Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aa31LG1G26140 Aethionema arabicum HOM05D005798 ORTHO05D007269 9.0e-226 786.6 391 100.0
AL4G43620 Arabidopsis lyrata HOM05D005798 ORTHO05D007269 3.0e-181 638.6 396 80.6
Sp4g26670 Schrenkiella parvula HOM05D005798 ORTHO05D007269 9.1e-178 627.1 394 79.7
AT2G44580 Arabidopsis thaliana HOM05D005798 ORTHO05D007269 5.5e-175 617.8 397 79.3
CARHR139800 Cardamine hirsuta HOM05D005798 ORTHO05D007269 1.1e-167 593.6 389 76.1
BraA05t19450Z Brassica rapa HOM05D005798 ORTHO05D007269 7.2e-167 590.9 393 75.6
BcaC02g12292 Brassica carinata HOM05D005798 ORTHO05D007269 1.6e-166 589.7 393 75.6
C04p05550 Brassica napus HOM05D005798 ORTHO05D007269 1.6e-166 589.7 393 75.6
Thhalv10001723m.g Eutrema salsugineum HOM05D005798 ORTHO05D007269 4.7e-166 588.2 371 79.5
BolC4t22185H Brassica oleracea HOM05D005798 ORTHO05D007269 6.1e-166 587.8 393 75.3
THA.LOC104817171 Tarenaya hassleriana HOM05D005798 ORTHO05D007269 8.0e-166 587.4 389 73.0
A05p04740 Brassica napus HOM05D005798 ORTHO05D007269 2.3e-165 585.9 393 74.6
Carub.0004s2713 Capsella rubella HOM05D005798 ORTHO05D007269 3.4e-164 582.0 398 74.1
BcaB02g08835 Brassica carinata HOM05D005798 ORTHO05D007269 2.9e-163 578.9 394 74.6
QL04p025438 Quercus lobata HOM05D005798 ORTHO05D007269 3.1e-141 505.8 389 64.3
Cc02_g25760 Coffea canephora HOM05D005798 ORTHO05D007269 4.4e-140 501.9 393 61.3
Thecc.10G001400 Theobroma cacao HOM05D005798 ORTHO05D007269 4.1e-138 495.4 388 62.4
CiPaw.13G020800 Carya illinoinensis HOM05D005798 ORTHO05D007269 7.1e-138 494.6 388 63.1
Ciclev10020482m.g Citrus clementina HOM05D005798 ORTHO05D007269 1.2e-137 493.8 388 62.4
vmacro21093 Vaccinium macrocarpon HOM05D005798 ORTHO05D007269 2.1e-137 493.0 385 62.6
FAN26G0835 Fragaria x ananassa HOM05D005798 ORTHO05D007269 3.9e-136 488.8 389 61.2
Sabra16G0226600 Salix brachista HOM05D005798 ORTHO05D007269 6.6e-136 488.0 396 61.9
Gorai.011G295600 Gossypium raimondii HOM05D005798 ORTHO05D007269 1.1e-135 487.3 390 62.6
FvH4_1g25731 Fragaria vesca HOM05D005798 ORTHO05D007269 1.9e-135 486.5 389 60.9
Potri.001G346900 Populus trichocarpa HOM05D005798 ORTHO05D007269 1.9e-135 486.5 396 61.6
CSS0042045 Camellia sinensis var. sinensis HOM05D005798 ORTHO05D007269 2.5e-135 486.1 385 62.9
Gohir.A10G242600 Gossypium hirsutum HOM05D005798 ORTHO05D007269 3.3e-135 485.7 389 62.2
CANSAT21G0894 Cannabis sativa HOM05D005798 ORTHO05D007269 1.2e-134 483.8 386 61.9
Manes.05G060100 Manihot esculenta HOM05D005798 ORTHO05D007269 1.2e-134 483.8 389 63.5
Duzib128G1323 Durio zibethinus HOM05D005798 ORTHO05D007269 1.6e-134 483.4 388 61.6
FAN23G2651 Fragaria x ananassa HOM05D005798 ORTHO05D007269 2.1e-134 483.0 389 60.9
FAN28G0191 Fragaria x ananassa HOM05D005798 ORTHO05D007269 3.6e-134 482.3 389 60.4
Prupe.2G112300 Prunus persica HOM05D005798 ORTHO05D007269 3.6e-134 482.3 389 61.7
MD07G1086000 Malus domestica HOM05D005798 ORTHO05D007269 1.1e-133 480.7 389 60.7
RcHm_v2.0_Chr1g0343251 Rosa chinensis HOM05D005798 ORTHO05D007269 1.1e-133 480.7 389 60.2
Gohir.D10G254600 Gossypium hirsutum HOM05D005798 ORTHO05D007269 8.9e-133 477.6 390 62.3
Nitab4.5_0013532g0010 Nicotiana tabacum HOM05D005798 ORTHO05D007269 1.2e-132 477.2 391 59.6
TWI59G0898 Tripterygium wilfordii HOM05D005798 ORTHO05D007269 1.5e-132 476.9 390 60.3
MD02G1227400 Malus domestica HOM05D005798 ORTHO05D007269 2.6e-132 476.1 389 60.2
Atru.chr5.52 Acer truncatum HOM05D005798 ORTHO05D007269 4.4e-132 475.3 389 60.9
PGSC0003DMG400001703 Solanum tuberosum HOM05D005798 ORTHO05D007269 4.4e-132 475.3 391 61.1
Peaxi162Scf01124g00121 Petunia axillaris HOM05D005798 ORTHO05D007269 5.8e-132 474.9 390 59.0
Atru.chr5.24 Acer truncatum HOM05D005798 ORTHO05D007269 7.6e-132 474.6 389 60.9
CAN.G1480.2 Capsicum annuum HOM05D005798 ORTHO05D007269 7.6e-132 474.6 391 60.4
Solyc01g088390.3 Solanum lycopersicum HOM05D005798 ORTHO05D007269 9.9e-132 474.2 391 59.8
VMungo1080G0989 Vigna mungo HOM05D005798 ORTHO05D007269 1.7e-131 473.4 388 59.5
Phvul.005G016200 Phaseolus vulgaris HOM05D005798 ORTHO05D007269 2.9e-131 472.6 388 59.3
Sopen01g035220 Solanum pennellii HOM05D005798 ORTHO05D007269 3.8e-131 472.2 391 60.1
Migut.B01472 Erythranthe guttata HOM05D005798 ORTHO05D007269 4.9e-131 471.9 393 60.8
Hund17139 Selenicereus undatus HOM05D005798 ORTHO05D007269 6.4e-131 471.5 390 60.3
Glyma.06G310400 Glycine max HOM05D005798 ORTHO05D007269 1.1e-130 470.7 388 59.0
Nitab4.5_0009219g0010 Nicotiana tabacum HOM05D005798 ORTHO05D007269 1.4e-130 470.3 391 59.6
Glyma.04G128400 Glycine max HOM05D005798 ORTHO05D007269 7.1e-130 468.0 388 59.3
PGR004G0434 Punica granatum HOM05D005798 ORTHO05D007269 3.5e-129 465.7 388 58.8
PGR004G1878 Punica granatum HOM05D005798 ORTHO05D007269 6.0e-129 464.9 388 59.0
AUR62027448 Chenopodium quinoa HOM05D005798 ORTHO05D007269 1.0e-128 464.2 391 58.3
Lalb_Chr19g0126311 Lupinus albus HOM05D005798 ORTHO05D007269 1.7e-128 463.4 388 58.5
AUR62031252 Chenopodium quinoa HOM05D005798 ORTHO05D007269 2.3e-128 463.0 391 57.3
arahy.Tifrunner.gnm1.ann1.6FN2NF Arachis hypogaea HOM05D005798 ORTHO05D007269 1.9e-127 459.9 387 56.8
Lj1g0019008 Lotus japonicus HOM05D005798 ORTHO05D007269 1.9e-127 459.9 390 56.4
arahy.Tifrunner.gnm1.ann1.1MA0KJ Arachis hypogaea HOM05D005798 ORTHO05D007269 4.3e-127 458.8 387 56.6
Psat3g172680 Pisum sativum HOM05D005798 ORTHO05D007269 5.6e-127 458.4 391 56.5
ClCG05G002770 Citrullus lanatus HOM05D005798 ORTHO05D007269 4.8e-126 455.3 388 57.7
Medtr0103s0100 Medicago truncatula HOM05D005798 ORTHO05D007269 6.2e-126 454.9 392 56.6
Nn2g10726 Nelumbo nucifera HOM05D005798 ORTHO05D007269 6.2e-126 454.9 397 55.7
MSTRG.20650 Avicennia marina HOM05D005798 ORTHO05D007269 8.1e-126 454.5 391 57.8
MELO3C006251.2 Cucumis melo HOM05D005798 ORTHO05D007269 8.1e-126 454.5 397 57.4
EL10Ac8g19272 Beta vulgaris HOM05D005798 ORTHO05D007269 1.8e-125 453.4 391 57.0
Ca_03850_v3 Cicer arietinum L. HOM05D005798 ORTHO05D007269 3.1e-125 452.6 390 57.2
Oeu024375.1 Olea europaea HOM05D005798 ORTHO05D007269 3.1e-125 452.6 375 58.1
Oeu024376.1 Olea europaea HOM05D005798 ORTHO05D007269 3.1e-125 452.6 375 58.1
CsaV3_3G010280 Cucumis sativus L. HOM05D005798 ORTHO05D007269 1.2e-124 450.7 397 56.7
HanXRQChr16g0519531 Helianthus annuus HOM05D005798 ORTHO05D007269 2.9e-123 446.0 384 58.6
Sc26g0001830 Simmondsia chinensis HOM05D005798 ORTHO05D007269 8.4e-123 444.5 390 55.6
PSO782G4885 Papaver somniferum HOM05D005798 ORTHO05D007269 1.1e-122 444.1 391 57.8
PSO017G1219 Papaver somniferum HOM05D005798 ORTHO05D007269 1.4e-122 443.7 391 57.8
Sed0012756 Sechium edule HOM05D005798 ORTHO05D007269 9.3e-122 441.0 388 56.4
Eucgr.D01150 Eucalyptus grandis HOM05D005798 ORTHO05D007269 2.7e-121 439.5 389 55.3
MBI05_g22048_MAGBIO Magnolia biondii HOM05D005798 ORTHO05D007269 3.5e-121 439.1 388 56.4
PSO063G7295 Papaver somniferum HOM05D005798 ORTHO05D007269 1.0e-120 437.6 401 56.6
Lj7C553T5 Lonicera japonica HOM05D005798 ORTHO05D007269 3.6e-118 429.1 393 56.0
ECA234G4178 Erigeron canadensis HOM05D005798 ORTHO05D007269 3.2e-114 416.0 390 54.6
unitig_52.g17377 Utricularia gibba HOM05D005798 ORTHO05D007269 1.0e-112 411.0 394 52.5
TPR.G30814 Trifolium pratense HOM05D005798 ORTHO05D007269 1.6e-110 403.7 345 58.3
Zm00001eb112030 Zea mays HOM05D005798 ORTHO05D007269 6.9e-109 398.3 394 52.3
Ah.14g086050 Amaranthus hybridus HOM05D005798 ORTHO05D007269 2.0e-108 396.7 384 52.3
SEGI_02869 Sequoiadendron giganteum HOM05D005798 ORTHO05D007269 5.8e-108 395.2 395 49.9
HPP92_011679 Vanilla planifolia HOM05D005798 ORTHO05D007269 1.1e-106 391.0 394 52.3
Os05g0119600 Oryza sativa ssp. japonica HOM05D005798 ORTHO05D007269 4.6e-105 385.6 378 51.3
COL.COLO4_19318 Corchorus olitorius HOM05D005798 ORTHO05D007269 8.7e-104 381.3 313 60.4
Actinidia33294 Actinidia chinensis HOM05D005798 ORTHO05D007269 4.1e-101 372.5 350 55.4
SGA_v2.0_scaffold17G08178 Striga asiatica HOM05D005798 ORTHO05D007269 3.4e-100 369.4 351 53.6
CDE06G2636 Ceratophyllum demersum HOM05D005798 ORTHO05D007269 3.9e-96 355.9 357 51.5
Rhsim01G0145000 Rhododendron simsii HOM05D005798 ORTHO05D007269 6.9e-93 345.1 374 48.1
Nn1g00612 Nelumbo nucifera HOM05D005798 ORTHO05D007269 7.7e-92 341.7 276 59.8
ATR0585G014 Amborella trichopoda HOM05D005798 ORTHO05D007269 1.9e-90 337.0 396 47.0
Cpa.g.sc3387.1 Carica papaya HOM05D005798 ORTHO05D007269 5.7e-87 325.5 239 66.5
Dinv43575 Davidia involucrata HOM05D005798 ORTHO05D007269 1.4e-80 304.3 268 58.2
TAR375G0847 Trochodendron aralioides HOM05D005798 ORTHO05D007269 1.4e-80 304.3 257 58.4
Pp3c5_22720 Physcomitrium patens HOM05D005798 ORTHO05D007269 2.0e-79 300.4 392 40.6
Mapoly0001s0452 Marchantia polymorpha HOM05D005798 ORTHO05D007269 1.2e-73 281.2 398 39.2
AagrBONN_evm.TU.Sc2ySwM_344.2100 Anthoceros agrestis HOM05D005798 ORTHO05D007269 1.1e-69 268.1 383 38.6
GSVIVG01018417001 Vitis vinifera HOM05D005798 ORTHO05D007269 1.6e-65 254.2 191 64.4
Lsat_1_v5_gn_4_46040 Lactuca sativa HOM05D005798 ORTHO05D007269 4.5e-60 236.1 189 62.4
Actinidia21608 Actinidia chinensis HOM05D005798 ORTHO05D007269 2.1e-57 227.3 155 67.1
Nn1g07358 Nelumbo nucifera HOM05D005798 ORTHO05D007269 1.6e-52 211.1 200 56.0
Haze_02923 Corylus avellana HOM05D005798 ORTHO05D007269 2.3e-51 207.2 184 58.2
Nn3g19112 Nelumbo nucifera HOM05D005798 ORTHO05D007269 1.9e-50 204.1 247 44.5
GSVIVG01018418001 Vitis vinifera HOM05D005798 ORTHO05D007269 1.4e-48 198.0 148 64.2
Peaxi162Scf00417g00029 Petunia axillaris HOM05D005798 ORTHO05D007269 1.5e-47 194.5 228 46.1
Prupe.2G112400 Prunus persica HOM05D005798 ORTHO05D007269 9.2e-45 185.3 201 52.7
Nn3g19416 Nelumbo nucifera HOM05D005798 ORTHO05D007269 3.3e-42 176.8 160 55.0
Prupe.2G112500 Prunus persica HOM05D005798 ORTHO05D007269 1.8e-40 171.0 140 59.3
Dinv43574 Davidia involucrata HOM05D005798 ORTHO05D007269 2.2e-38 164.1 110 71.8
CBR_g39622 Chara braunii HOM05D000017 ORTHO05D000013 9.2e-37 158.7 428 27.3
CAN.G195.32 Capsicum annuum HOM05D005798 ORTHO05D007269 5.0e-35 152.9 169 47.3
HanXRQChr12g0366931 Helianthus annuus HOM05D005798 ORTHO05D007269 1.1e-34 151.8 233 37.8
Atru.chr5.133 Acer truncatum HOM05D005798 ORTHO05D007269 1.5e-34 151.4 137 56.9
Cre16.g684155 Chlamydomonas reinhardtii HOM05D005798 ORTHO05D007269 4.3e-34 149.8 367 28.1
Nn1g07357 Nelumbo nucifera HOM05D005798 ORTHO05D007269 2.8e-33 147.1 134 50.7
CAN.G74.39 Capsicum annuum HOM05D005798 ORTHO05D007269 1.1e-32 145.2 138 54.3
Atru.chr5.134 Acer truncatum HOM05D005798 ORTHO05D007269 5.2e-32 142.9 93 71.0
PRCOL_00005399 Prasinoderma coloniale HOM05D005798 ORTHO05D007269 4.9e-30 136.3 370 29.7
Nn3g19415 Nelumbo nucifera HOM05D005798 ORTHO05D007269 1.7e-27 127.9 99 61.6
CAN.G74.38 Capsicum annuum HOM05D005798 ORTHO05D007269 8.6e-27 125.6 93 67.7
MCO12G177 Micromonas commoda HOM05D005798 ORTHO05D007269 2.2e-22 110.9 479 27.1
HanXRQChr07g0198081 Helianthus annuus HOM05D005798 ORTHO05D007269 3.3e-18 97.1 206 31.1
HPP92_011700 Vanilla planifolia HOM05D005798 ORTHO05D007269 3.6e-17 93.6 57 71.9
EL10Ac6g13432 Beta vulgaris HOM05D005798 ORTHO05D007269 4.4e-15 86.7 84 46.4
MBI14_g08084_MAGBIO Magnolia biondii HOM05D005798 ORTHO05D007269 1.0e-11 75.5 85 44.7
TAR375G0441 Trochodendron aralioides HOM05D005798 ORTHO05D007269 5.3e-08 63.2 63 49.2
HanXRQChr11g0349311 Helianthus annuus HOM05D000428 ORTHO05D011602 5.8e-07 59.7 102 37.3
CAN.G195.33 Capsicum annuum HOM05D005798 ORTHO05D007269 1.3e-06 58.5 71 50.7


User provided reference genes

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