Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aa31LG2G10230 Aethionema arabicum HOM05D006250 ORTHO05D007107 1.4e-225 786.6 600 100.0
CARHR010650 Cardamine hirsuta HOM05D006250 ORTHO05D007107 1.8e-100 370.9 609 68.1
Carub.0001s0994 Capsella rubella HOM05D006250 ORTHO05D007107 4.3e-94 349.7 614 66.6
Sp1g09140 Schrenkiella parvula HOM05D006250 ORTHO05D007107 8.1e-93 345.5 613 66.6
Thhalv10007114m.g Eutrema salsugineum HOM05D006250 ORTHO05D007107 1.1e-92 345.1 617 66.8
BolC8t49010H Brassica oleracea HOM05D006250 ORTHO05D007107 1.4e-92 344.7 614 66.8
THA.LOC104816735 Tarenaya hassleriana HOM05D006250 ORTHO05D007107 6.9e-92 342.4 608 66.1
BraA08t35306Z Brassica rapa HOM05D006250 ORTHO05D007107 5.8e-91 339.3 611 66.4
AL1G21310 Arabidopsis lyrata HOM05D006250 ORTHO05D007107 8.4e-90 335.5 606 66.7
AT1G10510 Arabidopsis thaliana HOM05D006250 ORTHO05D007107 2.5e-89 334.0 606 66.5
BcaC07g38569 Brassica carinata HOM05D006250 ORTHO05D007107 1.0e-87 328.6 613 65.7
A06p07280 Brassica napus HOM05D006250 ORTHO05D007107 2.6e-83 313.9 612 65.2
BraA06t23934Z Brassica rapa HOM05D006250 ORTHO05D007107 2.6e-83 313.9 612 65.2
BcaC05g24872 Brassica carinata HOM05D006250 ORTHO05D007107 4.5e-83 313.2 607 64.9
BolC5t29626H Brassica oleracea HOM05D006250 ORTHO05D007107 1.0e-82 312.0 622 64.0
COL.COLO4_19523 Corchorus olitorius HOM05D006250 ORTHO05D007107 2.2e-82 310.8 561 64.5
C05p08800 Brassica napus HOM05D006250 ORTHO05D007107 6.5e-82 309.3 607 64.9
Thecc.02G242000 Theobroma cacao HOM05D006250 ORTHO05D007107 3.0e-79 300.4 564 64.9
C08p13750 Brassica napus HOM05D006250 ORTHO05D007107 6.7e-79 299.3 591 65.3
A08p33910 Brassica napus HOM05D006250 ORTHO05D007107 1.1e-78 298.5 612 63.6
BcaC07g38607 Brassica carinata HOM05D006250 ORTHO05D007107 5.7e-78 296.2 622 64.6
BcaC05g24932 Brassica carinata HOM05D006250 ORTHO05D007107 3.1e-76 290.4 603 64.8
Haze_12133 Corylus avellana HOM05D006250 ORTHO05D007107 2.0e-75 287.7 627 58.9
Ciclev10031015m.g Citrus clementina HOM05D006250 ORTHO05D007107 5.9e-75 286.2 610 59.7
TWI18G0037 Tripterygium wilfordii HOM05D006250 ORTHO05D007107 1.2e-72 278.5 611 59.9
Gorai.009G344900 Gossypium raimondii HOM05D006250 ORTHO05D007107 1.6e-72 278.1 579 62.0
Gohir.D05G321400 Gossypium hirsutum HOM05D006250 ORTHO05D007107 3.6e-72 276.9 579 62.0
Potri.008G193700 Populus trichocarpa HOM05D006250 ORTHO05D007107 3.0e-71 273.9 564 63.5
Duzib251G0023 Durio zibethinus HOM05D006250 ORTHO05D007107 3.9e-71 273.5 564 62.4
QL03p066863 Quercus lobata HOM05D006250 ORTHO05D007107 3.9e-71 273.5 624 59.9
Gohir.A05G319200 Gossypium hirsutum HOM05D006250 ORTHO05D007107 1.1e-70 271.9 579 62.0
Sabra08G0147200 Salix brachista HOM05D006250 ORTHO05D007107 2.0e-70 271.2 622 54.7
GSVIVG01020179001 Vitis vinifera HOM05D006250 ORTHO05D007107 3.3e-70 270.4 628 57.0
arahy.Tifrunner.gnm1.ann1.ST0DQ2 Arachis hypogaea HOM05D006250 ORTHO05D007107 8.2e-69 265.8 617 55.8
Hma1.2p1_1049F.1_g251780 Hydrangea macrophylla HOM05D006250 ORTHO05D007107 1.4e-68 265.0 614 59.0
Hma1.2p1_2649F.1_g326135 Hydrangea macrophylla HOM05D006250 ORTHO05D007107 1.4e-68 265.0 614 59.0
arahy.Tifrunner.gnm1.ann1.11GRU6 Arachis hypogaea HOM05D006250 ORTHO05D007107 2.4e-68 264.2 617 55.8
Dinv31115 Davidia involucrata HOM05D006250 ORTHO05D007107 3.1e-68 263.8 626 57.8
Lalb_Chr09g0326521 Lupinus albus HOM05D006250 ORTHO05D007107 6.9e-68 262.7 547 61.1
CiPaw.05G146100 Carya illinoinensis HOM05D006250 ORTHO05D007107 9.1e-68 262.3 626 59.1
Migut.L01451 Erythranthe guttata HOM05D006250 ORTHO05D007107 1.2e-67 261.9 615 58.0
Eucgr.B03367 Eucalyptus grandis HOM05D006250 ORTHO05D007107 2.0e-67 261.2 620 57.7
Manes.05G091350 Manihot esculenta HOM05D006250 ORTHO05D007107 2.6e-67 260.8 610 58.5
TPR.G13515 Trifolium pratense HOM05D006250 ORTHO05D007107 1.0e-66 258.8 564 60.3
Cc11_g14200 Coffea canephora HOM05D006250 ORTHO05D007107 3.8e-66 256.9 556 61.0
Glyma.02G029800 Glycine max HOM05D006250 ORTHO05D007107 3.8e-66 256.9 613 57.6
FAN22G2376 Fragaria x ananassa HOM05D006250 ORTHO05D007107 1.1e-65 255.4 611 56.8
Glyma.01G036200 Glycine max HOM05D006250 ORTHO05D007107 9.4e-65 252.3 613 55.5
FAN17G0914 Fragaria x ananassa HOM05D006250 ORTHO05D007107 3.0e-63 247.3 622 55.8
Nn3g16985 Nelumbo nucifera HOM05D006250 ORTHO05D007107 2.0e-62 244.6 601 53.7
CAN.G1160.10 Capsicum annuum HOM05D006250 ORTHO05D007107 2.6e-62 244.2 612 56.7
Solyc05g006170.4 Solanum lycopersicum HOM05D006250 ORTHO05D007107 6.3e-61 239.6 620 56.6
MSTRG.625 Avicennia marina HOM05D006250 ORTHO05D007107 1.1e-60 238.8 628 55.3
Sopen05g002190 Solanum pennellii HOM05D000912 ORTHO05D001232 1.1e-60 238.8 620 56.6
PGSC0003DMG400015603 Solanum tuberosum HOM05D006250 ORTHO05D007107 1.1e-60 238.8 620 56.6
MD13G1086400 Malus domestica HOM05D006250 ORTHO05D007107 4.1e-60 236.9 612 56.9
unitig_749.g13267 Utricularia gibba HOM05D006250 ORTHO05D007107 5.3e-60 236.5 559 54.6
VMungo0720G1586 Vigna mungo HOM05D006250 ORTHO05D007107 7.0e-60 236.1 614 57.3
TAR371G0500 Trochodendron aralioides HOM05D006250 ORTHO05D007107 9.1e-60 235.7 616 53.6
Atru.chr11.1955 Acer truncatum HOM05D006250 ORTHO05D007107 1.2e-59 235.3 600 45.8
Aqoxy3G03090 Aquilegia oxysepala HOM05D006250 ORTHO05D007107 2.0e-59 234.6 626 56.5
MD16G1085800 Malus domestica HOM05D006250 ORTHO05D007107 5.9e-59 233.0 609 56.2
RcHm_v2.0_Chr4g0444691 Rosa chinensis HOM05D006250 ORTHO05D007107 7.7e-59 232.6 610 56.2
Lsat_1_v5_gn_3_49600 Lactuca sativa HOM05D006250 ORTHO05D007107 2.9e-58 230.7 566 60.8
CDE04G2141 Ceratophyllum demersum HOM05D006250 ORTHO05D007107 6.5e-58 229.6 577 57.5
FvH4_4g35070 Fragaria vesca HOM05D006250 ORTHO05D007107 1.5e-57 228.4 611 55.8
Prupe.1G260300 Prunus persica HOM05D006250 ORTHO05D007107 5.5e-57 226.5 239 54.0
Lj2g0015976 Lotus japonicus HOM05D006250 ORTHO05D007107 1.6e-56 224.9 613 56.3
FAN12G0989 Fragaria x ananassa HOM05D006250 ORTHO05D007107 2.1e-56 224.6 613 50.7
MBI18_g16987_MAGBIO Magnolia biondii HOM05D006250 ORTHO05D007107 4.7e-56 223.4 550 60.2
CANSAT01G1928 Cannabis sativa HOM05D006250 ORTHO05D007107 8.0e-56 222.6 573 58.1
SalBow2G3220 Salvia bowleyana HOM05D006250 ORTHO05D007107 1.4e-55 221.9 543 59.7
TAR629G0559 Trochodendron aralioides HOM05D006250 ORTHO05D007107 2.3e-55 221.1 241 52.3
VMungo1215G1343 Vigna mungo HOM05D006250 ORTHO05D007107 3.9e-55 220.3 581 57.8
Phvul.002G075400 Phaseolus vulgaris HOM05D006250 ORTHO05D007107 1.1e-54 218.8 645 51.2
AUR62039411 Chenopodium quinoa HOM05D006250 ORTHO05D007107 2.6e-54 217.6 607 55.4
AUR62026573 Chenopodium quinoa HOM05D006250 ORTHO05D007107 1.3e-53 215.3 607 55.0
Ah.03g132320 Amaranthus hybridus HOM05D006250 ORTHO05D007107 2.2e-53 214.5 642 44.7
EL10Ac6g13760 Beta vulgaris HOM05D006250 ORTHO05D007107 6.3e-53 213.0 612 54.9
Psat4g140960 Pisum sativum HOM05D006250 ORTHO05D007107 1.1e-52 212.2 234 51.7
Ca_18091_v3 Cicer arietinum L. HOM05D006250 ORTHO05D007107 1.4e-52 211.8 621 55.4
HanXRQChr10g0288221 Helianthus annuus HOM05D006250 ORTHO05D007107 2.4e-52 211.1 169 65.7
PSO832G4030 Papaver somniferum HOM05D006250 ORTHO05D007107 3.1e-52 210.7 628 53.7
PSO063G2741 Papaver somniferum HOM05D006250 ORTHO05D007107 4.1e-52 210.3 628 53.5
Lj6A800T42 Lonicera japonica HOM05D006250 ORTHO05D007107 7.0e-52 209.5 586 56.0
Actinidia15003 Actinidia chinensis HOM05D006250 ORTHO05D007107 9.1e-52 209.1 559 57.6
Medtr5g035590 Medicago truncatula HOM05D006250 ORTHO05D007107 9.1e-52 209.1 173 63.0
CSS0049978 Camellia sinensis var. sinensis HOM05D006250 ORTHO05D007107 6.5e-50 203.0 624 54.0
ClCG09G022110 Citrullus lanatus HOM05D006250 ORTHO05D007107 6.5e-50 203.0 264 49.6
ECA246G3811 Erigeron canadensis HOM05D006250 ORTHO05D007107 6.5e-50 203.0 176 60.8
FAN07G1033 Fragaria x ananassa HOM05D006250 ORTHO05D007107 5.5e-49 199.9 251 50.2
Sed0020226 Sechium edule HOM05D006250 ORTHO05D007107 2.7e-48 197.6 422 57.1
DCAR_026556 Daucus carota HOM05D006250 ORTHO05D007107 4.0e-47 193.7 164 62.2
CsaV3_5G025030 Cucumis sativus L. HOM05D006250 ORTHO05D007107 6.3e-45 186.4 219 54.3
Nitab4.5_0005722g0060 Nicotiana tabacum HOM05D006250 ORTHO05D007107 1.8e-44 184.9 154 65.6
MELO3C002989.2 Cucumis melo HOM05D006250 ORTHO05D007107 1.6e-43 181.8 219 53.4
SGA_v2.0_scaffold8G04258 Striga asiatica HOM05D006250 ORTHO05D007107 1.6e-43 181.8 678 50.3
Hund05952 Selenicereus undatus HOM05D006250 ORTHO05D007107 3.5e-43 180.6 220 49.1
PGR102G1255 Punica granatum HOM05D006250 ORTHO05D007107 4.2e-41 173.7 496 59.7
Dinv24907 Davidia involucrata HOM05D006250 ORTHO05D007107 5.5e-41 173.3 479 62.6
ATR0829G105 Amborella trichopoda HOM05D006250 ORTHO05D007107 3.6e-40 170.6 509 58.0
Os06g0237502 Oryza sativa ssp. japonica HOM05D006250 ORTHO05D007107 3.0e-39 167.5 550 51.6
Lsat_1_v5_gn_4_95161 Lactuca sativa HOM05D006250 ORTHO05D007107 2.8e-37 161.0 124 66.1
Sc11g0001380 Simmondsia chinensis HOM05D006250 ORTHO05D007107 4.1e-36 157.1 163 56.4
Rhsim12G0124700 Rhododendron simsii HOM05D006250 ORTHO05D007107 5.9e-35 153.3 198 49.0
vmacro16283 Vaccinium macrocarpon HOM05D006250 ORTHO05D007107 8.6e-34 149.4 121 62.8
Peaxi162Scf00421g00828 Petunia axillaris HOM05D006250 ORTHO05D007107 1.1e-33 149.1 549 53.6
Zm00001eb371900 Zea mays HOM05D006250 ORTHO05D007107 1.1e-33 149.1 565 48.8
Hma1.2p1_1049F.1_g251790 Hydrangea macrophylla HOM05D006250 ORTHO05D007107 5.5e-33 146.7 179 49.2
Hma1.2p1_2649F.1_g326133 Hydrangea macrophylla HOM05D006250 ORTHO05D007107 5.5e-33 146.7 179 49.2
HPP92_017346 Vanilla planifolia HOM05D006250 ORTHO05D007107 1.3e-29 135.6 572 50.9
Hma1.2p1_2649F.1_g326137 Hydrangea macrophylla HOM05D006250 ORTHO05D007107 1.4e-23 115.5 239 62.8
Nitab4.5_0000257g0160 Nicotiana tabacum HOM05D006250 ORTHO05D007107 2.6e-22 111.3 155 45.8
TAR629G0016 Trochodendron aralioides HOM05D006250 ORTHO05D007107 1.4e-20 105.5 406 49.8
DCAR_026558 Daucus carota HOM05D006250 ORTHO05D007107 7.8e-19 99.8 154 43.5
SEGI_23986 Sequoiadendron giganteum HOM05D006250 ORTHO05D007107 7.8e-19 99.8 576 47.9
vmacro16284 Vaccinium macrocarpon HOM05D006250 ORTHO05D007107 1.9e-17 95.1 191 39.3
Lsat_1_v5_gn_4_84060 Lactuca sativa HOM05D006250 ORTHO05D007107 6.2e-16 90.1 64 67.2
AagrBONN_evm.TU.Sc2ySwM_344.3920 Anthoceros agrestis HOM05D006250 ORTHO05D007107 5.2e-15 87.0 69 60.9
AL1G24250 Arabidopsis lyrata HOM05D014944 ORTHO05D007107 4.9e-13 80.5 142 39.4
SEGI_34898 Sequoiadendron giganteum HOM05D006250 ORTHO05D007107 3.2e-12 77.8 225 56.0
Pp3c14_24560 Physcomitrium patens HOM05D006250 ORTHO05D007107 2.3e-10 71.6 241 55.2
Pp3c14_24566 Physcomitrium patens HOM05D006250 ORTHO05D007107 2.3e-10 71.6 241 55.2
Mapoly0090s0039 Marchantia polymorpha HOM05D006250 ORTHO05D007107 1.5e-09 68.9 131 38.2
SMO116G0024 Selaginella moellendorffii HOM05D006250 ORTHO05D007107 1.9e-09 68.6 62 51.6
CBR_g61650 Chara braunii HOM05D006250 ORTHO05D007107 2.8e-08 64.7 241 52.7


User provided reference genes

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