio zibethinus HOM05D006632 ORTHO05D008224 1.6e-92 343.2 231 73.6
Potri.003G111100 Populus trichocarpa HOM05D006632 ORTHO05D008224 2.0e-92 342.8 227 73.6
Haze_07882 Corylus avellana HOM05D006632 ORTHO05D008224 4.6e-92 341.7 221 74.2
TWI81G0482 Tripterygium wilfordii HOM05D006632 ORTHO05D008224 7.8e-92 340.9 232 72.4
PGSC0003DMG400012506 Solanum tuberosum HOM05D006632 ORTHO05D008224 6.6e-91 337.8 224 72.8
VMungo0251G2371 Vigna mungo HOM05D006632 ORTHO05D008224 8.6e-91 337.4 225 72.4
Ciclev10022042m.g Citrus clementina HOM05D006632 ORTHO05D008224 1.1e-90 337.0 233 72.1
BcaC07g37993 Brassica carinata HOM05D006632 ORTHO05D008224 3.3e-90 335.5 197 83.8
FAN18G2132 Fragaria x ananassa HOM05D006632 ORTHO05D008224 3.3e-90 335.5 225 74.7
Atru.chr9.1340 Acer truncatum HOM05D006632 ORTHO05D008224 7.3e-90 334.3 230 71.7
Glyma.05G058200 Glycine max HOM05D006632 ORTHO05D008224 7.3e-90 334.3 225 72.4
CiPaw.11G152400 Carya illinoinensis HOM05D006632 ORTHO05D008224 1.2e-89 333.6 229 72.1
Hma1.2p1_0916F.1_g236520 Hydrangea macrophylla HOM05D006632 ORTHO05D008224 1.6e-89 333.2 230 73.0
Prupe.5G072600 Prunus persica HOM05D006632 ORTHO05D008224 2.1e-89 332.8 230 71.3
MELO3C013948.2 Cucumis melo HOM05D006632 ORTHO05D008224 4.7e-89 331.6 236 71.2
RcHm_v2.0_Chr7g0202881 Rosa chinensis HOM05D006632 ORTHO05D008224 4.7e-89 331.6 226 73.0
Manes.01G079200 Manihot esculenta HOM05D006632 ORTHO05D008224 6.2e-89 331.3 234 70.1
ClCG10G002780 Citrullus lanatus HOM05D006632 ORTHO05D008224 8.1e-89 330.9 235 69.8
Lalb_Chr05g0225741 Lupinus albus HOM05D006632 ORTHO05D008224 1.8e-88 329.7 227 71.4
GSVIVG01001305001 Vitis vinifera HOM05D006632 ORTHO05D008224 2.3e-88 329.3 227 70.9
arahy.Tifrunner.gnm1.ann1.UQJ0AM Arachis hypogaea HOM05D006632 ORTHO05D008224 4.0e-88 328.6 222 72.5
Oeu062975.1 Olea europaea HOM05D006632 ORTHO05D008224 4.0e-88 328.6 228 71.5
arahy.Tifrunner.gnm1.ann1.E5X9TE Arachis hypogaea HOM05D006632 ORTHO05D008224 5.2e-88 328.2 222 72.5
Phvul.003G219500 Phaseolus vulgaris HOM05D006632 ORTHO05D008224 1.2e-87 327.0 225 69.8
Cc08_g12700 Coffea canephora HOM05D006632 ORTHO05D008224 1.5e-87 326.6 230 70.4
Sed0019633 Sechium edule HOM05D006632 ORTHO05D008224 1.5e-87 326.6 225 71.1
FAN04G0341 Fragaria x ananassa HOM05D006632 ORTHO05D008224 5.8e-87 324.7 232 70.3
Nitab4.5_0000312g0210 Nicotiana tabacum HOM05D006632 ORTHO05D008224 5.8e-87 324.7 222 73.0
FAN08G0873 Fragaria x ananassa HOM05D006632 ORTHO05D008224 9.8e-87 323.9 232 71.1
TPR.G37669 Trifolium pratense HOM05D006632 ORTHO05D008224 9.8e-87 323.9 225 69.3
Sabra03G0077000 Salix brachista HOM05D006632 ORTHO05D008224 1.3e-86 323.6 266 63.5
Lsat_1_v5_gn_6_91561 Lactuca sativa HOM05D006632 ORTHO05D008224 1.7e-86 323.2 221 72.9
Psat4g070160 Pisum sativum HOM05D006632 ORTHO05D008224 2.2e-86 322.8 226 69.5
DCAR_027784 Daucus carota HOM05D006632 ORTHO05D008224 2.9e-86 322.4 235 68.1
CSS0044555 Camellia sinensis var. sinensis HOM05D006632 ORTHO05D008224 3.7e-86 322.0 241 69.3
Nn6g34002 Nelumbo nucifera HOM05D006632 ORTHO05D008224 4.9e-86 321.6 227 71.4
Lj4g0001078 Lotus japonicus HOM05D006632 ORTHO05D008224 6.4e-86 321.2 226 70.4
PGR042G2887 Punica granatum HOM05D006632 ORTHO05D008224 1.1e-85 320.5 231 69.3
Actinidia05199 Actinidia chinensis HOM05D006632 ORTHO05D008224 1.4e-85 320.1 230 68.7
HanXRQChr03g0088651 Helianthus annuus HOM05D006632 ORTHO05D008224 1.9e-85 319.7 216 72.7
Medtr4g101100 Medicago truncatula HOM05D006632 ORTHO05D008224 1.9e-85 319.7 232 69.0
FAN13G0450 Fragaria x ananassa HOM05D006632 ORTHO05D008224 4.1e-85 318.5 255 65.9
Rhsim07G0107100 Rhododendron simsii HOM05D006632 ORTHO05D008224 5.4e-85 318.2 230 70.4
PSO063G6697 Papaver somniferum HOM05D006632 ORTHO05D008224 1.2e-84 317.0 230 67.0
Nitab4.5_0004059g0060 Nicotiana tabacum HOM05D006632 ORTHO05D008224 1.6e-84 316.6 241 66.4
Lj2A215T22 Lonicera japonica HOM05D006632 ORTHO05D008224 2.1e-84 316.2 223 67.7
Nitab4.5_0001707g0010 Nicotiana tabacum HOM05D006632 ORTHO05D008224 3.5e-84 315.5 238 65.5
PSO782G3692 Papaver somniferum HOM05D006632 ORTHO05D008224 1.3e-83 313.5 230 65.7
CsaV3_3G002820 Cucumis sativus L. HOM05D006632 ORTHO05D008224 2.3e-83 312.8 194 75.3
Migut.A00961 Erythranthe guttata HOM05D006632 ORTHO05D008224 2.5e-82 309.3 236 66.5
Eucgr.E00435 Eucalyptus grandis HOM05D006632 ORTHO05D008224 2.5e-82 309.3 237 66.2
ECA240G2825 Erigeron canadensis HOM05D006632 ORTHO05D008224 7.3e-82 307.8 218 69.3
vmacro14091 Vaccinium macrocarpon HOM05D006632 ORTHO05D008224 2.1e-81 306.2 273 59.3
MD06G1061300 Malus domestica HOM05D006632 ORTHO05D008224 1.4e-80 303.5 230 65.7
MSTRG.25531 Avicennia marina HOM05D006632 ORTHO05D008224 1.8e-80 303.1 226 67.7
Ah.12g056690 Amaranthus hybridus HOM05D006632 ORTHO05D008224 5.2e-80 301.6 221 67.0
Aqoxy5G03914 Aquilegia oxysepala HOM05D006632 ORTHO05D008224 6.8e-80 301.2 223 66.8
CAN.G1227.10 Capsicum annuum HOM05D006632 ORTHO05D008224 1.2e-79 300.4 174 79.3
AUR62039953 Chenopodium quinoa HOM05D006632 ORTHO05D008224 1.2e-79 300.4 218 69.3
HPP92_014478 Vanilla planifolia HOM05D006632 ORTHO05D008224 4.4e-79 298.5 226 65.5
Rhsim07G0106500 Rhododendron simsii HOM05D006632 ORTHO05D008224 1.7e-78 296.6 297 55.6
EL10Ac5g13049 Beta vulgaris HOM05D006632 ORTHO05D008224 3.8e-78 295.4 220 68.2
AUR62007500 Chenopodium quinoa HOM05D006632 ORTHO05D008224 1.1e-77 293.9 219 66.7
unitig_27.g25096 Utricularia gibba HOM05D006632 ORTHO05D008224 1.6e-76 290.0 181 72.4
Os02g0662200 Oryza sativa ssp. japonica HOM05D006632 ORTHO05D008224 2.1e-76 289.7 231 62.8
CDE02G1947 Ceratophyllum demersum HOM05D006632 ORTHO05D008224 4.6e-76 288.5 182 74.2
SGA_v2.0_scaffold120G32870 Striga asiatica HOM05D006632 ORTHO05D008224 1.6e-73 280.0 287 54.0
SEGI_31519 Sequoiadendron giganteum HOM05D006632 ORTHO05D008224 1.8e-72 276.6 221 62.0
Zm00001eb249830 Zea mays HOM05D006632 ORTHO05D008224 2.4e-72 276.2 230 61.3
Dinv21617 Davidia involucrata HOM05D006632 ORTHO05D008224 2.0e-71 273.1 222 64.0
Sc01g0008570 Simmondsia chinensis HOM05D006632 ORTHO05D008224 2.7e-68 262.7 160 75.6
Mapoly0121s0036 Marchantia polymorpha HOM05D006632 ORTHO05D008224 1.0e-67 260.8 184 66.3
SMO143G0241 Selaginella moellendorffii HOM05D006632 ORTHO05D008224 3.0e-67 259.2 178 65.7
Pp3c24_4050 Physcomitrium patens HOM05D006632 ORTHO05D008224 3.9e-67 258.8 244 54.9
Peaxi162Scf00102g01151 Petunia axillaris HOM05D006632 ORTHO05D008224 2.5e-66 256.1 227 58.6
QL12p012693 Quercus lobata HOM05D006632 ORTHO05D008224 7.3e-66 254.6 185 69.7
MD00G1115100 Malus domestica HOM05D006632 ORTHO05D008224 1.6e-65 253.4 245 57.1
Hund14588 Selenicereus undatus HOM05D006632 ORTHO05D008224 1.8e-64 250.0 379 41.2
Nitab4.5_0017825g0010 Nicotiana tabacum HOM05D006632 ORTHO05D008224 8.4e-62 241.1 185 65.9
CBR_g26463 Chara braunii HOM05D006632 ORTHO05D008224 3.9e-59 232.3 186 59.7
DCAR_004945 Daucus carota HOM05D006632 ORTHO05D008224 7.4e-58 228.0 229 54.1
SalBow6G7145 Salvia bowleyana HOM05D006632 ORTHO05D008224 4.8e-49 198.7 151 70.2
Cre07.g338250 Chlamydomonas reinhardtii HOM05D006632 ORTHO05D008224 1.5e-47 193.7 203 45.8
Ca_21955_v3 Cicer arietinum L. HOM05D006632 ORTHO05D008224 2.6e-47 193.0 152 65.8
Ca_22220_v3 Cicer arietinum L. HOM05D006632 ORTHO05D008224 4.5e-47 192.2 161 62.7
C01p26240 Brassica napus HOM05D006632 ORTHO05D008224 1.2e-44 184.1 133 71.4
BolC1t02568H Brassica oleracea HOM05D006632 ORTHO05D008224 1.2e-44 184.1 133 71.4
ATR0564G418 Amborella trichopoda HOM05D006632 ORTHO05D008224 6.3e-41 171.8 161 59.0
MCO15G182 Micromonas commoda HOM05D006632 ORTHO05D008224 1.2e-36 157.5 179 45.8
PRCOL_00001140 Prasinoderma coloniale HOM05D006632 ORTHO05D008224 5.1e-35 152.1 170 44.7
BraA01t02010Z Brassica rapa HOM05D006632 ORTHO05D008224 1.5e-34 150.6 150 56.0
A01p20910 Brassica napus HOM05D006632 ORTHO05D008224 1.3e-33 147.5 150 55.3
Dinv39125 Davidia involucrata HOM05D006632 ORTHO05D008224 3.1e-32 142.9 136 58.8
AagrBONN_evm.TU.Sc2ySwM_117.1014 Anthoceros agrestis HOM05D006632 ORTHO05D008224 2.4e-24 116.7 174 43.1
FvH4_5g00080 Fragaria vesca HOM05D011292 ORTHO05D013599 1.0e-22 111.3 104 61.5
Cpa.g.sc276.6 Carica papaya HOM05D006632 ORTHO05D008224 2.9e-22 109.8 108 59.3
Peaxi162Scf00002g00156 Petunia axillaris HOM05D006632 ORTHO05D008224 3.2e-21 106.3 78 64.1
Duzib068G0053 Durio zibethinus HOM05D006632 ORTHO05D008224 1.5e-18 97.4 54 79.6
TAR636G0287 Trochodendron aralioides HOM05D006632 ORTHO05D008224 2.4e-16 90.1 99 54.5
DCAR_004944 Daucus carota HOM05D006632 ORTHO05D008224 1.7e-14 84.0 101 51.5
Sabra01G0094400 Salix brachista HOM05D006632 ORTHO05D008224 2.0e-10 70.5 45 66.7
Potri.001G122501 Populus trichocarpa HOM05D006632 ORTHO05D008224 4.4e-10 69.3 53 60.4


User provided reference genes

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