Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aa31LG2G12250 Aethionema arabicum HOM05D007323 ORTHO05D009238 1.6e-124 449.5 233 100.0
AL4G18960 Arabidopsis lyrata HOM05D007323 ORTHO05D009238 1.5e-87 326.6 218 80.3
Sp4g06990 Schrenkiella parvula HOM05D007323 ORTHO05D009238 5.4e-85 318.2 218 80.7
Carub.0004s0625 Capsella rubella HOM05D007323 ORTHO05D009238 1.0e-83 313.9 235 75.3
BcaC07g40825 Brassica carinata HOM05D007323 ORTHO05D009238 1.5e-82 310.1 218 76.6
C08p38170 Brassica napus HOM05D007323 ORTHO05D009238 1.5e-82 310.1 218 76.6
BolC8t51392H Brassica oleracea HOM05D007323 ORTHO05D009238 1.5e-82 310.1 218 76.6
AT2G26340 Arabidopsis thaliana HOM05D007323 ORTHO05D009238 2.5e-82 309.3 219 77.6
Thhalv10002091m.g Eutrema salsugineum HOM05D007323 ORTHO05D009238 1.8e-80 303.1 221 77.4
A09p55240 Brassica napus HOM05D007323 ORTHO05D009238 5.2e-80 301.6 222 74.8
BraA09t40931Z Brassica rapa HOM05D007323 ORTHO05D009238 7.6e-79 297.7 220 74.5
BcaB08g35255 Brassica carinata HOM05D007323 ORTHO05D009238 1.1e-77 293.9 220 73.6
CARHR118450 Cardamine hirsuta HOM05D007323 ORTHO05D009238 4.0e-72 275.4 172 85.5
THA.LOC104819519 Tarenaya hassleriana HOM05D007323 ORTHO05D009238 8.9e-72 274.2 207 74.4
A09p54710 Brassica napus HOM05D007323 ORTHO05D009238 6.2e-65 251.5 171 77.8
Duzib150G1239 Durio zibethinus HOM05D007323 ORTHO05D009238 1.1e-61 240.7 205 62.4
CANSAT25G3877 Cannabis sativa HOM05D007323 ORTHO05D009238 2.4e-61 239.6 225 57.8
Ciclev10009314m.g Citrus clementina HOM05D007323 ORTHO05D009238 2.4e-61 239.6 212 61.8
Gorai.001G020100 Gossypium raimondii HOM05D007323 ORTHO05D009238 2.1e-60 236.5 225 58.2
COL.COLO4_21139 Corchorus olitorius HOM05D007323 ORTHO05D009238 3.5e-60 235.7 215 57.2
Lj1g0021270 Lotus japonicus HOM05D007323 ORTHO05D009238 4.6e-60 235.3 221 57.9
Thecc.09G063400 Theobroma cacao HOM05D007323 ORTHO05D009238 7.9e-60 234.6 224 56.2
PGR031G0894 Punica granatum HOM05D007323 ORTHO05D009238 3.9e-59 232.3 212 59.4
FAN27G1709 Fragaria x ananassa HOM05D007323 ORTHO05D009238 5.1e-59 231.9 237 57.4
Ca_15835_v3 Cicer arietinum L. HOM05D007323 ORTHO05D009238 1.1e-58 230.7 221 55.7
Gohir.D07G019400 Gossypium hirsutum HOM05D007323 ORTHO05D009238 1.1e-58 230.7 225 57.3
TWI34G0887 Tripterygium wilfordii HOM05D007323 ORTHO05D009238 1.1e-58 230.7 221 54.8
FAN20G2477 Fragaria x ananassa HOM05D007323 ORTHO05D009238 1.5e-58 230.3 237 57.4
CiPaw.16G068300 Carya illinoinensis HOM05D007323 ORTHO05D009238 3.3e-58 229.2 225 56.4
FvH4_2g30980 Fragaria vesca HOM05D007323 ORTHO05D009238 3.3e-58 229.2 236 56.8
FAN24G0989 Fragaria x ananassa HOM05D007323 ORTHO05D009238 5.6e-58 228.4 236 56.8
RcHm_v2.0_Chr6g0311811 Rosa chinensis HOM05D007323 ORTHO05D009238 5.6e-58 228.4 235 57.9
Lalb_Chr08g0244811 Lupinus albus HOM05D007323 ORTHO05D009238 1.6e-57 226.9 219 55.3
VMungo1309G0522 Vigna mungo HOM05D007323 ORTHO05D009238 2.1e-57 226.5 221 54.8
Sed0017686 Sechium edule HOM05D007323 ORTHO05D009238 2.8e-57 226.1 222 56.8
Glyma.06G055900 Glycine max HOM05D007323 ORTHO05D009238 3.7e-57 225.7 209 56.5
Gohir.A07G019600 Gossypium hirsutum HOM05D007323 ORTHO05D009238 3.7e-57 225.7 206 59.2
Nn8g38659 Nelumbo nucifera HOM05D007323 ORTHO05D009238 8.1e-57 224.6 210 60.0
Phvul.009G082000 Phaseolus vulgaris HOM05D007323 ORTHO05D009238 1.1e-56 224.2 221 53.8
Cfa017873 Carpinus fangiana HOM05D007323 ORTHO05D009238 2.4e-56 223.0 225 57.3
Eucgr.B01965 Eucalyptus grandis HOM05D007323 ORTHO05D009238 2.4e-56 223.0 199 60.8
MD15G1049800 Malus domestica HOM05D007323 ORTHO05D009238 9.0e-56 221.1 243 54.3
Medtr3g105050 Medicago truncatula HOM05D007323 ORTHO05D009238 9.0e-56 221.1 215 54.9
TPR.G3557 Trifolium pratense HOM05D007323 ORTHO05D009238 2.6e-55 219.5 201 58.7
MELO3C011483.2 Cucumis melo HOM05D007323 ORTHO05D009238 1.3e-54 217.2 221 54.3
Manes.16G085700 Manihot esculenta HOM05D007323 ORTHO05D009238 1.7e-54 216.9 213 56.8
Sabra06G0170600 Salix brachista HOM05D007323 ORTHO05D009238 2.2e-54 216.5 211 57.8
Prupe.1G404100 Prunus persica HOM05D007323 ORTHO05D009238 2.9e-54 216.1 243 54.7
QL02p017014 Quercus lobata HOM05D007323 ORTHO05D009238 3.8e-54 215.7 202 58.9
CsaV3_6G031970 Cucumis sativus L. HOM05D007323 ORTHO05D009238 4.9e-54 215.3 221 54.3
arahy.Tifrunner.gnm1.ann1.7DEW7H Arachis hypogaea HOM05D007323 ORTHO05D009238 6.4e-54 214.9 214 56.1
ClCG08G009880 Citrullus lanatus HOM05D007323 ORTHO05D009238 6.4e-54 214.9 221 53.8
Potri.006G220800 Populus trichocarpa HOM05D007323 ORTHO05D009238 1.4e-53 213.8 211 57.8
Dinv41843 Davidia involucrata HOM05D007323 ORTHO05D009238 7.1e-53 211.5 225 53.8
Sc06g0001110 Simmondsia chinensis HOM05D007323 ORTHO05D009238 2.1e-52 209.9 199 55.3
Atru.chr7.1847 Acer truncatum HOM05D007323 ORTHO05D009238 3.5e-52 209.1 174 64.9
MSTRG.25986 Avicennia marina HOM05D007323 ORTHO05D009238 1.3e-51 207.2 205 53.2
Cc08_g01150 Coffea canephora HOM05D007323 ORTHO05D009238 2.3e-51 206.5 206 55.3
Sopen08g017220 Solanum pennellii HOM05D007323 ORTHO05D009238 3.9e-51 205.7 210 55.2
Nitab4.5_0002831g0040 Nicotiana tabacum HOM05D007323 ORTHO05D009238 8.7e-51 204.5 232 53.0
Lsat_1_v5_gn_5_79461 Lactuca sativa HOM05D007323 ORTHO05D009238 1.1e-50 204.1 222 49.1
GSVIVG01035470001 Vitis vinifera HOM05D007323 ORTHO05D009238 1.5e-50 203.8 172 61.6
CDE05G0862 Ceratophyllum demersum HOM05D007323 ORTHO05D009238 1.9e-50 203.4 196 57.1
Migut.A00078 Erythranthe guttata HOM05D007323 ORTHO05D009238 1.9e-50 203.4 221 52.9
vmacro05236 Vaccinium macrocarpon HOM05D007323 ORTHO05D009238 2.5e-50 203.0 172 62.2
HanXRQChr10g0309971 Helianthus annuus HOM05D007323 ORTHO05D009238 3.3e-50 202.6 208 52.4
Aqoxy7G01049 Aquilegia oxysepala HOM05D007323 ORTHO05D009238 4.3e-50 202.2 199 57.3
Nitab4.5_0000446g0180 Nicotiana tabacum HOM05D007323 ORTHO05D009238 4.3e-50 202.2 232 52.6
Actinidia03545 Actinidia chinensis HOM05D007323 ORTHO05D009238 5.6e-50 201.8 210 54.3
Haze_18294 Corylus avellana HOM05D007323 ORTHO05D009238 5.6e-50 201.8 258 47.7
arahy.Tifrunner.gnm1.ann1.287SRD Arachis hypogaea HOM05D007323 ORTHO05D009238 1.6e-49 200.3 221 52.0
Rhsim10G0107900 Rhododendron simsii HOM05D007323 ORTHO05D009238 1.6e-49 200.3 173 61.3
unitig_8.g4975 Utricularia gibba HOM05D007323 ORTHO05D009238 2.1e-49 199.9 211 55.9
SGA_v2.0_scaffold20G09163 Striga asiatica HOM05D007323 ORTHO05D009238 3.7e-49 199.1 210 52.9
ECA234G0604 Erigeron canadensis HOM05D007323 ORTHO05D009238 4.8e-49 198.7 197 54.3
Hund03297 Selenicereus undatus HOM05D007323 ORTHO05D009238 5.3e-48 195.3 209 51.7
HPP92_024332 Vanilla planifolia HOM05D007323 ORTHO05D009238 6.9e-48 194.9 212 51.9
PSO063G6894 Papaver somniferum HOM05D007323 ORTHO05D009238 9.0e-48 194.5 205 52.7
EL10Ac2g03780 Beta vulgaris HOM05D007323 ORTHO05D009238 4.5e-47 192.2 205 50.7
ATR0598G133 Amborella trichopoda HOM05D007323 ORTHO05D009238 1.3e-46 190.7 176 58.5
DCAR_007767 Daucus carota HOM05D007323 ORTHO05D009238 1.3e-46 190.7 208 53.8
PSO421G0353 Papaver somniferum HOM05D007323 ORTHO05D009238 2.9e-46 189.5 218 49.5
Os03g0176700 Oryza sativa ssp. japonica HOM05D007323 ORTHO05D009238 4.9e-46 188.7 195 54.9
Psat5g030560 Pisum sativum HOM05D007323 ORTHO05D009238 5.5e-45 185.3 174 54.0
Zm00001eb005760 Zea mays HOM05D007323 ORTHO05D009238 5.5e-45 185.3 181 57.5
Pp3c4_13280 Physcomitrium patens HOM05D007323 ORTHO05D009238 3.7e-41 172.6 194 46.9
AagrBONN_evm.TU.Sc2ySwM_228.4439 Anthoceros agrestis HOM05D007323 ORTHO05D009238 6.3e-41 171.8 161 56.5
SEGI_00918 Sequoiadendron giganteum HOM05D007323 ORTHO05D009238 9.0e-40 167.9 171 52.0
AUR62009079 Chenopodium quinoa HOM05D007323 ORTHO05D009238 3.4e-39 166.0 166 55.4
Eucgr.B01870 Eucalyptus grandis HOM05D007323 ORTHO05D009238 1.8e-35 153.7 137 62.0
SMO239G0030 Selaginella moellendorffii HOM05D007323 ORTHO05D009238 6.7e-35 151.8 227 42.7
Mapoly0001s0019 Marchantia polymorpha HOM05D007323 ORTHO05D009238 3.7e-33 146.0 170 46.5
TAR636G1368 Trochodendron aralioides HOM05D007323 ORTHO05D009238 1.1e-32 144.4 147 53.7
Peaxi162Scf00486g01025 Petunia axillaris HOM05D007323 ORTHO05D009238 2.6e-31 139.8 149 52.3
AUR62020587 Chenopodium quinoa HOM05D007323 ORTHO05D009238 4.5e-31 139.0 140 55.0
CBR_g19268 Chara braunii HOM05D007323 ORTHO05D009238 4.8e-25 119.0 172 38.4
Cpa.g.sc126.24 Carica papaya HOM05D007323 ORTHO05D009238 8.2e-25 118.2 106 60.4
MBI13_g42814_MAGBIO Magnolia biondii HOM05D007323 ORTHO05D009238 4.1e-24 115.9 356 30.1
CSS0001075 Camellia sinensis var. sinensis HOM05D007323 ORTHO05D009238 8.0e-20 101.7 106 54.7
CSS0018719 Camellia sinensis var. sinensis HOM05D007323 ORTHO05D009238 8.0e-20 101.7 106 54.7
MD08G1071400 Malus domestica HOM05D007323 ORTHO05D009238 4.1e-16 89.4 64 71.9
Cre16.g684150 Chlamydomonas reinhardtii HOM05D007323 ORTHO05D009238 9.1e-16 88.2 169 34.3
Solyc08g061800.3 Solanum lycopersicum HOM05D007323 ORTHO05D009238 1.3e-09 67.8 70 55.7
Os03g0176800 Oryza sativa ssp. japonica HOM05D009542 ORTHO05D294036 1.7e-09 67.4 132 35.6


User provided reference genes

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