Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aa31LG1G9290 Aethionema arabicum HOM05D007231 ORTHO05D009024 2.1e-143 512.3 250 100.0
Sp1g02240 Schrenkiella parvula HOM05D007231 ORTHO05D009024 1.6e-122 443.0 250 85.2
CARHR002550 Cardamine hirsuta HOM05D007231 ORTHO05D009024 4.5e-122 441.4 250 84.8
BcaC05g24637 Brassica carinata HOM05D007231 ORTHO05D009024 1.7e-121 439.5 251 86.1
A10p01800 Brassica napus HOM05D007231 ORTHO05D009024 5.6e-120 434.5 251 85.3
BraA10t42455Z Brassica rapa HOM05D007231 ORTHO05D009024 5.6e-120 434.5 251 84.9
BcaC05g24551 Brassica carinata HOM05D007231 ORTHO05D009024 1.2e-119 433.3 251 84.1
C05p01780 Brassica napus HOM05D007231 ORTHO05D009024 1.4e-118 429.9 262 82.1
BolC5t28956H Brassica oleracea HOM05D007231 ORTHO05D009024 2.3e-118 429.1 258 82.9
Thhalv10008549m.g Eutrema salsugineum HOM05D007231 ORTHO05D009024 5.2e-118 427.9 255 82.7
AL1G12740 Arabidopsis lyrata HOM05D007231 ORTHO05D009024 2.6e-117 425.6 250 83.6
AT1G03250 Arabidopsis thaliana HOM05D007231 ORTHO05D009024 6.4e-116 421.0 250 82.0
Carub.0001s0236 Capsella rubella HOM05D007231 ORTHO05D009024 2.0e-114 416.0 250 80.8
THA.LOC104801225 Tarenaya hassleriana HOM05D007231 ORTHO05D009024 2.1e-111 406.0 251 79.3
Atru.chr5.1389 Acer truncatum HOM05D007231 ORTHO05D009024 6.0e-98 361.3 251 70.1
Thecc.01G282400 Theobroma cacao HOM05D007231 ORTHO05D009024 2.1e-95 352.8 251 68.5
COL.COLO4_09128 Corchorus olitorius HOM05D007231 ORTHO05D009024 6.2e-95 351.3 251 69.7
Gohir.D08G077400 Gossypium hirsutum HOM05D007231 ORTHO05D009024 1.8e-94 349.7 251 68.1
Gohir.A08G069100 Gossypium hirsutum HOM05D007231 ORTHO05D009024 3.1e-94 349.0 251 68.1
Duzib211G0396 Durio zibethinus HOM05D007231 ORTHO05D009024 6.8e-94 347.8 251 66.9
Gorai.004G082300 Gossypium raimondii HOM05D007231 ORTHO05D009024 1.2e-93 347.1 251 67.7
Manes.05G074400 Manihot esculenta HOM05D007231 ORTHO05D009024 1.2e-93 347.1 251 68.5
CiPaw.08G104200 Carya illinoinensis HOM05D007231 ORTHO05D009024 2.4e-91 339.3 251 66.5
Actinidia00741 Actinidia chinensis HOM05D007231 ORTHO05D009024 1.2e-90 337.0 251 65.3
Dinv32951 Davidia involucrata HOM05D007231 ORTHO05D009024 1.6e-90 336.7 253 65.2
Ciclev10021857m.g Citrus clementina HOM05D007231 ORTHO05D009024 2.7e-90 335.9 252 66.3
Cfa006118 Carpinus fangiana HOM05D007231 ORTHO05D009024 7.8e-90 334.3 256 65.6
QL12p022281 Quercus lobata HOM05D007231 ORTHO05D009024 7.8e-90 334.3 250 66.4
GSVIVG01011110001 Vitis vinifera HOM05D007231 ORTHO05D009024 7.8e-90 334.3 249 65.1
Eucgr.K03384 Eucalyptus grandis HOM05D007231 ORTHO05D009024 1.7e-89 333.2 243 67.1
CANSAT25G1925 Cannabis sativa HOM05D007231 ORTHO05D009024 3.0e-89 332.4 252 65.9
TAR636G3122 Trochodendron aralioides HOM05D007231 ORTHO05D009024 5.1e-89 331.6 251 64.1
Cpa.g.sc64.168 Carica papaya HOM05D007231 ORTHO05D009024 8.6e-89 330.9 250 66.0
TAR365G1202 Trochodendron aralioides HOM05D007231 ORTHO05D009024 8.6e-89 330.9 251 64.1
Cc01_g19680 Coffea canephora HOM05D007231 ORTHO05D009024 1.1e-88 330.5 251 63.7
Rhsim13G0023500 Rhododendron simsii HOM05D007231 ORTHO05D009024 1.1e-88 330.5 252 64.7
Lj5g0005680 Lotus japonicus HOM05D007231 ORTHO05D009024 1.9e-88 329.7 231 67.1
CAN.G609.11 Capsicum annuum HOM05D007231 ORTHO05D009024 3.3e-88 328.9 251 65.3
Glyma.10G025400 Glycine max HOM05D007231 ORTHO05D009024 4.3e-88 328.6 237 67.5
Dinv11248 Davidia involucrata HOM05D007231 ORTHO05D009024 5.6e-88 328.2 253 66.4
Potri.019G046400 Populus trichocarpa HOM05D007231 ORTHO05D009024 9.6e-88 327.4 250 65.6
CsaV3_7G028660 Cucumis sativus L. HOM05D007231 ORTHO05D009024 2.1e-87 326.2 251 65.3
MELO3C015851.2 Cucumis melo HOM05D007231 ORTHO05D009024 2.8e-87 325.9 251 64.5
Actinidia09146 Actinidia chinensis HOM05D007231 ORTHO05D009024 4.7e-87 325.1 251 64.9
arahy.Tifrunner.gnm1.ann1.9UA39Y Arachis hypogaea HOM05D007231 ORTHO05D009024 6.2e-87 324.7 252 63.9
arahy.Tifrunner.gnm1.ann1.LJDI86 Arachis hypogaea HOM05D007231 ORTHO05D009024 6.2e-87 324.7 252 63.9
Nitab4.5_0001028g0140 Nicotiana tabacum HOM05D007231 ORTHO05D009024 6.2e-87 324.7 251 63.7
Sabra19G0055900 Salix brachista HOM05D007231 ORTHO05D009024 1.1e-86 323.9 250 64.8
Phvul.007G170300 Phaseolus vulgaris HOM05D007231 ORTHO05D009024 3.1e-86 322.4 234 66.2
Prupe.8G243400 Prunus persica HOM05D007231 ORTHO05D009024 5.2e-86 321.6 251 64.9
Lalb_Chr06g0163091 Lupinus albus HOM05D007231 ORTHO05D009024 3.4e-85 318.9 245 62.0
Peaxi162Scf00570g00058 Petunia axillaris HOM05D007231 ORTHO05D009024 9.9e-85 317.4 251 61.4
Lalb_Chr02g0142831 Lupinus albus HOM05D007231 ORTHO05D009024 1.3e-84 317.0 245 62.0
Nn1g02166 Nelumbo nucifera HOM05D007231 ORTHO05D009024 1.3e-84 317.0 250 64.8
VMungo0720G1677 Vigna mungo HOM05D002055 ORTHO05D002120 1.7e-84 316.6 223 68.6
Sopen09g026640 Solanum pennellii HOM05D007231 ORTHO05D009024 3.8e-84 315.5 251 62.2
Ca_09766_v3 Cicer arietinum L. HOM05D002055 ORTHO05D002120 4.9e-84 315.1 243 63.4
MD11G1288600 Malus domestica HOM05D007231 ORTHO05D009024 6.4e-84 314.7 253 62.1
Solyc09g064930.3 Solanum lycopersicum HOM05D007231 ORTHO05D009024 6.4e-84 314.7 251 61.8
vmacro02556 Vaccinium macrocarpon HOM05D007231 ORTHO05D009024 6.4e-84 314.7 251 62.5
FvH4_2g23810 Fragaria vesca HOM05D007231 ORTHO05D009024 8.4e-84 314.3 254 64.6
Nitab4.5_0002386g0100 Nicotiana tabacum HOM05D002055 ORTHO05D009024 1.4e-83 313.5 248 62.5
PSO210G0158 Papaver somniferum HOM05D007231 ORTHO05D009024 1.4e-83 313.5 249 64.7
Psat6g125920 Pisum sativum HOM05D007231 ORTHO05D009024 3.2e-83 312.4 247 63.6
RcHm_v2.0_Chr6g0291381 Rosa chinensis HOM05D007231 ORTHO05D009024 9.3e-83 310.8 253 62.5
SalBow4G2275 Salvia bowleyana HOM05D007231 ORTHO05D009024 2.1e-82 309.7 252 61.5
Medtr1g072510 Medicago truncatula HOM05D007231 ORTHO05D009024 3.5e-82 308.9 227 64.8
FAN27G1680 Fragaria x ananassa HOM05D007231 ORTHO05D009024 1.3e-81 307.0 261 62.8
HanXRQChr01g0002311 Helianthus annuus HOM05D007231 ORTHO05D009024 3.0e-81 305.8 232 63.4
MSTRG.18222 Avicennia marina HOM05D007231 ORTHO05D009024 1.1e-80 303.9 251 60.6
Lj2C1175G18 Lonicera japonica HOM05D007231 ORTHO05D009024 1.9e-80 303.1 315 52.7
Aqoxy2G03271 Aquilegia oxysepala HOM05D007231 ORTHO05D009024 9.6e-80 300.8 232 63.8
Sed0024964 Sechium edule HOM05D002055 ORTHO05D002120 9.6e-80 300.8 225 64.9
Oeu015959.1 Olea europaea HOM05D007231 ORTHO05D009024 1.6e-79 300.1 227 64.8
HanXRQChr11g0327631 Helianthus annuus HOM05D007231 ORTHO05D009024 4.8e-79 298.5 250 60.4
SGA_v2.0_scaffold11G05804 Striga asiatica HOM05D002055 ORTHO05D002120 1.8e-78 296.6 259 58.3
Oeu022878.1 Olea europaea HOM05D007231 ORTHO05D009024 2.4e-78 296.2 217 65.9
Hund05352 Selenicereus undatus HOM05D007231 ORTHO05D009024 2.4e-78 296.2 250 60.4
MBI19_g24716_MAGBIO Magnolia biondii HOM05D007231 ORTHO05D009024 3.1e-78 295.8 246 58.9
Migut.D00275 Erythranthe guttata HOM05D007231 ORTHO05D009024 6.9e-78 294.7 251 57.4
ECA248G0248 Erigeron canadensis HOM05D002055 ORTHO05D002120 1.5e-77 293.5 230 63.5
Lsat_1_v5_gn_5_190100 Lactuca sativa HOM05D007231 ORTHO05D009024 4.5e-77 292.0 249 60.2
Duzib138G1636 Durio zibethinus HOM05D007231 ORTHO05D009024 9.9e-77 290.8 251 61.0
SGA_v2.0_scaffold1G00456 Striga asiatica HOM05D007231 ORTHO05D009024 1.3e-76 290.4 204 67.6
TWI14G0923 Tripterygium wilfordii HOM05D002055 ORTHO05D002120 4.9e-76 288.5 200 71.0
EL10Ac7g17220 Beta vulgaris HOM05D007231 ORTHO05D009024 8.4e-76 287.7 302 51.7
ClCG09G006940 Citrullus lanatus HOM05D002055 ORTHO05D002120 8.4e-76 287.7 199 69.8
AUR62036799 Chenopodium quinoa HOM05D007231 ORTHO05D009024 1.4e-75 287.0 278 53.2
FAN20G2044 Fragaria x ananassa HOM05D007231 ORTHO05D009024 6.0e-74 281.6 303 54.1
unitig_0.g109 Utricularia gibba HOM05D007231 ORTHO05D009024 1.6e-71 273.5 213 59.6
PGR044G2216 Punica granatum HOM05D007231 ORTHO05D009024 3.1e-70 269.2 188 69.1
Ciclev10022442m.g Citrus clementina HOM05D007231 ORTHO05D009024 5.3e-70 268.5 188 68.6
Os12g0144000 Oryza sativa ssp. japonica HOM05D007231 ORTHO05D009024 2.0e-69 266.5 243 54.7
CDE04G0796 Ceratophyllum demersum HOM05D007231 ORTHO05D009024 3.4e-69 265.8 233 57.9
CSS0040014 Camellia sinensis var. sinensis HOM05D007231 ORTHO05D009024 5.8e-69 265.0 190 66.8
Os11g0147100 Oryza sativa ssp. japonica HOM05D007231 ORTHO05D009024 6.4e-68 261.5 246 52.8
Zm00001eb342980 Zea mays HOM05D007231 ORTHO05D009024 1.9e-64 250.0 245 51.0
Zm00001eb196600 Zea mays HOM05D007231 ORTHO05D009024 4.8e-63 245.4 249 50.2
ATR0626G005 Amborella trichopoda HOM05D007231 ORTHO05D009024 8.1e-63 244.6 195 56.4
AUR62039907 Chenopodium quinoa HOM05D007231 ORTHO05D009024 1.1e-56 224.2 152 68.4
HPP92_016066 Vanilla planifolia HOM05D006695 ORTHO05D008239 2.5e-56 223.0 208 54.8
Sc05g0004910 Simmondsia chinensis HOM05D007231 ORTHO05D009024 4.2e-51 205.7 159 64.2
SEGI_15193 Sequoiadendron giganteum HOM05D007231 ORTHO05D009024 4.5e-37 159.1 221 40.3
TPR.G19967 Trifolium pratense HOM05D007231 ORTHO05D009024 8.5e-36 154.8 122 60.7
BcaC05g24635 Brassica carinata HOM05D007231 ORTHO05D009024 2.4e-30 136.7 79 78.5
Mapoly0057s0044 Marchantia polymorpha HOM05D007231 ORTHO05D009024 4.5e-29 132.5 185 40.5
SMO137G0298 Selaginella moellendorffii HOM05D007231 ORTHO05D009024 1.0e-25 121.3 221 34.8
SMO170G0043 Selaginella moellendorffii HOM05D007231 ORTHO05D009024 2.3e-25 120.2 221 34.4
AagrBONN_evm.TU.Sc2ySwM_117.667 Anthoceros agrestis HOM05D007231 ORTHO05D009024 6.7e-25 118.6 222 30.6
MCO13G326 Micromonas commoda HOM05D007231 ORTHO05D009024 8.8e-25 118.2 226 33.6
Pp3c4_28170 Physcomitrium patens HOM05D007231 ORTHO05D009024 1.2e-21 107.8 217 33.6
Cre01.g040100 Chlamydomonas reinhardtii HOM05D007231 ORTHO05D009024 4.7e-18 95.9 163 32.5
Cc01_g19320 Coffea canephora HOM05D007231 ORTHO05D009024 4.0e-17 92.8 136 41.2
TPR.G24733 Trifolium pratense HOM05D007231 ORTHO05D009024 1.0e-12 78.2 53 69.8
CDE02G1070 Ceratophyllum demersum HOM05D007231 ORTHO05D009024 4.2e-11 72.8 123 39.8
TPR.G17639 Trifolium pratense HOM05D007231 ORTHO05D009024 3.0e-09 66.6 44 63.6
TPR.G23952 Trifolium pratense HOM05D007231 ORTHO05D009024 3.0e-09 66.6 44 63.6
CDE02G2493 Ceratophyllum demersum HOM05D007231 ORTHO05D009024 1.2e-08 64.7 67 50.7


User provided reference genes

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