Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aa31LG2G10610 Aethionema arabicum HOM05D005471 ORTHO05D006170 1.7e-221 772.3 381 100.0
Sp2g05030 Schrenkiella parvula HOM05D005471 ORTHO05D006170 5.0e-181 637.9 408 80.4
CARHR283850 Cardamine hirsuta HOM05D005471 ORTHO05D006170 2.5e-180 635.6 408 80.9
BcaC09g49476 Brassica carinata HOM05D005471 ORTHO05D006170 2.1e-179 632.5 408 79.9
AT1G59520 Arabidopsis thaliana HOM05D005471 ORTHO05D006170 2.2e-176 622.5 408 79.7
Carub.0002s0591 Capsella rubella HOM05D005471 ORTHO05D006170 1.1e-175 620.2 408 79.4
A01p28660 Brassica napus HOM05D005471 ORTHO05D006170 5.4e-175 617.8 403 78.9
C01p36310 Brassica napus HOM05D005471 ORTHO05D006170 1.2e-174 616.7 399 79.7
BolC1t03588H Brassica oleracea HOM05D005471 ORTHO05D006170 6.6e-173 610.9 410 77.6
BraA01t03038Z Brassica rapa HOM05D005471 ORTHO05D006170 6.6e-173 610.9 410 77.6
BcaC09g49477 Brassica carinata HOM05D005471 ORTHO05D006170 4.9e-160 568.2 399 75.4
Thhalv10023553m.g Eutrema salsugineum HOM05D005471 ORTHO05D006170 1.4e-159 566.6 408 72.3
THA.LOC104819922 Tarenaya hassleriana HOM05D005471 ORTHO05D006170 3.5e-158 562.0 409 71.9
BcaB04g20211 Brassica carinata HOM05D005471 ORTHO05D006170 1.4e-154 550.1 381 75.1
Manes.18G048900 Manihot esculenta HOM05D005471 ORTHO05D006170 2.0e-137 493.0 409 63.3
Gohir.D06G022300 Gossypium hirsutum HOM05D005471 ORTHO05D006170 3.8e-136 488.8 412 62.9
Gorai.010G026900 Gossypium raimondii HOM05D005471 ORTHO05D006170 3.8e-136 488.8 412 62.9
Gohir.A06G025200 Gossypium hirsutum HOM05D005471 ORTHO05D006170 5.5e-135 485.0 413 62.7
MELO3C010789.2 Cucumis melo HOM05D005471 ORTHO05D006170 3.5e-134 482.3 409 60.9
GSVIVG01009307001 Vitis vinifera HOM05D005471 ORTHO05D006170 4.6e-134 481.9 414 62.6
Thecc.08G085200 Theobroma cacao HOM05D005471 ORTHO05D006170 1.3e-133 480.3 410 61.5
Atru.chr13.864 Acer truncatum HOM05D005471 ORTHO05D006170 8.7e-133 477.6 409 63.1
Cfa013748 Carpinus fangiana HOM05D005471 ORTHO05D006170 2.5e-132 476.1 426 61.0
Ciclev10001411m.g Citrus clementina HOM05D005471 ORTHO05D006170 3.3e-132 475.7 410 62.2
MD08G1078900 Malus domestica HOM05D005471 ORTHO05D006170 4.3e-132 475.3 412 60.9
CiPaw.07G172600 Carya illinoinensis HOM05D005471 ORTHO05D006170 9.6e-132 474.2 428 61.0
Nn5g30656 Nelumbo nucifera HOM05D005471 ORTHO05D006170 1.3e-131 473.8 411 61.1
Manes.05G183100 Manihot esculenta HOM05D005471 ORTHO05D006170 2.8e-131 472.6 407 62.4
TPR.G30210 Trifolium pratense HOM05D005471 ORTHO05D006170 3.7e-131 472.2 411 62.0
Gorai.009G221700 Gossypium raimondii HOM05D005471 ORTHO05D006170 1.1e-130 470.7 410 61.5
Phvul.009G073700 Phaseolus vulgaris HOM05D005471 ORTHO05D006170 1.1e-130 470.7 412 60.7
Sc02g0008090 Simmondsia chinensis HOM05D005471 ORTHO05D006170 1.1e-130 470.7 409 59.9
Lalb_Chr08g0245201 Lupinus albus HOM05D005471 ORTHO05D006170 1.4e-130 470.3 410 60.7
CsaV3_2G025960 Cucumis sativus L. HOM05D005471 ORTHO05D006170 1.8e-130 469.9 409 59.7
Gohir.D05G215000 Gossypium hirsutum HOM05D005471 ORTHO05D006170 1.8e-130 469.9 410 61.2
MD15G1065900 Malus domestica HOM05D005471 ORTHO05D006170 3.1e-130 469.2 412 60.7
COL.COLO4_28470 Corchorus olitorius HOM05D005471 ORTHO05D006170 5.3e-130 468.4 405 61.5
Glyma.06G048400 Glycine max HOM05D005471 ORTHO05D006170 6.9e-130 468.0 410 61.2
Dinv44934 Davidia involucrata HOM05D005471 ORTHO05D006170 1.2e-129 467.2 410 60.7
FvH4_2g32730 Fragaria vesca HOM05D005471 ORTHO05D006170 7.6e-129 464.5 410 61.2
Lj1g0028245 Lotus japonicus HOM05D005471 ORTHO05D006170 7.6e-129 464.5 404 60.6
Prupe.1G419800 Prunus persica HOM05D005471 ORTHO05D006170 7.6e-129 464.5 403 61.3
Sed0019663 Sechium edule HOM05D005471 ORTHO05D006170 7.6e-129 464.5 405 60.0
Medtr3g103350 Medicago truncatula HOM05D005471 ORTHO05D006170 4.9e-128 461.8 410 59.3
FAN20G2694 Fragaria x ananassa HOM05D005471 ORTHO05D006170 6.5e-128 461.5 413 60.8
Lalb_Chr11g0063001 Lupinus albus HOM05D005471 ORTHO05D006170 6.5e-128 461.5 409 59.7
Eucgr.F02230 Eucalyptus grandis HOM05D005471 ORTHO05D006170 1.1e-127 460.7 411 59.6
Hma1.2p1_1170F.1_g263420 Hydrangea macrophylla HOM05D005471 ORTHO05D006170 1.1e-127 460.7 412 59.7
FAN15G0642 Fragaria x ananassa HOM05D005471 ORTHO05D006170 5.5e-127 458.4 413 60.0
arahy.Tifrunner.gnm1.ann1.F72CPE Arachis hypogaea HOM05D005471 ORTHO05D006170 9.3e-127 457.6 403 60.8
Cc10_g07570 Coffea canephora HOM05D005471 ORTHO05D006170 1.6e-126 456.8 404 60.4
SGA_v2.0_scaffold74G24542 Striga asiatica HOM05D005471 ORTHO05D006170 2.1e-126 456.4 416 58.4
CSS0040686 Camellia sinensis var. sinensis HOM05D005471 ORTHO05D006170 4.6e-126 455.3 411 59.1
TWI12G0997 Tripterygium wilfordii HOM05D005471 ORTHO05D006170 7.9e-126 454.5 412 60.0
FAN24G0217 Fragaria x ananassa HOM05D005471 ORTHO05D006170 2.3e-125 453.0 416 60.6
arahy.Tifrunner.gnm1.ann1.P8GEK4 Arachis hypogaea HOM05D005471 ORTHO05D006170 3.0e-125 452.6 437 56.3
FAN27G0342 Fragaria x ananassa HOM05D005471 ORTHO05D006170 5.1e-125 451.8 427 58.5
ClCG08G016670 Citrullus lanatus HOM05D005471 ORTHO05D006170 6.7e-125 451.4 406 58.9
Migut.C00408 Erythranthe guttata HOM05D005471 ORTHO05D006170 6.7e-125 451.4 413 57.1
Solyc04g077560.3 Solanum lycopersicum HOM05D005471 ORTHO05D006170 1.9e-124 449.9 408 59.8
Aqoxy6G02473 Aquilegia oxysepala HOM05D005471 ORTHO05D006170 2.5e-124 449.5 404 57.7
Psat5g045040 Pisum sativum HOM05D005471 ORTHO05D006170 2.5e-124 449.5 410 59.0
Sopen04g031200 Solanum pennellii HOM05D005471 ORTHO05D006170 4.3e-124 448.7 408 59.6
PGSC0003DMG400004915 Solanum tuberosum HOM05D005471 ORTHO05D006170 9.7e-124 447.6 408 59.8
Ca_15890_v3 Cicer arietinum L. HOM05D005471 ORTHO05D006170 6.3e-123 444.9 400 59.2
CiPaw.08G051800 Carya illinoinensis HOM05D005471 ORTHO05D006170 1.1e-122 444.1 424 58.3
PSO675G5405 Papaver somniferum HOM05D005471 ORTHO05D006170 2.4e-122 443.0 411 57.4
Sabra14G0008300 Salix brachista HOM05D005471 ORTHO05D006170 4.1e-122 442.2 437 56.3
MSTRG.25028 Avicennia marina HOM05D005471 ORTHO05D006170 5.3e-122 441.8 410 56.1
RcHm_v2.0_Chr6g0309951 Rosa chinensis HOM05D005471 ORTHO05D006170 9.0e-122 441.0 411 57.7
PSO541G0412 Papaver somniferum HOM05D005471 ORTHO05D006170 4.5e-121 438.7 409 58.2
EL10Ac1g02354 Beta vulgaris HOM05D005471 ORTHO05D006170 1.3e-120 437.2 400 57.8
Dinv39207 Davidia involucrata HOM05D005471 ORTHO05D006170 2.9e-120 436.0 395 58.7
Ah.05g166980 Amaranthus hybridus HOM05D005471 ORTHO05D006170 5.0e-120 435.3 408 58.6
MBI16_g27035_MAGBIO Magnolia biondii HOM05D005471 ORTHO05D006170 5.0e-120 435.3 455 54.3
Rhsim06G0064300 Rhododendron simsii HOM05D005471 ORTHO05D006170 1.1e-119 434.1 383 60.3
Duzib093G1789 Durio zibethinus HOM05D005471 ORTHO05D006170 1.4e-119 433.7 410 58.3
CSS0038926 Camellia sinensis var. sinensis HOM05D005471 ORTHO05D006170 4.2e-119 432.2 438 54.1
Gohir.D06G026900 Gossypium hirsutum HOM05D005471 ORTHO05D006170 9.4e-119 431.0 372 62.4
VMungo1309G2773 Vigna mungo HOM05D005471 ORTHO05D006170 2.1e-118 429.9 387 60.2
CDE02G4131 Ceratophyllum demersum HOM05D005471 ORTHO05D006170 2.7e-118 429.5 405 57.5
HanXRQChr15g0493081 Helianthus annuus HOM05D005471 ORTHO05D006170 6.1e-118 428.3 410 55.6
CSS0014765 Camellia sinensis var. sinensis HOM05D005471 ORTHO05D006170 1.4e-117 427.2 411 56.9
unitig_37.g13113 Utricularia gibba HOM05D005471 ORTHO05D006170 8.8e-117 424.5 412 55.1
HanXRQChr09g0254061 Helianthus annuus HOM05D005471 ORTHO05D006170 1.1e-116 424.1 409 55.7
ATR0739G016 Amborella trichopoda HOM05D005471 ORTHO05D006170 1.5e-116 423.7 400 56.5
ECA232G3342 Erigeron canadensis HOM05D005471 ORTHO05D006170 8.2e-115 417.9 409 56.2
PSO170G6612 Papaver somniferum HOM05D005471 ORTHO05D006170 1.4e-114 417.2 406 57.4
Gohir.A05G211700 Gossypium hirsutum HOM05D005471 ORTHO05D006170 1.2e-113 414.1 410 56.1
Glyma.04G047500 Glycine max HOM05D005471 ORTHO05D006170 1.7e-112 410.2 383 58.7
PSO017G6379 Papaver somniferum HOM05D005471 ORTHO05D006170 2.2e-112 409.8 406 56.7
Nitab4.5_0002796g0080 Nicotiana tabacum HOM05D005471 ORTHO05D006170 5.1e-109 398.7 412 54.1
HPP92_007709 Vanilla planifolia HOM05D005471 ORTHO05D006170 9.7e-108 394.4 402 54.2
TAR625G0189 Trochodendron aralioides HOM05D005471 ORTHO05D006170 1.2e-105 387.5 306 66.0
AUR62035006 Chenopodium quinoa HOM05D005471 ORTHO05D006170 3.8e-104 382.5 372 55.6
Nitab4.5_0001426g0050 Nicotiana tabacum HOM05D005471 ORTHO05D006170 5.5e-103 378.6 443 48.8
Os07g0248800 Oryza sativa ssp. japonica HOM05D005471 ORTHO05D006170 9.4e-103 377.9 403 51.4
Os10g0102900 Oryza sativa ssp. japonica HOM05D005471 ORTHO05D006170 9.4e-103 377.9 403 51.4
PGR031G3068 Punica granatum HOM05D005471 ORTHO05D006170 1.2e-102 377.5 384 53.4
Os04g0183100 Oryza sativa ssp. japonica HOM05D005471 ORTHO05D006170 3.6e-102 375.9 405 51.1
DCAR_019346 Daucus carota HOM05D005471 ORTHO05D006170 6.3e-99 365.2 408 50.0
Lj4A753G30 Lonicera japonica HOM05D005471 ORTHO05D006170 2.0e-97 360.1 364 55.5
Zm00001eb025640 Zea mays HOM05D005471 ORTHO05D006170 4.5e-97 359.0 405 49.1
Peaxi162Scf00340g00069 Petunia axillaris HOM05D005471 ORTHO05D006170 1.1e-95 354.4 452 47.8
Lsat_1_v5_gn_2_90520 Lactuca sativa HOM05D005471 ORTHO05D006170 1.2e-92 344.4 387 52.2
Lsat_1_v5_gn_1_56140 Lactuca sativa HOM05D001400 ORTHO05D001795 1.1e-90 337.8 397 49.1
Nitab4.5_0006888g0020 Nicotiana tabacum HOM05D005471 ORTHO05D006170 7.2e-87 325.1 411 48.4
Mapoly0067s0099 Marchantia polymorpha HOM05D005471 ORTHO05D006170 2.1e-86 323.6 411 46.5
Potri.014G013500 Populus trichocarpa HOM05D005471 ORTHO05D006170 8.8e-85 318.2 286 58.7
Cpa.g.sc142.57 Carica papaya HOM05D005471 ORTHO05D006170 1.0e-77 294.7 321 53.0
Pp3c17_20680 Physcomitrium patens HOM05D005471 ORTHO05D006170 1.5e-76 290.8 402 42.5
QL12p038448 Quercus lobata HOM05D005471 ORTHO05D006170 4.1e-74 282.7 312 51.6
AagrBONN_evm.TU.Sc2ySwM_368.1412 Anthoceros agrestis HOM05D005471 ORTHO05D006170 1.8e-69 267.3 408 40.9
SMO117G0302 Selaginella moellendorffii HOM05D005471 ORTHO05D006170 5.2e-69 265.8 389 42.4
CBR_g49495 Chara braunii HOM05D005471 ORTHO05D006170 3.7e-67 259.6 437 38.2
vmacro21421 Vaccinium macrocarpon HOM05D005471 ORTHO05D006170 2.1e-62 243.8 272 50.4
DCAR_020058 Daucus carota HOM05D005471 ORTHO05D006170 7.8e-57 225.3 232 50.4
AUR62037460 Chenopodium quinoa HOM05D005471 ORTHO05D006170 3.4e-52 209.9 242 47.5
Haze_22399 Corylus avellana HOM05D005471 ORTHO05D006170 1.6e-49 201.1 342 40.6
vmacro21420 Vaccinium macrocarpon HOM05D005471 ORTHO05D006170 6.0e-49 199.1 157 64.3
Haze_22407 Corylus avellana HOM05D005471 ORTHO05D006170 6.6e-48 195.7 356 38.5
Psat5g037200 Pisum sativum HOM05D005471 ORTHO05D006170 1.4e-37 161.4 174 50.0
Gohir.D04G027975 Gossypium hirsutum HOM05D005471 ORTHO05D006170 8.7e-32 142.1 112 67.0
Gorai.012G030800 Gossypium raimondii HOM05D005471 ORTHO05D006170 2.5e-31 140.6 112 66.1
Gohir.D12G192766 Gossypium hirsutum HOM05D005471 ORTHO05D006170 5.6e-31 139.4 112 66.1
Gohir.A12G016250 Gossypium hirsutum HOM05D005471 ORTHO05D006170 3.1e-29 133.7 112 64.3
QL12p038454 Quercus lobata HOM05D005471 ORTHO05D006170 4.5e-28 129.8 116 62.9
Cpa.g.sc142.58 Carica papaya HOM05D005471 ORTHO05D006170 9.3e-26 122.1 85 71.8
DCAR_020059 Daucus carota HOM05D005471 ORTHO05D006170 3.5e-25 120.2 96 69.8
Hund05280 Selenicereus undatus HOM05D005471 ORTHO05D006170 1.4e-21 108.2 115 47.8
SHI08425 Sapria himalayana HOM05D005471 ORTHO05D006170 6.9e-21 105.9 136 43.4
Peaxi162Scf00448g00027 Petunia axillaris HOM05D005471 ORTHO05D006170 6.5e-19 99.4 106 52.8
Phvul.009G072300 Phaseolus vulgaris HOM05D005471 ORTHO05D000997 6.0e-17 92.8 140 39.3
Gorai.001G227100 Gossypium raimondii HOM05D005471 ORTHO05D006170 5.1e-16 89.7 64 71.9
SEGI_08278 Sequoiadendron giganteum HOM05D005471 ORTHO05D006170 1.0e-11 75.5 115 37.4
Actinidia31832 Actinidia chinensis HOM05D006494 ORTHO05D007787 3.8e-11 73.6 60 60.0
SEGI_29276 Sequoiadendron giganteum HOM05D005471 ORTHO05D006170 1.1e-10 72.0 80 52.5
Cre07.g320250 Chlamydomonas reinhardtii HOM05D005471 ORTHO05D006170 3.0e-08 63.9 174 30.5
Gohir.D11G128350 Gossypium hirsutum HOM05D005471 ORTHO05D006170 1.1e-07 62.0 49 61.2
CAN.G213.23 Capsicum annuum HOM05D005471 ORTHO05D006170 2.2e-06 57.8 59 50.8


User provided reference genes

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