Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aa31LG1G20410 Aethionema arabicum HOM05D005475 ORTHO05D006575 2.0e-49 198.7 99 100.0
AL4G29060 Arabidopsis lyrata HOM05D005475 ORTHO05D006575 8.3e-35 150.2 99 74.7
Thhalv10017471m.g Eutrema salsugineum HOM05D005475 ORTHO05D006575 5.4e-34 147.5 99 73.7
AT2G33390 Arabidopsis thaliana HOM05D005475 ORTHO05D006575 1.6e-33 146.0 99 73.7
Carub.0004s1502 Capsella rubella HOM05D005475 ORTHO05D006575 1.3e-32 142.9 100 71.0
Sp4g15710 Schrenkiella parvula HOM05D005475 ORTHO05D006575 6.6e-32 140.6 99 67.7
THA.LOC104816000 Tarenaya hassleriana HOM05D005475 ORTHO05D006575 3.3e-31 138.3 100 68.0
Aa31LG5G3900 Aethionema arabicum HOM05D005475 ORTHO05D006575 4.3e-31 137.9 99 66.7
CARHR127400 Cardamine hirsuta HOM05D005475 ORTHO05D006575 2.8e-30 135.2 91 73.6
BcaB02g10558 Brassica carinata HOM05D005475 ORTHO05D006575 2.6e-28 128.6 102 65.7
COL.COLO4_15946 Corchorus olitorius HOM05D005475 ORTHO05D006575 8.3e-27 123.6 99 56.6
BraA05t20157Z Brassica rapa HOM05D005475 ORTHO05D006575 2.4e-26 122.1 106 63.2
A05p12130 Brassica napus HOM05D005475 ORTHO05D006575 1.2e-25 119.8 105 62.9
TWI73G1305 Tripterygium wilfordii HOM05D005475 ORTHO05D006575 1.3e-24 116.3 99 53.5
C04p15700 Brassica napus HOM05D005475 ORTHO05D006575 1.1e-23 113.2 105 61.0
BolC4t23138H Brassica oleracea HOM05D005475 ORTHO05D006575 1.1e-23 113.2 105 61.0
BcaC02g11426 Brassica carinata HOM05D005475 ORTHO05D006575 4.3e-23 111.3 104 59.6
Gorai.005G053100 Gossypium raimondii HOM05D005475 ORTHO05D006575 5.6e-23 110.9 100 59.0
Gohir.A02G042200 Gossypium hirsutum HOM05D005475 ORTHO05D006575 7.3e-23 110.5 100 58.0
Gohir.D02G047800 Gossypium hirsutum HOM05D005475 ORTHO05D006575 7.3e-23 110.5 100 58.0
Prupe.1G046100 Prunus persica HOM05D005475 ORTHO05D006575 9.5e-23 110.2 88 56.8
Thecc.04G261900 Theobroma cacao HOM05D005475 ORTHO05D006575 2.1e-22 109.0 99 55.6
Glyma.10G136600 Glycine max HOM05D005475 ORTHO05D006575 6.2e-22 107.5 99 55.6
Phvul.007G271300 Phaseolus vulgaris HOM05D005475 ORTHO05D006575 6.2e-22 107.5 100 53.0
Atru.chr4.1933 Acer truncatum HOM05D005475 ORTHO05D006575 1.1e-21 106.7 105 51.4
Duzib212G0290 Durio zibethinus HOM05D005475 ORTHO05D006575 1.1e-21 106.7 99 52.5
MD13G1219400 Malus domestica HOM05D005475 ORTHO05D006575 1.1e-21 106.7 102 52.9
MD16G1224800 Malus domestica HOM05D005475 ORTHO05D006575 1.8e-21 105.9 100 51.0
GSVIVG01027899001 Vitis vinifera HOM05D005475 ORTHO05D006575 2.3e-21 105.5 94 54.3
Potri.010G067200 Populus trichocarpa HOM05D005475 ORTHO05D006575 8.9e-21 103.6 94 55.3
Cfa014769 Carpinus fangiana HOM05D005475 ORTHO05D006575 1.2e-20 103.2 94 50.0
Dinv27096 Davidia involucrata HOM05D005475 ORTHO05D006575 5.8e-20 100.9 88 56.8
CiPaw.02G108100 Carya illinoinensis HOM05D005475 ORTHO05D006575 9.8e-20 100.1 100 52.0
Ca_11926_v3 Cicer arietinum L. HOM05D005475 ORTHO05D006575 2.9e-19 98.6 79 60.8
Psat6g107160 Pisum sativum HOM05D005475 ORTHO05D006575 2.9e-19 98.6 78 57.7
Sed0016324 Sechium edule HOM05D005475 ORTHO05D006575 2.9e-19 98.6 91 52.7
CiPaw.01G179400 Carya illinoinensis HOM05D005475 ORTHO05D006575 6.4e-19 97.4 94 51.1
Sed0012950 Sechium edule HOM05D005475 ORTHO05D006575 1.4e-18 96.3 91 50.5
Hma1.2p1_0385F.1_g141450 Hydrangea macrophylla HOM05D005475 ORTHO05D006575 1.9e-18 95.9 92 54.3
Ciclev10006301m.g Citrus clementina HOM05D005475 ORTHO05D006575 2.4e-18 95.5 99 46.5
QL06p020702 Quercus lobata HOM05D005475 ORTHO05D006575 2.4e-18 95.5 99 51.5
Lalb_Chr19g0128471 Lupinus albus HOM05D005475 ORTHO05D006575 3.2e-18 95.1 94 51.1
Sabra08G0130500 Salix brachista HOM05D005475 ORTHO05D006575 3.2e-18 95.1 93 53.8
Potri.008G170700 Populus trichocarpa HOM05D005475 ORTHO05D006575 4.1e-18 94.7 95 52.6
CANSAT78G0624 Cannabis sativa HOM05D005475 ORTHO05D006575 5.4e-18 94.4 91 49.5
RcHm_v2.0_Chr4g0394791 Rosa chinensis HOM05D005475 ORTHO05D006575 5.4e-18 94.4 61 70.5
Nn3g19747 Nelumbo nucifera HOM05D005475 ORTHO05D006575 7.0e-18 94.0 93 48.4
ClCG05G004080 Citrullus lanatus HOM05D005475 ORTHO05D006575 1.2e-17 93.2 88 51.1
TAR362G0816 Trochodendron aralioides HOM05D005475 ORTHO05D006575 1.2e-17 93.2 91 50.5
FAN17G2060 Fragaria x ananassa HOM05D005475 ORTHO05D006575 2.0e-17 92.4 91 53.8
BcaC02g07831 Brassica carinata HOM05D005475 ORTHO05D006575 2.7e-17 92.0 103 49.5
C04p62850 Brassica napus HOM05D005475 ORTHO05D006575 2.7e-17 92.0 103 49.5
BolC4t27768H Brassica oleracea HOM05D005475 ORTHO05D006575 2.7e-17 92.0 103 49.5
A03p18710 Brassica napus HOM05D005475 ORTHO05D006575 3.9e-16 88.2 99 46.5
Eucgr.H02964 Eucalyptus grandis HOM05D005475 ORTHO05D006575 3.9e-16 88.2 94 50.0
Glyma.20G201100 Glycine max HOM05D005475 ORTHO05D006575 6.6e-16 87.4 103 49.5
Solyc09g090540.3 Solanum lycopersicum HOM05D005475 ORTHO05D006575 1.1e-15 86.7 67 59.7
Actinidia11364 Actinidia chinensis HOM05D005475 ORTHO05D006575 1.9e-15 85.9 88 46.6
BcaB06g28682 Brassica carinata HOM05D005475 ORTHO05D006575 1.9e-15 85.9 104 46.2
CAN.G220.90 Capsicum annuum HOM05D005475 ORTHO05D006575 1.9e-15 85.9 92 47.8
Nitab4.5_0002709g0070 Nicotiana tabacum HOM05D005475 ORTHO05D006575 2.5e-15 85.5 91 49.5
Manes.15G044300 Manihot esculenta HOM05D005475 ORTHO05D006575 3.3e-15 85.1 74 56.8
Medtr1g045370 Medicago truncatula HOM05D005475 ORTHO05D006575 4.3e-15 84.7 80 53.8
A04p25690 Brassica napus HOM05D005475 ORTHO05D006575 5.6e-15 84.3 54 70.4
C03p21860 Brassica napus HOM05D005475 ORTHO05D006575 5.6e-15 84.3 100 48.0
BolC3t14568H Brassica oleracea HOM05D005475 ORTHO05D006575 5.6e-15 84.3 100 48.0
BraA04t18073Z Brassica rapa HOM05D005475 ORTHO05D006575 5.6e-15 84.3 54 70.4
BcaC07g37337 Brassica carinata HOM05D005475 ORTHO05D006575 7.3e-15 84.0 74 63.5
C08p07780 Brassica napus HOM05D005475 ORTHO05D006575 7.3e-15 84.0 74 63.5
BolC8t47626H Brassica oleracea HOM05D005475 ORTHO05D006575 7.3e-15 84.0 74 63.5
BraA03t11131Z Brassica rapa HOM05D005475 ORTHO05D006575 7.3e-15 84.0 99 45.5
Glyma.10G189800 Glycine max HOM05D005475 ORTHO05D006575 7.3e-15 84.0 103 49.5
Peaxi162Scf00033g02837 Petunia axillaris HOM05D005475 ORTHO05D006575 7.3e-15 84.0 69 55.1
CSS0013344 Camellia sinensis var. sinensis HOM05D005475 ORTHO05D006575 9.5e-15 83.6 98 41.8
Manes.03G160400 Manihot esculenta HOM05D005475 ORTHO05D006575 9.5e-15 83.6 94 47.9
Phvul.L002444 Phaseolus vulgaris HOM05D005475 ORTHO05D006575 9.5e-15 83.6 103 48.5
Nitab4.5_0001051g0090 Nicotiana tabacum HOM05D005475 ORTHO05D006575 1.2e-14 83.2 91 48.4
BcaC01g05844 Brassica carinata HOM05D005475 ORTHO05D006575 2.1e-14 82.4 99 46.5
Gohir.D10G159400 Gossypium hirsutum HOM05D005475 ORTHO05D006575 2.1e-14 82.4 101 44.6
Gorai.011G179000 Gossypium raimondii HOM05D005475 ORTHO05D006575 2.1e-14 82.4 101 44.6
Hma1.2p1_0112F.1_g054570 Hydrangea macrophylla HOM05D005475 ORTHO05D006575 2.1e-14 82.4 86 47.7
Gohir.A10G108400 Gossypium hirsutum HOM05D005475 ORTHO05D006575 2.8e-14 82.0 101 44.6
Psat6g117200 Pisum sativum HOM05D005475 ORTHO05D006575 2.8e-14 82.0 96 51.0
VMungo0720G1758 Vigna mungo HOM05D005475 ORTHO05D006575 3.6e-14 81.6 103 48.5
MELO3C006388.2 Cucumis melo HOM05D000730 ORTHO05D000578 4.7e-14 81.3 116 39.7
vmacro08540 Vaccinium macrocarpon HOM05D005475 ORTHO05D006575 6.2e-14 80.9 97 43.3
Glyma.20G086200 Glycine max HOM05D005475 ORTHO05D006575 8.1e-14 80.5 79 53.2
Duzib151G0481 Durio zibethinus HOM05D005475 ORTHO05D006575 1.8e-13 79.3 79 48.1
SalBow3G2868 Salvia bowleyana HOM05D005475 ORTHO05D006575 2.3e-13 79.0 65 52.3
Hund03078 Selenicereus undatus HOM05D005475 ORTHO05D006575 3.1e-13 78.6 69 49.3
Cc03_g06010 Coffea canephora HOM05D005475 ORTHO05D006575 4.0e-13 78.2 92 42.4
FAN12G1687 Fragaria x ananassa HOM05D005475 ORTHO05D006575 6.8e-13 77.4 88 48.9
TPR.G28846 Trifolium pratense HOM05D005475 ORTHO05D006575 8.9e-13 77.0 91 48.4
MBI07_g18714_MAGBIO Magnolia biondii HOM05D005475 ORTHO05D006575 1.2e-12 76.6 84 48.8
PSO674G0109 Papaver somniferum HOM05D005475 ORTHO05D006575 1.2e-12 76.6 86 48.8
Actinidia20831 Actinidia chinensis HOM05D005475 ORTHO05D006575 1.5e-12 76.3 85 40.0
Lj6g0010293 Lotus japonicus HOM05D005475 ORTHO05D006575 1.5e-12 76.3 67 59.7
ECA248G3571 Erigeron canadensis HOM05D000730 ORTHO05D000578 2.0e-12 75.9 72 50.0
Lsat_1_v5_gn_1_75221 Lactuca sativa HOM05D005475 ORTHO05D006575 2.0e-12 75.9 71 52.1
Lj5g0027748 Lotus japonicus HOM05D005475 ORTHO05D006575 2.0e-12 75.9 98 48.0
PSO832G2786 Papaver somniferum HOM05D005475 ORTHO05D006575 2.0e-12 75.9 86 48.8
Sopen09g033470 Solanum pennellii HOM05D005475 ORTHO05D006575 2.6e-12 75.5 67 55.2
PGSC0003DMG400017155 Solanum tuberosum HOM05D005475 ORTHO05D006575 2.6e-12 75.5 67 55.2
Actinidia39922 Actinidia chinensis HOM05D005475 ORTHO05D006575 3.4e-12 75.1 88 43.2
CDE08G0603 Ceratophyllum demersum HOM05D005475 ORTHO05D006575 3.4e-12 75.1 89 46.1
Aqoxy2G03723 Aquilegia oxysepala HOM05D005475 ORTHO05D006575 4.4e-12 74.7 88 46.6
CsaV3_3G011800 Cucumis sativus L. HOM05D005475 ORTHO05D006575 4.4e-12 74.7 71 50.7
Medtr1g073660 Medicago truncatula HOM05D005475 ORTHO05D006575 4.4e-12 74.7 105 43.8
Rhsim02G0042800 Rhododendron simsii HOM05D005475 ORTHO05D006575 7.5e-12 73.9 83 43.4
TPR.G27310 Trifolium pratense HOM05D005475 ORTHO05D006575 1.3e-11 73.2 58 58.6
Lalb_Chr03g0037011 Lupinus albus HOM05D005475 ORTHO05D006575 2.2e-11 72.4 103 40.8
Sabra10G0040200 Salix brachista HOM05D005475 ORTHO05D006575 3.7e-11 71.6 74 51.4
Lalb_Chr06g0169471 Lupinus albus HOM05D005475 ORTHO05D006575 8.3e-11 70.5 81 50.6
PGR031G0084 Punica granatum HOM05D005475 ORTHO05D006575 8.3e-11 70.5 86 46.5
FvH4_4g04340 Fragaria vesca HOM05D005475 ORTHO05D006575 1.4e-10 69.7 79 50.6
Migut.N00292 Erythranthe guttata HOM05D005475 ORTHO05D006575 1.9e-10 69.3 74 45.9
FAN22G1457 Fragaria x ananassa HOM05D005475 ORTHO05D006575 3.2e-10 68.6 71 53.5
RcHm_v2.0_Chr4g0394821 Rosa chinensis HOM05D005475 ORTHO05D006575 3.2e-10 68.6 41 78.0
FAN22G0728 Fragaria x ananassa HOM05D005475 ORTHO05D006575 4.1e-10 68.2 78 50.0
Sed0016405 Sechium edule HOM05D005475 ORTHO05D006575 4.1e-10 68.2 88 40.9
MBI10_g38466_MAGBIO Magnolia biondii HOM05D005475 ORTHO05D006575 5.4e-10 67.8 100 43.0
vmacro15470 Vaccinium macrocarpon HOM05D005475 ORTHO05D006575 9.2e-10 67.0 74 45.9
Sc13g0006140 Simmondsia chinensis HOM05D005475 ORTHO05D006575 6.0e-09 64.3 64 51.6
Rhsim04G0173600 Rhododendron simsii HOM05D005475 ORTHO05D006575 7.8e-09 63.9 129 33.3
CSS0022443 Camellia sinensis var. sinensis HOM05D005475 ORTHO05D006575 1.0e-08 63.5 72 41.7
TAR365G0748 Trochodendron aralioides HOM05D005475 ORTHO05D006575 2.3e-08 62.4 90 38.9
Nn1g02914 Nelumbo nucifera HOM05D005475 ORTHO05D006575 3.9e-08 61.6 94 38.3
Lalb_Chr02g0150621 Lupinus albus HOM05D005475 ORTHO05D006575 6.6e-08 60.8 54 57.4
HanXRQChr01g0022901 Helianthus annuus HOM05D005475 ORTHO05D006575 5.6e-07 57.8 41 63.4


User provided reference genes

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