Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aa31LG1G28260 Aethionema arabicum HOM05D006867 ORTHO05D008676 0.0e+00 1208.7 635 100.0
Sp4g28920 Schrenkiella parvula HOM05D006867 ORTHO05D008676 2.0e-262 909.1 641 75.4
Thhalv10001357m.g Eutrema salsugineum HOM05D006867 ORTHO05D008676 8.5e-258 893.6 643 77.1
AL4G46360 Arabidopsis lyrata HOM05D006867 ORTHO05D008676 6.1e-256 887.5 647 76.0
Carub.0004s2962 Capsella rubella HOM05D006867 ORTHO05D008676 7.2e-249 864.0 644 74.2
AT2G46900 Arabidopsis thaliana HOM05D006867 ORTHO05D008676 6.7e-247 857.4 653 73.2
CARHR142250 Cardamine hirsuta HOM05D006867 ORTHO05D008676 3.4e-238 828.6 637 73.2
A05p00940 Brassica napus HOM05D006867 ORTHO05D008676 1.7e-234 816.2 640 71.4
THA.LOC104817409 Tarenaya hassleriana HOM05D006867 ORTHO05D008676 1.5e-233 813.1 648 67.7
BolC4t21761H Brassica oleracea HOM05D006867 ORTHO05D008676 3.2e-233 812.0 646 70.1
C04p01080 Brassica napus HOM05D006867 ORTHO05D008676 9.2e-228 793.9 627 71.5
COL.COLO4_23081 Corchorus olitorius HOM05D006867 ORTHO05D008676 1.5e-214 750.0 632 64.6
Thecc.01G329400 Theobroma cacao HOM05D006867 ORTHO05D008676 7.5e-214 747.7 632 63.9
Ciclev10019260m.g Citrus clementina HOM05D006867 ORTHO05D008676 4.1e-212 741.9 653 62.6
Gohir.A12G118400 Gossypium hirsutum HOM05D006867 ORTHO05D008676 5.6e-209 731.5 630 63.5
Gohir.D12G122200 Gossypium hirsutum HOM05D006867 ORTHO05D008676 3.1e-207 725.7 627 63.3
Gorai.008G133000 Gossypium raimondii HOM05D006867 ORTHO05D008676 5.2e-207 724.9 627 63.3
Atru.chr5.813 Acer truncatum HOM05D006867 ORTHO05D008676 8.9e-207 724.2 606 63.7
Manes.01G237400 Manihot esculenta HOM05D006867 ORTHO05D008676 1.3e-205 720.3 646 60.5
Potri.002G183500 Populus trichocarpa HOM05D006867 ORTHO05D008676 2.5e-201 706.1 650 61.2
CiPaw.02G046400 Carya illinoinensis HOM05D006867 ORTHO05D008676 3.3e-201 705.7 592 61.7
QL08p048171 Quercus lobata HOM05D006867 ORTHO05D008676 3.3e-201 705.7 611 61.5
BcaC02g12633 Brassica carinata HOM05D006867 ORTHO05D008676 1.1e-199 700.7 641 64.9
Sabra14G0080800 Salix brachista HOM05D006867 ORTHO05D008676 1.8e-199 699.9 631 62.6
CANSAT56G0208 Cannabis sativa HOM05D006867 ORTHO05D008676 2.6e-198 696.0 648 59.0
CANSAT56G2490 Cannabis sativa HOM05D006867 ORTHO05D008676 2.9e-197 692.6 648 58.8
Potri.014G109500 Populus trichocarpa HOM05D006867 ORTHO05D008676 6.4e-197 691.4 634 61.0
Sabra02G0132100 Salix brachista HOM05D006867 ORTHO05D008676 4.1e-196 688.7 636 61.9
Lalb_Chr10g0101011 Lupinus albus HOM05D006867 ORTHO05D008676 2.7e-195 686.0 642 58.7
GSVIVG01027485001 Vitis vinifera HOM05D006867 ORTHO05D008676 3.5e-195 685.6 572 62.4
Prupe.2G203900 Prunus persica HOM05D006867 ORTHO05D008676 3.3e-193 679.1 637 59.2
Dinv32661 Davidia involucrata HOM05D006867 ORTHO05D008676 5.6e-193 678.3 613 58.9
Lj9A610G56 Lonicera japonica HOM05D006867 ORTHO05D008676 4.7e-192 675.2 651 57.1
Actinidia08011 Actinidia chinensis HOM05D006867 ORTHO05D008676 8.1e-192 674.5 656 55.8
Cc00_g15760 Coffea canephora HOM05D006867 ORTHO05D008676 4.0e-191 672.2 592 59.8
arahy.Tifrunner.gnm1.ann1.L7530T Arachis hypogaea HOM05D006867 ORTHO05D008676 4.4e-190 668.7 668 56.6
Haze_15774 Corylus avellana HOM05D006867 ORTHO05D008676 4.4e-190 668.7 629 58.7
Lj3g0022605 Lotus japonicus HOM05D006867 ORTHO05D008676 4.4e-190 668.7 645 58.4
Phvul.010G121700 Phaseolus vulgaris HOM05D006867 ORTHO05D008676 9.9e-190 667.5 651 57.1
arahy.Tifrunner.gnm1.ann1.Y7T28V Arachis hypogaea HOM05D006867 ORTHO05D008676 1.7e-189 666.8 668 56.6
Cfa003709 Carpinus fangiana HOM05D006867 ORTHO05D008676 2.4e-188 662.9 628 60.2
Lalb_Chr17g0343131 Lupinus albus HOM05D006867 ORTHO05D008676 9.3e-188 661.0 654 55.8
Glyma.07G047300 Glycine max HOM05D006867 ORTHO05D008676 1.6e-187 660.2 647 57.0
VMungo0331G1883 Vigna mungo HOM05D006867 ORTHO05D008676 3.5e-187 659.1 649 58.2
Glyma.16G015800 Glycine max HOM05D006867 ORTHO05D008676 4.6e-187 658.7 650 57.2
TAR629G2918 Trochodendron aralioides HOM05D006867 ORTHO05D008676 8.7e-186 654.4 641 56.9
RcHm_v2.0_Chr1g0361851 Rosa chinensis HOM05D006867 ORTHO05D008676 7.3e-185 651.4 584 58.2
MD07G1165200 Malus domestica HOM05D006867 ORTHO05D008676 9.6e-185 651.0 624 57.4
FAN06G0390 Fragaria x ananassa HOM05D006867 ORTHO05D008676 1.3e-184 650.6 651 56.7
FAN06G3784 Fragaria x ananassa HOM05D006867 ORTHO05D008676 1.6e-184 650.2 625 57.6
Medtr8g023750 Medicago truncatula HOM05D006867 ORTHO05D008676 1.6e-184 650.2 640 57.0
EL10Ac9g22256 Beta vulgaris HOM05D006867 ORTHO05D008676 2.8e-184 649.4 647 54.9
Ca_23461_v3 Cicer arietinum L. HOM05D006867 ORTHO05D008676 6.2e-184 648.3 643 56.6
Ca_23474_v3 Cicer arietinum L. HOM05D006867 ORTHO05D008676 6.2e-184 648.3 643 56.6
HanXRQChr15g0480381 Helianthus annuus HOM05D006867 ORTHO05D008676 6.2e-184 648.3 631 55.5
MBI11_g13783_MAGBIO Magnolia biondii HOM05D006867 ORTHO05D008676 1.8e-183 646.7 636 55.0
FvH4_7g18270 Fragaria vesca HOM05D006867 ORTHO05D008676 2.4e-183 646.4 651 56.2
FAN10G4369 Fragaria x ananassa HOM05D006867 ORTHO05D008676 4.0e-183 645.6 628 57.5
MD01G1098500 Malus domestica HOM05D006867 ORTHO05D008676 5.3e-183 645.2 645 56.6
Psat0s2980g0160 Pisum sativum HOM05D006867 ORTHO05D008676 6.9e-183 644.8 643 56.3
Sed0008932 Sechium edule HOM05D006867 ORTHO05D008676 1.5e-182 643.7 649 54.9
MSTRG.10869 Avicennia marina HOM05D006867 ORTHO05D008676 2.6e-182 642.9 496 64.1
FAN01G1143 Fragaria x ananassa HOM05D006867 ORTHO05D008676 2.6e-182 642.9 629 57.2
FAN03G0961 Fragaria x ananassa HOM05D006867 ORTHO05D008676 2.6e-182 642.9 629 57.2
Nitab4.5_0004754g0040 Nicotiana tabacum HOM05D006867 ORTHO05D008676 4.9e-181 638.6 638 53.6
ClCG05G000080 Citrullus lanatus HOM05D006867 ORTHO05D008676 8.4e-181 637.9 525 60.4
CsaV3_3G007140 Cucumis sativus L. HOM05D006867 ORTHO05D008676 8.4e-181 637.9 648 52.8
Nitab4.5_0000348g0180 Nicotiana tabacum HOM05D006867 ORTHO05D008676 1.4e-180 637.1 651 52.1
FAN10G3600 Fragaria x ananassa HOM05D006867 ORTHO05D008676 3.2e-180 636.0 588 58.0
Oeu032684.1 Olea europaea HOM05D006867 ORTHO05D008676 5.4e-180 635.2 662 53.8
Sc08g0001320 Simmondsia chinensis HOM05D006867 ORTHO05D008676 5.4e-180 635.2 621 55.4
vmacro08516 Vaccinium macrocarpon HOM05D006867 ORTHO05D008676 9.3e-180 634.4 532 60.2
Hund00158 Selenicereus undatus HOM05D006867 ORTHO05D008676 2.1e-179 633.3 498 62.4
Migut.I01214 Erythranthe guttata HOM05D006867 ORTHO05D008676 4.6e-179 632.1 667 51.9
TPR.G32787 Trifolium pratense HOM05D006867 ORTHO05D008676 2.3e-178 629.8 645 56.0
Aqoxy5G04385 Aquilegia oxysepala HOM05D006867 ORTHO05D008676 3.0e-178 629.4 647 54.9
Lsat_1_v5_gn_3_39660 Lactuca sativa HOM05D006867 ORTHO05D008676 3.0e-178 629.4 653 53.6
ATR0824G236 Amborella trichopoda HOM05D006867 ORTHO05D008676 3.9e-178 629.0 644 53.0
Ah.01g010880 Amaranthus hybridus HOM05D006867 ORTHO05D008676 2.1e-176 623.2 646 53.1
AUR62010330 Chenopodium quinoa HOM05D006867 ORTHO05D008676 3.7e-176 622.5 641 54.0
SalBow6G1414 Salvia bowleyana HOM05D006867 ORTHO05D008676 8.1e-176 621.3 524 59.7
Sopen08g006420 Solanum pennellii HOM05D006867 ORTHO05D008676 1.1e-175 620.9 514 59.3
TWI59G0124 Tripterygium wilfordii HOM05D006867 ORTHO05D008676 1.1e-175 620.9 650 54.2
CAN.G90.6 Capsicum annuum HOM05D006867 ORTHO05D008676 1.8e-175 620.2 656 52.1
Eucgr.L00743 Eucalyptus grandis HOM05D006867 ORTHO05D008676 1.5e-174 617.1 658 54.4
AUR62039056 Chenopodium quinoa HOM05D006867 ORTHO05D008676 2.6e-174 616.3 641 52.9
SGA_v2.0_scaffold122G33256 Striga asiatica HOM05D006867 ORTHO05D008676 6.4e-173 611.7 518 58.9
PSO782G1247 Papaver somniferum HOM05D006867 ORTHO05D008676 2.4e-172 609.8 658 52.6
Hma1.2p1_0074F.1_g039020 Hydrangea macrophylla HOM05D006867 ORTHO05D008676 1.6e-171 607.1 444 66.7
Rhsim04G0175800 Rhododendron simsii HOM05D006867 ORTHO05D008676 5.6e-169 598.6 609 52.9
HanXRQChr17g0542101 Helianthus annuus HOM05D006867 ORTHO05D008676 9.6e-169 597.8 646 50.2
HPP92_013529 Vanilla planifolia HOM05D006867 ORTHO05D008676 1.3e-168 597.4 516 55.8
FAN01G0521 Fragaria x ananassa HOM05D006867 ORTHO05D008676 3.7e-168 595.9 454 63.0
Os09g0514900 Oryza sativa ssp. japonica HOM05D006867 ORTHO05D008676 3.7e-160 569.3 599 49.2
Zm00001eb102740 Zea mays HOM05D006867 ORTHO05D008676 8.2e-160 568.2 646 49.2
ECA246G2438 Erigeron canadensis HOM05D006867 ORTHO05D008676 7.2e-156 555.1 511 55.8
DCAR_022120 Daucus carota HOM05D006867 ORTHO05D008676 1.9e-153 547.0 632 49.2
CSS0030251 Camellia sinensis var. sinensis HOM05D006867 ORTHO05D008676 1.1e-151 541.2 514 55.8
Peaxi162Scf01205g00180 Petunia axillaris HOM05D006867 ORTHO05D008676 5.1e-146 522.3 386 63.5
Cpa.g.sc1043.2 Carica papaya HOM05D006867 ORTHO05D008676 2.8e-144 516.5 353 70.0
MELO3C005936.2 Cucumis melo HOM05D006867 ORTHO05D008676 7.0e-127 458.8 359 62.4
Pp3c1_12740 Physcomitrium patens HOM05D006867 ORTHO05D008676 1.3e-120 438.0 531 43.5
CDE09G1372 Ceratophyllum demersum HOM05D006867 ORTHO05D008676 5.5e-116 422.5 510 45.3
AagrBONN_evm.TU.Sc2ySwM_344.4360 Anthoceros agrestis HOM05D006867 ORTHO05D008676 4.0e-114 416.4 534 42.9
Pp3c11_2510 Physcomitrium patens HOM05D006867 ORTHO05D008676 4.4e-113 412.9 603 40.8
SMO331G0055 Selaginella moellendorffii HOM05D006867 ORTHO05D008676 5.7e-113 412.5 487 44.4
Mapoly0002s0219 Marchantia polymorpha HOM05D006867 ORTHO05D008676 3.5e-110 403.3 506 43.1
Cre11.g467639 Chlamydomonas reinhardtii HOM05D006867 ORTHO05D008676 1.4e-79 301.6 525 35.4
CBR_g36359 Chara braunii HOM05D006867 ORTHO05D008676 4.2e-79 300.1 668 29.6
PRCOL_00004033 Prasinoderma coloniale HOM05D006867 ORTHO05D008676 3.1e-58 230.7 542 29.7
MCO10G037 Micromonas commoda HOM05D006867 ORTHO05D008676 8.2e-51 206.1 511 28.8
Solyc08g016090.4 Solanum lycopersicum HOM05D006867 ORTHO05D008676 1.3e-40 172.2 410 29.0
C04p72500 Brassica napus HOM05D006867 ORTHO05D008676 6.7e-37 159.8 100 78.0
BolC4t28738H Brassica oleracea HOM05D006867 ORTHO05D008676 6.7e-37 159.8 100 78.0
A04p34720 Brassica napus HOM05D006867 ORTHO05D008676 1.4e-34 152.1 98 76.5
Cfa022788 Carpinus fangiana HOM05D006867 ORTHO05D008676 5.0e-16 90.5 429 24.7
BcaC02g11600 Brassica carinata HOM05D024878 ORTHO05D039720 8.0e-06 56.6 70 50.0


User provided reference genes

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