Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aa31LG2G11600 Aethionema arabicum HOM05D007336 ORTHO05D009339 1.5e-65 252.7 127 100.0
Thhalv10023757m.g Eutrema salsugineum HOM05D007336 ORTHO05D009339 6.6e-53 210.7 125 84.0
BcaB04g20156 Brassica carinata HOM05D007336 ORTHO05D009339 3.3e-52 208.4 127 83.5
C01p35170 Brassica napus HOM05D007336 ORTHO05D009339 1.6e-51 206.1 128 83.6
BolC1t03475H Brassica oleracea HOM05D007336 ORTHO05D009339 1.6e-51 206.1 128 83.6
A01p27330 Brassica napus HOM05D007336 ORTHO05D009339 2.1e-51 205.7 128 82.8
BraA01t02872Z Brassica rapa HOM05D007336 ORTHO05D009339 2.1e-51 205.7 128 82.8
Sp2g06650 Schrenkiella parvula HOM05D007336 ORTHO05D009339 3.1e-50 201.8 127 81.9
AL1G65880 Arabidopsis lyrata HOM05D007336 ORTHO05D009339 2.6e-49 198.7 127 80.3
BcaC09g49567 Brassica carinata HOM05D007336 ORTHO05D009339 2.2e-48 195.7 128 81.2
AT1G56260 Arabidopsis thaliana HOM05D007336 ORTHO05D009339 4.9e-48 194.5 128 79.7
CARHR289820 Cardamine hirsuta HOM05D007336 ORTHO05D009339 1.4e-47 193.0 127 77.2
THA.LOC104805904 Tarenaya hassleriana HOM05D007336 ORTHO05D009339 6.6e-45 184.1 125 72.0
Carub.0002s0790 Capsella rubella HOM05D007336 ORTHO05D009339 1.3e-43 179.9 129 74.4
CiPaw.08G158700 Carya illinoinensis HOM05D007336 ORTHO05D009339 2.1e-38 162.5 115 66.1
Aqoxy2G02873 Aquilegia oxysepala HOM05D007336 ORTHO05D009339 4.6e-38 161.4 121 62.8
COL.COLO4_03798 Corchorus olitorius HOM05D007336 ORTHO05D009339 6.0e-38 161.0 115 67.8
TAR362G0973 Trochodendron aralioides HOM05D007336 ORTHO05D009339 7.9e-38 160.6 115 68.7
Duzib128G0390 Durio zibethinus HOM05D007336 ORTHO05D009339 2.3e-37 159.1 115 68.7
Cfa006663 Carpinus fangiana HOM05D007336 ORTHO05D009339 3.9e-37 158.3 115 65.2
Manes.01G127100 Manihot esculenta HOM05D007336 ORTHO05D009339 3.9e-37 158.3 115 64.3
Lalb_Chr16g0391581 Lupinus albus HOM05D007336 ORTHO05D009339 5.1e-37 157.9 115 64.3
Prupe.6G317700 Prunus persica HOM05D007336 ORTHO05D009339 1.1e-36 156.8 115 66.1
Thecc.05G317300 Theobroma cacao HOM05D007336 ORTHO05D009339 1.1e-36 156.8 115 67.0
MD04G1197300 Malus domestica HOM05D007336 ORTHO05D009339 1.9e-36 156.0 115 65.2
Atru.chr1.2192 Acer truncatum HOM05D007336 ORTHO05D009339 2.5e-36 155.6 115 65.2
Gorai.007G303000 Gossypium raimondii HOM05D007336 ORTHO05D009339 2.5e-36 155.6 115 67.0
GSVIVG01031156001 Vitis vinifera HOM05D007336 ORTHO05D009339 3.3e-36 155.2 115 63.5
Lj1g0024848 Lotus japonicus HOM05D007336 ORTHO05D009339 4.3e-36 154.8 115 59.1
FAN09G1805 Fragaria x ananassa HOM05D007336 ORTHO05D009339 7.4e-36 154.1 115 64.3
FAN14G5314 Fragaria x ananassa HOM05D007336 ORTHO05D009339 7.4e-36 154.1 115 64.3
Glyma.19G230700 Glycine max HOM05D007336 ORTHO05D009339 9.6e-36 153.7 115 62.6
arahy.Tifrunner.gnm1.ann1.N7WCQ3 Arachis hypogaea HOM05D000001 ORTHO05D010781 1.3e-35 153.3 116 66.4
Ciclev10002848m.g Citrus clementina HOM05D007336 ORTHO05D009339 1.3e-35 153.3 115 63.5
MD12G1210100 Malus domestica HOM05D007336 ORTHO05D009339 1.3e-35 153.3 115 62.6
arahy.Tifrunner.gnm1.ann1.63GRQU Arachis hypogaea HOM05D007336 ORTHO05D010781 1.6e-35 152.9 116 65.5
Gohir.D11G280800 Gossypium hirsutum HOM05D007336 ORTHO05D009339 2.1e-35 152.5 115 66.1
Atru.chr1.2191 Acer truncatum HOM05D007336 ORTHO05D009339 2.8e-35 152.1 115 64.3
RcHm_v2.0_Chr3g0456501 Rosa chinensis HOM05D007336 ORTHO05D009339 4.8e-35 151.4 115 63.5
MELO3C004210.2 Cucumis melo HOM05D007336 ORTHO05D009339 6.2e-35 151.0 116 63.8
Phvul.001G227200 Phaseolus vulgaris HOM05D007336 ORTHO05D009339 8.1e-35 150.6 116 62.9
FvH4_6g06960 Fragaria vesca HOM05D007336 ORTHO05D009339 1.1e-34 150.2 115 63.5
Eucgr.H03266 Eucalyptus grandis HOM05D007336 ORTHO05D009339 1.4e-34 149.8 110 62.7
Migut.G00122 Erythranthe guttata HOM05D007336 ORTHO05D009339 1.8e-34 149.4 115 63.5
PGR031G1948 Punica granatum HOM05D007336 ORTHO05D009339 1.8e-34 149.4 123 58.5
FAN05G1709 Fragaria x ananassa HOM05D007336 ORTHO05D009339 2.4e-34 149.1 115 62.6
FAN05G3591 Fragaria x ananassa HOM05D007336 ORTHO05D009339 2.4e-34 149.1 115 62.6
Psat0s3672g0040 Pisum sativum HOM05D007336 ORTHO05D009339 2.4e-34 149.1 115 59.1
ClCG02G015210 Citrullus lanatus HOM05D007336 ORTHO05D009339 3.1e-34 148.7 116 63.8
Potri.005G021800 Populus trichocarpa HOM05D007336 ORTHO05D009339 5.3e-34 147.9 110 62.7
CsaV3_2G006800 Cucumis sativus L. HOM05D007336 ORTHO05D009339 6.9e-34 147.5 116 62.1
Eucgr.H03264 Eucalyptus grandis HOM05D007336 ORTHO05D009339 1.2e-33 146.7 110 62.7
CANSAT54G2288 Cannabis sativa HOM05D007336 ORTHO05D009339 3.4e-33 145.2 115 60.9
FAN02G4454 Fragaria x ananassa HOM05D007336 ORTHO05D009339 2.2e-32 142.5 125 59.2
MSTRG.3884 Avicennia marina HOM05D007336 ORTHO05D009339 2.9e-32 142.1 122 56.6
Medtr7g112530 Medicago truncatula HOM05D007336 ORTHO05D009339 4.9e-32 141.4 115 55.7
SalBow2G0618 Salvia bowleyana HOM05D007336 ORTHO05D009339 4.9e-32 141.4 121 57.9
vmacro08103 Vaccinium macrocarpon HOM05D007336 ORTHO05D009339 4.9e-32 141.4 116 59.5
Actinidia40305 Actinidia chinensis HOM05D007336 ORTHO05D009339 8.4e-32 140.6 116 60.3
Nitab4.5_0000306g0320 Nicotiana tabacum HOM05D007336 ORTHO05D009339 8.4e-32 140.6 110 61.8
Dinv29713 Davidia involucrata HOM05D002548 ORTHO05D003031 1.1e-31 140.2 115 61.7
CSS0001044 Camellia sinensis var. sinensis HOM05D007336 ORTHO05D009339 1.9e-31 139.4 116 60.3
CDE02G0601 Ceratophyllum demersum HOM05D007336 ORTHO05D009339 1.9e-31 139.4 110 60.9
Rhsim04G0227800 Rhododendron simsii HOM05D007336 ORTHO05D009339 1.9e-31 139.4 116 60.3
Haze_04108 Corylus avellana HOM05D002548 ORTHO05D003031 4.2e-31 138.3 153 49.0
SGA_v2.0_scaffold104G30104 Striga asiatica HOM05D007336 ORTHO05D009339 5.5e-31 137.9 121 57.0
Lsat_1_v5_gn_6_76001 Lactuca sativa HOM05D007336 ORTHO05D009339 7.1e-31 137.5 115 59.1
HPP92_013733 Vanilla planifolia HOM05D007336 ORTHO05D009339 1.6e-30 136.3 115 56.5
Cc03_g01420 Coffea canephora HOM05D007336 ORTHO05D009339 2.7e-30 135.6 115 58.3
AUR62015269 Chenopodium quinoa HOM05D007336 ORTHO05D009339 3.5e-30 135.2 123 54.5
SEGI_32823 Sequoiadendron giganteum HOM05D007336 ORTHO05D009339 3.5e-30 135.2 115 55.7
Dinv44340 Davidia involucrata HOM05D007336 ORTHO05D009339 4.6e-30 134.8 115 60.0
Gohir.A11G270600 Gossypium hirsutum HOM05D007336 ORTHO05D009339 4.6e-30 134.8 99 68.7
Sc19g0005520 Simmondsia chinensis HOM05D007336 ORTHO05D009339 7.9e-30 134.0 116 57.8
AUR62018066 Chenopodium quinoa HOM05D007336 ORTHO05D009339 1.0e-29 133.7 115 55.7
EL10Ac3g06656 Beta vulgaris HOM05D007336 ORTHO05D009339 1.8e-29 132.9 115 56.5
Peaxi162Scf00065g01021 Petunia axillaris HOM05D007336 ORTHO05D009339 1.8e-29 132.9 110 60.0
TPR.G39916 Trifolium pratense HOM05D007336 ORTHO05D009339 1.8e-29 132.9 115 54.8
Hund20531 Selenicereus undatus HOM05D007336 ORTHO05D009339 2.3e-29 132.5 115 56.5
PGSC0003DMG400006241 Solanum tuberosum HOM05D007336 ORTHO05D009339 3.0e-29 132.1 110 58.2
Zm00001eb300400 Zea mays HOM05D007336 ORTHO05D009339 3.0e-29 132.1 114 53.5
DCAR_030493 Daucus carota HOM05D007336 ORTHO05D009339 5.1e-29 131.3 115 55.7
CAN.G14.12 Capsicum annuum HOM05D007336 ORTHO05D009339 1.1e-28 130.2 110 57.3
Nitab4.5_0002755g0010 Nicotiana tabacum HOM05D007336 ORTHO05D009339 1.5e-28 129.8 127 53.5
MBI18_g25083_MAGBIO Magnolia biondii HOM05D007336 ORTHO05D009339 9.6e-28 127.1 143 49.0
unitig_46.g18696 Utricularia gibba HOM05D007336 ORTHO05D009339 2.4e-26 122.5 111 55.0
Cpa.g.sc48.123 Carica papaya HOM05D007336 ORTHO05D009339 4.0e-26 121.7 197 39.1
Solyc01g065710.3 Solanum lycopersicum HOM05D007336 ORTHO05D009339 6.9e-26 120.9 110 52.7
Sopen01g027110 Solanum pennellii HOM05D007336 ORTHO05D009339 6.9e-26 120.9 110 52.7
Nn4g25729 Nelumbo nucifera HOM05D007336 ORTHO05D009339 2.0e-25 119.4 86 67.4
QL03p019121 Quercus lobata HOM05D007336 ORTHO05D009339 5.8e-25 117.9 86 65.1
PSO832G0037 Papaver somniferum HOM05D007336 ORTHO05D009339 2.9e-24 115.5 111 51.4
Prupe.2G221300 Prunus persica HOM05D007336 ORTHO05D009339 4.9e-24 114.8 84 65.5
Sed0016582 Sechium edule HOM05D007336 ORTHO05D009339 1.9e-23 112.8 81 65.4
ATR0693G059 Amborella trichopoda HOM05D007336 ORTHO05D009339 1.2e-22 110.2 82 61.0
AagrBONN_evm.TU.Sc2ySwM_344.3688 Anthoceros agrestis HOM05D007336 ORTHO05D009339 3.5e-22 108.6 112 47.3
HanXRQChr13g0413951 Helianthus annuus HOM05D007336 ORTHO05D009339 6.0e-22 107.8 87 59.8
VMungo1383G0834 Vigna mungo HOM05D007336 ORTHO05D009339 1.0e-21 107.1 81 61.7
Eucgr.H03263 Eucalyptus grandis HOM05D007336 ORTHO05D009339 1.3e-21 106.7 81 59.3
Ah.04g153680 Amaranthus hybridus HOM05D007336 ORTHO05D009339 3.0e-21 105.5 88 58.0
Eucgr.H03265 Eucalyptus grandis HOM05D007336 ORTHO05D009339 3.0e-21 105.5 81 59.3
Eucgr.L02901 Eucalyptus grandis HOM05D007336 ORTHO05D009339 3.0e-21 105.5 81 59.3
Pp3c22_13440 Physcomitrium patens HOM05D007336 ORTHO05D009339 1.5e-20 103.2 115 43.5
Glyma.03G233600 Glycine max HOM05D007336 ORTHO05D009339 5.7e-20 101.3 82 57.3
Prupe.3G209800 Prunus persica HOM05D007336 ORTHO05D009339 9.0e-18 94.0 97 55.7
Oeu031988.1 Olea europaea HOM05D007336 ORTHO05D009339 1.2e-17 93.6 86 53.5
SMO137G0008 Selaginella moellendorffii HOM05D007336 ORTHO05D009339 1.3e-16 90.1 110 45.5
Mapoly0064s0018 Marchantia polymorpha HOM05D007336 ORTHO05D009339 3.7e-11 72.0 74 48.6


User provided reference genes

Program Settings