Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aa31LG1G7510 Aethionema arabicum HOM05D007438 ORTHO05D009395 2.0e-161 572.4 294 100.0
Sp1g05220 Schrenkiella parvula HOM05D007438 ORTHO05D009395 2.6e-84 316.2 310 59.4
BolC5t29243H Brassica oleracea HOM05D007438 ORTHO05D009395 2.9e-75 286.2 312 54.5
A10p05120 Brassica napus HOM05D007438 ORTHO05D009395 3.8e-75 285.8 309 55.7
C05p04710 Brassica napus HOM05D007438 ORTHO05D009395 3.8e-75 285.8 308 55.2
CARHR006070 Cardamine hirsuta HOM05D007438 ORTHO05D009395 9.2e-74 281.2 310 55.2
BraA10t42777Z Brassica rapa HOM05D007438 ORTHO05D009395 3.5e-73 279.3 311 54.0
BcaB02g06796 Brassica carinata HOM05D007438 ORTHO05D009395 1.0e-72 277.7 303 54.8
AL1G16470 Arabidopsis lyrata HOM05D007438 ORTHO05D009395 2.1e-70 270.0 312 55.4
AT1G06460 Arabidopsis thaliana HOM05D007438 ORTHO05D009395 6.2e-70 268.5 311 54.3
Carub.0001s0582 Capsella rubella HOM05D007438 ORTHO05D009395 1.8e-69 266.9 314 54.1
BraA08t35504Z Brassica rapa HOM05D007438 ORTHO05D009395 6.4e-67 258.5 297 54.2
BolC8t47053H Brassica oleracea HOM05D007438 ORTHO05D009395 8.1e-62 241.5 296 50.7
Thhalv10008353m.g Eutrema salsugineum HOM05D007438 ORTHO05D009395 4.5e-60 235.7 260 54.2
BcaB03g13417 Brassica carinata HOM05D000181 ORTHO05D002783 5.8e-60 235.3 262 53.8
Cfa021395 Carpinus fangiana HOM05D007438 ORTHO05D009395 2.7e-49 199.9 304 41.1
C08p02600 Brassica napus HOM05D007438 ORTHO05D009395 6.0e-49 198.7 290 43.8
THA.LOC104800831 Tarenaya hassleriana HOM05D007438 ORTHO05D009395 1.3e-46 191.0 299 39.5
A08p35960 Brassica napus HOM05D007438 ORTHO05D009395 1.2e-41 174.5 295 42.7
Medtr5g091960 Medicago truncatula HOM05D007438 ORTHO05D009395 1.1e-39 167.9 306 38.2
TPR.G12671 Trifolium pratense HOM05D007438 ORTHO05D009395 2.4e-37 160.2 311 37.0
Glyma.14G026100 Glycine max HOM05D007438 ORTHO05D009395 9.0e-37 158.3 310 37.4
Thecc.01G156400 Theobroma cacao HOM05D007438 ORTHO05D009395 9.0e-37 158.3 316 35.8
Glyma.02G288700 Glycine max HOM05D007438 ORTHO05D009395 1.2e-36 157.9 308 37.0
CSS0044063 Camellia sinensis var. sinensis HOM05D007438 ORTHO05D009395 7.6e-36 155.2 308 38.0
Ca_06297_v3 Cicer arietinum L. HOM05D007438 ORTHO05D009395 1.0e-35 154.8 310 36.1
Duzib264G0748 Durio zibethinus HOM05D007438 ORTHO05D009395 1.7e-35 154.1 318 34.9
CSS0040852 Camellia sinensis var. sinensis HOM05D007438 ORTHO05D009395 2.2e-35 153.7 307 38.8
arahy.Tifrunner.gnm1.ann1.2XI8FI Arachis hypogaea HOM05D007438 ORTHO05D009395 3.8e-35 152.9 315 35.6
arahy.Tifrunner.gnm1.ann1.9R49YU Arachis hypogaea HOM05D007438 ORTHO05D009395 3.8e-35 152.9 315 35.6
BcaC07g36810 Brassica carinata HOM05D000181 ORTHO05D002783 1.4e-34 151.0 241 41.1
LjContig00310g0012276 Lotus japonicus HOM05D007438 ORTHO05D009395 1.4e-34 151.0 305 35.7
Ciclev10016256m.g Citrus clementina HOM05D007438 ORTHO05D009395 2.1e-33 147.1 315 35.2
vmacro09194 Vaccinium macrocarpon HOM05D007438 ORTHO05D009395 2.7e-33 146.7 315 34.9
MBI06_g16570_MAGBIO Magnolia biondii HOM05D007438 ORTHO05D009395 3.6e-33 146.4 303 36.3
Lalb_Chr10g0106871 Lupinus albus HOM05D007438 ORTHO05D009395 6.1e-33 145.6 308 34.4
Psat2g015640 Pisum sativum HOM05D007438 ORTHO05D009395 1.0e-32 144.8 306 36.3
Rhsim04G0081300 Rhododendron simsii HOM05D007438 ORTHO05D009395 1.0e-32 144.8 315 34.3
Cpa.g.sc50.57 Carica papaya HOM05D007438 ORTHO05D009395 1.3e-32 144.4 304 34.5
TAR629G3405 Trochodendron aralioides HOM05D007438 ORTHO05D009395 5.1e-32 142.5 305 34.4
Gohir.A09G003800 Gossypium hirsutum HOM05D007438 ORTHO05D009395 8.7e-32 141.7 321 33.3
COL.COLO4_33655 Corchorus olitorius HOM05D007438 ORTHO05D009395 1.1e-31 141.4 306 35.6
Gorai.006G004700 Gossypium raimondii HOM05D007438 ORTHO05D009395 1.5e-31 141.0 266 39.1
Gohir.D09G003400 Gossypium hirsutum HOM05D007438 ORTHO05D009395 3.3e-31 139.8 266 38.7
GSVIVG01020783001 Vitis vinifera HOM05D007438 ORTHO05D009395 5.7e-31 139.0 320 34.1
PGSC0003DMG401017288 Solanum tuberosum HOM05D007438 ORTHO05D009395 9.7e-31 138.3 305 35.7
VMungo1215G1664 Vigna mungo HOM05D007438 ORTHO05D009395 1.3e-30 137.9 291 36.1
arahy.Tifrunner.gnm1.ann1.K6S8U8 Arachis hypogaea HOM05D007438 ORTHO05D009395 1.6e-30 137.5 309 35.0
Eucgr.A01949 Eucalyptus grandis HOM05D007438 ORTHO05D009395 3.7e-30 136.3 304 33.6
CiPaw.03G193300 Carya illinoinensis HOM05D007438 ORTHO05D009395 4.8e-30 136.0 311 32.8
CANSAT64G1631 Cannabis sativa HOM05D007438 ORTHO05D009395 6.3e-30 135.6 308 33.1
QL08p043052 Quercus lobata HOM05D007438 ORTHO05D009395 6.3e-30 135.6 310 33.2
PGR042G1218 Punica granatum HOM05D007438 ORTHO05D009395 8.2e-30 135.2 311 33.4
Sopen07g029090 Solanum pennellii HOM05D007438 ORTHO05D009395 4.5e-28 129.4 314 34.1
MSTRG.6772 Avicennia marina HOM05D007438 ORTHO05D009395 5.9e-28 129.0 306 31.0
EL10Ac9g21031 Beta vulgaris HOM05D007438 ORTHO05D009395 5.9e-28 129.0 316 33.2
HanXRQChr01g0028661 Helianthus annuus HOM05D007438 ORTHO05D009395 5.9e-28 129.0 307 35.2
Solyc07g055720.4 Solanum lycopersicum HOM05D007438 ORTHO05D009395 7.7e-28 128.6 315 33.7
MELO3C014451.2 Cucumis melo HOM05D007438 ORTHO05D009395 1.0e-27 128.3 216 41.2
Atru.chr6.3569 Acer truncatum HOM05D007438 ORTHO05D009395 1.3e-27 127.9 306 33.3
Aqoxy1G01934 Aquilegia oxysepala HOM05D007438 ORTHO05D009395 2.2e-27 127.1 320 31.9
AUR62031789 Chenopodium quinoa HOM05D007438 ORTHO05D009395 2.2e-27 127.1 311 33.1
CAN.G803.12 Capsicum annuum HOM05D007438 ORTHO05D009395 5.0e-27 125.9 307 32.9
Cc05_g09010 Coffea canephora HOM05D007438 ORTHO05D009395 1.4e-26 124.4 229 39.3
Sed0004780 Sechium edule HOM05D007438 ORTHO05D009395 4.2e-26 122.9 224 39.3
ClCG09G022220 Citrullus lanatus HOM05D007438 ORTHO05D009395 5.5e-26 122.5 254 37.8
Migut.M00210 Erythranthe guttata HOM05D007438 ORTHO05D009395 5.5e-26 122.5 214 40.7
CsaV3_6G037900 Cucumis sativus L. HOM05D007438 ORTHO05D009395 9.4e-26 121.7 217 40.1
Manes.01G129800 Manihot esculenta HOM05D007438 ORTHO05D009395 9.4e-26 121.7 287 32.1
Potri.014G141500 Populus trichocarpa HOM05D007438 ORTHO05D009395 9.4e-26 121.7 311 30.9
DCAR_013288 Daucus carota HOM05D007438 ORTHO05D009395 1.2e-25 121.3 300 33.3
Sabra14G0106800 Salix brachista HOM05D007438 ORTHO05D009395 1.2e-25 121.3 300 32.7
SalBow7G1752 Salvia bowleyana HOM05D007438 ORTHO05D009395 2.7e-25 120.2 304 29.6
Peaxi162Scf00154g01024 Petunia axillaris HOM05D007438 ORTHO05D009395 3.6e-25 119.8 295 33.2
Nn3g21054 Nelumbo nucifera HOM05D007438 ORTHO05D009395 1.0e-24 118.2 290 33.1
Actinidia30518 Actinidia chinensis HOM05D007438 ORTHO05D009395 1.4e-24 117.9 314 34.7
CSS0035465 Camellia sinensis var. sinensis HOM05D007438 ORTHO05D009395 1.8e-24 117.5 300 34.3
ECA234G1517 Erigeron canadensis HOM05D007438 ORTHO05D009395 2.3e-24 117.1 309 33.3
Lj3C1012T3 Lonicera japonica HOM05D007438 ORTHO05D009395 3.0e-24 116.7 306 32.0
Prupe.3G108500 Prunus persica HOM05D007438 ORTHO05D009395 3.0e-24 116.7 210 36.2
Hund07732 Selenicereus undatus HOM05D007438 ORTHO05D009395 8.8e-24 115.2 308 29.5
Lsat_1_v5_gn_4_26780 Lactuca sativa HOM05D007438 ORTHO05D009395 2.0e-23 114.0 305 32.8
Phvul.008G264700 Phaseolus vulgaris HOM05D007438 ORTHO05D009395 1.3e-22 111.3 322 30.4
SEGI_11984 Sequoiadendron giganteum HOM05D007438 ORTHO05D009395 2.2e-22 110.5 234 34.2
Nitab4.5_0003133g0060 Nicotiana tabacum HOM05D007438 ORTHO05D009395 1.1e-21 108.2 307 32.2
AUR62023994 Chenopodium quinoa HOM05D007438 ORTHO05D009395 2.4e-21 107.1 299 32.8
Dinv11426 Davidia involucrata HOM05D007438 ORTHO05D009395 1.2e-20 104.8 274 32.1
Sc21g0004330 Simmondsia chinensis HOM05D007438 ORTHO05D009395 5.9e-20 102.4 106 48.1
TWI74G0447 Tripterygium wilfordii HOM05D007438 ORTHO05D009395 5.0e-19 99.4 302 33.1
arahy.Tifrunner.gnm1.ann1.AN6F3M Arachis hypogaea HOM05D007438 ORTHO05D009395 1.2e-17 94.7 201 36.3
HPP92_021771 Vanilla planifolia HOM05D007438 ORTHO05D009395 7.9e-17 92.0 218 33.5
Nitab4.5_0011473g0010 Nicotiana tabacum HOM05D007438 ORTHO05D009395 1.5e-15 87.8 204 32.8
SMO111G0151 Selaginella moellendorffii HOM05D007438 ORTHO05D009395 1.5e-15 87.8 220 29.5
ATR0127G021 Amborella trichopoda HOM05D007438 ORTHO05D009395 2.0e-15 87.4 216 31.9
Nitab4.5_0005259g0040 Nicotiana tabacum HOM05D007438 ORTHO05D009395 7.4e-15 85.5 219 31.5
arahy.Tifrunner.gnm1.ann1.28WURV Arachis hypogaea HOM05D007438 ORTHO05D009395 2.2e-14 84.0 89 49.4
TAR626G1821 Trochodendron aralioides HOM05D007438 ORTHO05D009395 2.4e-13 80.5 245 31.4
Sc21g0004320 Simmondsia chinensis HOM05D007438 ORTHO05D009395 4.1e-13 79.7 156 39.1
Mapoly0109s0048 Marchantia polymorpha HOM05D007438 ORTHO05D009395 5.9e-12 75.9 306 26.8
Phvul.003G195300 Phaseolus vulgaris HOM05D007438 ORTHO05D009395 2.7e-09 67.0 128 39.1
Eucgr.G00061 Eucalyptus grandis HOM05D000136 ORTHO05D000080 7.5e-07 58.9 82 39.0
Lj1g0022257 Lotus japonicus HOM05D000136 ORTHO05D000080 1.3e-06 58.2 138 31.9
Haze_09969 Corylus avellana HOM05D000136 ORTHO05D000080 2.8e-06 57.0 92 37.0
HanXRQChr17g0565881 Helianthus annuus HOM05D007438 ORTHO05D009395 2.8e-06 57.0 83 45.8
Ah.02g128490 Amaranthus hybridus HOM05D000136 ORTHO05D000080 4.8e-06 56.2 88 31.8
ClCG10G007510 Citrullus lanatus HOM05D000136 ORTHO05D000080 4.8e-06 56.2 89 36.0
MBI10_g17800_MAGBIO Magnolia biondii HOM05D000136 ORTHO05D000080 4.8e-06 56.2 91 34.1
Atru.chr7.1909 Acer truncatum HOM05D000136 ORTHO05D000080 6.3e-06 55.8 93 33.3
TWI34G1115 Tripterygium wilfordii HOM05D000136 ORTHO05D000080 6.3e-06 55.8 95 34.7
CAN.G853.6 Capsicum annuum HOM05D000136 ORTHO05D000080 8.2e-06 55.5 93 33.3
PSO801G0292 Papaver somniferum HOM05D000136 ORTHO05D000080 8.2e-06 55.5 94 36.2
SEGI_36908 Sequoiadendron giganteum HOM05D000136 ORTHO05D000080 8.2e-06 55.5 90 33.3


User provided reference genes

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