Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aa31LG1G3110 Aethionema arabicum HOM05D005226 ORTHO05D004666 9.6e-56 219.9 112 100.0
Thhalv10009573m.g Eutrema salsugineum HOM05D005226 ORTHO05D004666 2.2e-36 155.6 115 72.2
CARHR011960 Cardamine hirsuta HOM05D005226 ORTHO05D004666 1.6e-34 149.4 115 69.6
AL1G22790 Arabidopsis lyrata HOM05D005226 ORTHO05D004666 6.1e-34 147.5 114 71.1
AT1G11655 Arabidopsis thaliana HOM05D005226 ORTHO05D004666 1.4e-33 146.4 114 69.3
Carub.0001s1129 Capsella rubella HOM05D005226 ORTHO05D004666 8.8e-33 143.7 116 71.6
A09p64400 Brassica napus HOM05D005226 ORTHO05D004666 1.5e-32 142.9 115 67.8
BraA09t41784Z Brassica rapa HOM05D005226 ORTHO05D004666 1.5e-32 142.9 115 67.8
BcaNung04807 Brassica carinata HOM05D005226 ORTHO05D004666 2.6e-32 142.1 115 67.0
C08p48100 Brassica napus HOM05D005226 ORTHO05D004666 2.6e-32 142.1 115 68.7
BcaB08g37410 Brassica carinata HOM05D005226 ORTHO05D004666 2.2e-31 139.0 115 67.0
BcaC07g41768 Brassica carinata HOM05D005226 ORTHO05D004666 2.2e-31 139.0 115 67.8
BcaC07g38677 Brassica carinata HOM05D005226 ORTHO05D004666 3.7e-31 138.3 116 62.9
A08p33360 Brassica napus HOM05D005226 ORTHO05D004666 3.7e-31 138.3 115 63.5
BolC5t29718H Brassica oleracea HOM05D005226 ORTHO05D004666 3.7e-31 138.3 115 64.3
BolC8t49112H Brassica oleracea HOM05D005226 ORTHO05D004666 3.7e-31 138.3 116 62.9
A06p08210 Brassica napus HOM05D005226 ORTHO05D004666 6.3e-31 137.5 115 64.3
BraA06t24021Z Brassica rapa HOM05D005226 ORTHO05D004666 6.3e-31 137.5 115 64.3
C05p09770 Brassica napus HOM05D005226 ORTHO05D004666 1.4e-30 136.3 115 63.5
BcaC05g25032 Brassica carinata HOM05D005226 ORTHO05D004666 3.1e-30 135.2 115 63.5
BraA08t35253Z Brassica rapa HOM05D005226 ORTHO05D004666 3.1e-30 135.2 115 62.6
C08p14770 Brassica napus HOM05D005226 ORTHO05D004666 1.1e-27 126.7 117 59.8
BcaB03g13244 Brassica carinata HOM05D005226 ORTHO05D004666 2.3e-25 119.0 117 56.4
THA.LOC104818840 Tarenaya hassleriana HOM05D005226 ORTHO05D004666 1.3e-23 113.2 118 55.9
COL.COLO4_31758 Corchorus olitorius HOM05D005226 ORTHO05D004666 2.2e-15 85.9 112 44.6
Duzib160G0401 Durio zibethinus HOM05D005226 ORTHO05D004666 6.3e-15 84.3 112 45.5
Thecc.06G219100 Theobroma cacao HOM05D005226 ORTHO05D004666 1.4e-14 83.2 110 45.5
Duzib235G0113 Durio zibethinus HOM05D005226 ORTHO05D004666 1.8e-14 82.8 112 43.8
Manes.16G008100 Manihot esculenta HOM05D005226 ORTHO05D004666 1.8e-14 82.8 107 49.5
Gohir.D05G172800 Gossypium hirsutum HOM05D005226 ORTHO05D004666 1.6e-13 79.7 114 43.0
Thecc.06G087600 Theobroma cacao HOM05D005226 ORTHO05D004666 1.6e-13 79.7 110 44.5
Gorai.009G178000 Gossypium raimondii HOM05D005226 ORTHO05D004666 2.7e-13 79.0 114 43.0
Ciclev10017536m.g Citrus clementina HOM05D005226 ORTHO05D004666 5.9e-13 77.8 109 42.2
Gohir.A05G169600 Gossypium hirsutum HOM05D005226 ORTHO05D004666 5.9e-13 77.8 114 43.0
Gohir.A10G013400 Gossypium hirsutum HOM05D005226 ORTHO05D004666 5.9e-13 77.8 124 37.1
Cc09_g01800 Coffea canephora HOM05D005226 ORTHO05D004666 7.7e-13 77.4 111 43.2
TWI38G0534 Tripterygium wilfordii HOM05D005226 ORTHO05D004666 7.7e-13 77.4 71 57.7
Glyma.15G107000 Glycine max HOM05D005226 ORTHO05D004666 1.0e-12 77.0 96 44.8
Glyma.13G205400 Glycine max HOM05D005226 ORTHO05D004666 2.2e-12 75.9 96 45.8
Gohir.D10G013300 Gossypium hirsutum HOM05D005226 ORTHO05D004666 2.9e-12 75.5 118 37.3
Gorai.011G015000 Gossypium raimondii HOM05D005226 ORTHO05D004666 2.9e-12 75.5 118 37.3
Potri.004G016800 Populus trichocarpa HOM05D005226 ORTHO05D004666 2.9e-12 75.5 105 43.8
BolC8t52343H Brassica oleracea HOM05D005226 ORTHO05D004666 3.8e-12 75.1 63 63.5
Potri.011G002100 Populus trichocarpa HOM05D005226 ORTHO05D004666 5.0e-12 74.7 110 43.6
TAR627G0695 Trochodendron aralioides HOM05D005226 ORTHO05D004666 6.5e-12 74.3 96 42.7
Sabra04G0009100 Salix brachista HOM05D005226 ORTHO05D004666 8.5e-12 73.9 87 49.4
Haze_09878 Corylus avellana HOM05D005226 ORTHO05D004666 1.1e-11 73.6 108 42.6
Duzib192G0836 Durio zibethinus HOM05D005226 ORTHO05D004666 1.5e-11 73.2 114 41.2
Cfa021903 Carpinus fangiana HOM05D005226 ORTHO05D004666 4.2e-11 71.6 111 41.4
Medtr2g022960 Medicago truncatula HOM05D005226 ORTHO05D004666 4.2e-11 71.6 70 51.4
Gorai.010G180000 Gossypium raimondii HOM05D005226 ORTHO05D004666 5.5e-11 71.2 95 43.2
Gohir.D06G153975 Gossypium hirsutum HOM05D005226 ORTHO05D004666 1.2e-10 70.1 95 43.2
Nn1g03549 Nelumbo nucifera HOM05D005226 ORTHO05D004666 1.2e-10 70.1 112 39.3
Phvul.006G150300 Phaseolus vulgaris HOM05D005226 ORTHO05D004666 1.2e-10 70.1 102 42.2
Lsat_1_v5_gn_4_59601 Lactuca sativa HOM05D005226 ORTHO05D004666 1.6e-10 69.7 82 41.5
Migut.M01309 Erythranthe guttata HOM05D005226 ORTHO05D004666 2.1e-10 69.3 110 39.1
Prupe.4G022200 Prunus persica HOM05D005226 ORTHO05D004666 2.1e-10 69.3 68 50.0
Aqoxy4G01362 Aquilegia oxysepala HOM05D005226 ORTHO05D004666 2.7e-10 68.9 86 44.2
Dinv20040 Davidia involucrata HOM05D005226 ORTHO05D004666 2.7e-10 68.9 73 49.3
Oeu051213.1 Olea europaea HOM05D005226 ORTHO05D004666 3.6e-10 68.6 94 42.6
CiPaw.10G070100 Carya illinoinensis HOM05D005226 ORTHO05D004666 4.7e-10 68.2 102 42.2
Gohir.A06G148050 Gossypium hirsutum HOM05D005226 ORTHO05D004666 6.1e-10 67.8 95 41.1
VMungo0540G0286 Vigna mungo HOM05D005226 ORTHO05D004666 6.1e-10 67.8 70 48.6
Atru.chr10.2207 Acer truncatum HOM05D005226 ORTHO05D004666 8.0e-10 67.4 112 42.0
Eucgr.E04074 Eucalyptus grandis HOM05D005226 ORTHO05D004666 8.0e-10 67.4 71 52.1
TPR.G7637 Trifolium pratense HOM05D005226 ORTHO05D004666 8.0e-10 67.4 70 47.1
Aqoxy1G03603 Aquilegia oxysepala HOM05D005226 ORTHO05D004666 1.0e-09 67.0 74 45.9
Lalb_Chr18g0056301 Lupinus albus HOM05D005226 ORTHO05D004666 1.0e-09 67.0 102 40.2
QL05p073519 Quercus lobata HOM05D005226 ORTHO05D004666 1.4e-09 66.6 82 41.5
QL05p073756 Quercus lobata HOM05D005226 ORTHO05D004666 1.4e-09 66.6 82 41.5
Nn5g29365 Nelumbo nucifera HOM05D005226 ORTHO05D004666 1.8e-09 66.2 110 39.1
CANSAT56G2875 Cannabis sativa HOM05D005226 ORTHO05D004666 2.3e-09 65.9 98 43.9
Peaxi162Scf00565g00021 Petunia axillaris HOM05D005226 ORTHO05D004666 3.0e-09 65.5 70 45.7
PGR004G1778 Punica granatum HOM05D005226 ORTHO05D004666 3.0e-09 65.5 86 43.0
CiPaw.09G090600 Carya illinoinensis HOM05D005226 ORTHO05D004666 4.0e-09 65.1 94 43.6
Hma1.2p1_1142F.1_g260990 Hydrangea macrophylla HOM05D005226 ORTHO05D004666 4.0e-09 65.1 70 45.7
Eucgr.E04072 Eucalyptus grandis HOM05D005226 ORTHO05D004666 5.2e-09 64.7 71 49.3
Lalb_Chr15g0087551 Lupinus albus HOM05D005226 ORTHO05D004666 5.2e-09 64.7 70 48.6
TAR624G0719 Trochodendron aralioides HOM05D005226 ORTHO05D004666 5.2e-09 64.7 74 43.2
MELO3C007384.2 Cucumis melo HOM05D005226 ORTHO05D004666 6.8e-09 64.3 67 50.7
ECA234G1355 Erigeron canadensis HOM05D005226 ORTHO05D004666 6.8e-09 64.3 77 40.3
HanXRQChr16g0515991 Helianthus annuus HOM05D005226 ORTHO05D004666 8.8e-09 63.9 78 41.0
MD05G1344200 Malus domestica HOM05D005226 ORTHO05D004666 8.8e-09 63.9 70 50.0
Eucgr.D01311 Eucalyptus grandis HOM05D005226 ORTHO05D004666 1.2e-08 63.5 87 41.4
Oeu033894.1 Olea europaea HOM05D005226 ORTHO05D004666 1.2e-08 63.5 98 36.7
SGA_v2.0_scaffold89G27461 Striga asiatica HOM05D005226 ORTHO05D004666 1.2e-08 63.5 94 41.5
ClCG03G004790 Citrullus lanatus HOM05D005226 ORTHO05D004666 1.5e-08 63.2 97 34.0
Lj6g0027274 Lotus japonicus HOM05D005226 ORTHO05D004666 2.6e-08 62.4 70 45.7
FvH4_3g02270 Fragaria vesca HOM05D005226 ORTHO05D004666 3.4e-08 62.0 61 50.8
Eucgr.E04071 Eucalyptus grandis HOM05D005226 ORTHO05D004666 4.4e-08 61.6 71 47.9
Nitab4.5_0003254g0050 Nicotiana tabacum HOM05D005226 ORTHO05D004666 4.4e-08 61.6 99 33.3
Rhsim02G0109500 Rhododendron simsii HOM05D005226 ORTHO05D004666 4.4e-08 61.6 109 35.8
Sed0005209 Sechium edule HOM05D005226 ORTHO05D004666 4.4e-08 61.6 82 40.2
ClCG01G022050 Citrullus lanatus HOM05D005226 ORTHO05D004666 7.5e-08 60.8 65 46.2
FAN25G2807 Fragaria x ananassa HOM05D005226 ORTHO05D004666 7.5e-08 60.8 61 50.8
Cfa000235 Carpinus fangiana HOM05D005226 ORTHO05D004666 9.8e-08 60.5 112 37.5
SGA_v2.0_scaffold4G01918 Striga asiatica HOM05D005226 ORTHO05D004666 9.8e-08 60.5 71 42.3
MD00G1206700 Malus domestica HOM05D005226 ORTHO05D004666 1.3e-07 60.1 61 52.5
MD10G1320200 Malus domestica HOM05D005226 ORTHO05D004666 1.3e-07 60.1 61 52.5
RcHm_v2.0_Chr5g0003391 Rosa chinensis HOM05D005226 ORTHO05D004666 1.3e-07 60.1 61 47.5
MSTRG.13145 Avicennia marina HOM05D005226 ORTHO05D004666 1.7e-07 59.7 64 53.1
Nitab4.5_0000005g0440 Nicotiana tabacum HOM05D005226 ORTHO05D004666 1.7e-07 59.7 111 35.1
Rhsim02G0108200 Rhododendron simsii HOM05D005226 ORTHO05D004666 1.7e-07 59.7 97 36.1
THA.LOC104806304 Tarenaya hassleriana HOM05D005226 ORTHO05D004666 1.7e-07 59.7 120 34.2
CsaV3_6G049110 Cucumis sativus L. HOM05D005226 ORTHO05D004666 2.2e-07 59.3 69 44.9
MELO3C002462.2 Cucumis melo HOM05D005226 ORTHO05D004666 2.8e-07 58.9 97 33.0
DCAR_004212 Daucus carota HOM05D005226 ORTHO05D004666 2.8e-07 58.9 96 39.6
Rhsim02G0108700 Rhododendron simsii HOM05D005226 ORTHO05D004666 2.8e-07 58.9 97 37.1
CsaV3_1G010830 Cucumis sativus L. HOM05D005226 ORTHO05D004666 6.3e-07 57.8 86 33.7
Medtr3g463740 Medicago truncatula HOM05D005226 ORTHO05D004666 6.3e-07 57.8 69 46.4
SalBow8G4932 Salvia bowleyana HOM05D005226 ORTHO05D004666 1.1e-06 57.0 53 56.6
Eucgr.D01314 Eucalyptus grandis HOM05D005226 ORTHO05D004666 1.4e-06 56.6 66 40.9
Solyc02g080450.1 Solanum lycopersicum HOM05D005226 ORTHO05D004666 1.4e-06 56.6 107 31.8
DCAR_008143 Daucus carota HOM05D005226 ORTHO05D004666 1.8e-06 56.2 72 43.1
Eucgr.L02166 Eucalyptus grandis HOM05D005226 ORTHO05D004666 1.8e-06 56.2 66 42.4
Sed0027353 Sechium edule HOM05D005226 ORTHO05D004666 1.8e-06 56.2 77 35.1
Sed0011520 Sechium edule HOM05D005226 ORTHO05D004666 2.4e-06 55.8 86 31.4
Sopen02g025140 Solanum pennellii HOM05D005226 ORTHO05D004666 2.4e-06 55.8 107 31.8
Glyma.18G063800 Glycine max HOM05D005226 ORTHO05D004666 3.1e-06 55.5 78 38.5
PGSC0003DMG400004522 Solanum tuberosum HOM05D005226 ORTHO05D004666 3.1e-06 55.5 69 40.6
ATR0752G088 Amborella trichopoda HOM05D005226 ORTHO05D004666 5.4e-06 54.7 96 40.6
PSO832G1518 Papaver somniferum HOM05D005226 ORTHO05D004666 5.4e-06 54.7 68 38.2
EL10Ac8g20036 Beta vulgaris HOM05D005226 ORTHO05D004666 9.1e-06 53.9 63 46.0


User provided reference genes

Program Settings