Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aa31LG1G19710 Aethionema arabicum HOM05D002897 ORTHO05D008718 6.3e-163 577.4 299 100.0
AT1G05060 Arabidopsis thaliana HOM05D002897 ORTHO05D008718 2.0e-100 369.8 302 68.2
Thhalv10008572m.g Eutrema salsugineum HOM05D002897 ORTHO05D008718 1.4e-98 363.6 299 65.2
AL1G14810 Arabidopsis lyrata HOM05D002897 ORTHO05D008718 1.2e-97 360.5 302 66.6
Carub.0001s0433 Capsella rubella HOM05D002897 ORTHO05D008718 1.6e-97 360.1 300 65.7
Sp1g03930 Schrenkiella parvula HOM05D002897 ORTHO05D008718 2.7e-97 359.4 299 64.5
CARHR004510 Cardamine hirsuta HOM05D002897 ORTHO05D008718 4.6e-97 358.6 302 68.2
BraA09t38920Z Brassica rapa HOM05D002897 ORTHO05D008718 5.5e-90 335.1 299 61.2
BcaC05g27288 Brassica carinata HOM05D002897 ORTHO05D008718 3.0e-88 329.3 301 60.5
BolC5t31920H Brassica oleracea HOM05D002897 ORTHO05D008718 2.5e-87 326.2 301 59.8
BcaB07g32946 Brassica carinata HOM05D002897 ORTHO05D008718 8.2e-86 321.2 300 60.0
A09p33710 Brassica napus HOM05D002897 ORTHO05D008718 8.2e-86 321.2 324 56.5
C05p31940 Brassica napus HOM05D002897 ORTHO05D008718 1.3e-83 313.9 326 55.8
THA.LOC104826141 Tarenaya hassleriana HOM05D002897 ORTHO05D008718 2.9e-83 312.8 299 55.9
Thecc.01G180000 Theobroma cacao HOM05D002897 ORTHO05D008718 8.0e-73 278.1 299 51.8
Duzib138G1172 Durio zibethinus HOM05D002897 ORTHO05D008718 1.4e-72 277.3 296 51.7
Potri.014G156700 Populus trichocarpa HOM05D002897 ORTHO05D008718 6.7e-72 275.0 303 51.5
Manes.13G067750 Manihot esculenta HOM05D002897 ORTHO05D008718 9.7e-71 271.2 300 50.7
TWI18G1283 Tripterygium wilfordii HOM05D002897 ORTHO05D008718 2.2e-70 270.0 303 49.2
Manes.13G067751 Manihot esculenta HOM05D002897 ORTHO05D008718 3.7e-70 269.2 300 50.3
Ciclev10016301m.g Citrus clementina HOM05D002897 ORTHO05D008718 6.3e-70 268.5 309 49.2
Cpa.g.sc132.3 Carica papaya HOM05D002897 ORTHO05D008718 3.1e-69 266.2 301 49.5
Sabra14G0118500 Salix brachista HOM05D002897 ORTHO05D008718 4.5e-68 262.3 302 49.7
Atru.chr6.3235 Acer truncatum HOM05D002897 ORTHO05D008718 7.7e-68 261.5 305 49.8
TAR624G0001 Trochodendron aralioides HOM05D002897 ORTHO05D008718 3.8e-67 259.2 307 49.2
Gorai.007G171100 Gossypium raimondii HOM05D002897 ORTHO05D008718 4.2e-66 255.8 299 48.2
Nn1g07262 Nelumbo nucifera HOM05D002897 ORTHO05D008718 4.2e-66 255.8 307 48.2
Cfa014332 Carpinus fangiana HOM05D002897 ORTHO05D008718 7.2e-66 255.0 302 48.0
Gohir.D11G160500 Gossypium hirsutum HOM05D002897 ORTHO05D008718 7.2e-66 255.0 299 48.2
Rhsim06G0166000 Rhododendron simsii HOM05D002897 ORTHO05D008718 1.4e-64 250.8 299 49.8
GSVIVG01030483001 Vitis vinifera HOM05D002897 ORTHO05D008718 1.2e-63 247.7 302 48.0
Gohir.A11G153700 Gossypium hirsutum HOM05D002897 ORTHO05D008718 2.0e-63 246.9 299 46.8
Solyc07g049200.4 Solanum lycopersicum HOM05D002897 ORTHO05D008718 4.4e-63 245.7 304 46.4
CiPaw.03G157200 Carya illinoinensis HOM05D002897 ORTHO05D008718 5.7e-63 245.4 303 46.2
RcHm_v2.0_Chr2g0158471 Rosa chinensis HOM05D002897 ORTHO05D008718 1.7e-62 243.8 299 47.5
Sopen07g025210 Solanum pennellii HOM05D002897 ORTHO05D008718 6.3e-62 241.9 299 45.5
Prupe.3G212700 Prunus persica HOM05D002897 ORTHO05D008718 1.1e-61 241.1 304 45.1
Haze_12787 Corylus avellana HOM05D002897 ORTHO05D008718 3.1e-61 239.6 322 44.7
Glyma.14G046500 Glycine max HOM05D002897 ORTHO05D008718 3.1e-61 239.6 297 46.1
arahy.Tifrunner.gnm1.ann1.QRVI7E Arachis hypogaea HOM05D002897 ORTHO05D008718 4.1e-61 239.2 315 43.8
AUR62035641 Chenopodium quinoa HOM05D002897 ORTHO05D008718 5.3e-61 238.8 300 46.3
FAN02G2770 Fragaria x ananassa HOM05D002897 ORTHO05D008718 5.3e-61 238.8 301 46.5
FAN05G4893 Fragaria x ananassa HOM05D002897 ORTHO05D008718 5.3e-61 238.8 301 46.5
ClCG02G002140 Citrullus lanatus HOM05D002897 ORTHO05D008718 9.1e-61 238.0 304 45.4
Actinidia09731 Actinidia chinensis HOM05D002897 ORTHO05D008718 1.2e-60 237.7 301 46.8
Sed0013072 Sechium edule HOM05D002897 ORTHO05D008718 1.2e-60 237.7 299 46.2
PGSC0003DMG400000696 Solanum tuberosum HOM05D002897 ORTHO05D008718 1.6e-60 237.3 304 45.1
arahy.Tifrunner.gnm1.ann1.YEZ88R Arachis hypogaea HOM05D002897 ORTHO05D008718 2.0e-60 236.9 315 43.5
Sc06g0009610 Simmondsia chinensis HOM05D002897 ORTHO05D008718 2.0e-60 236.9 305 45.6
vmacro12177 Vaccinium macrocarpon HOM05D002897 ORTHO05D008718 2.0e-60 236.9 299 47.2
Nitab4.5_0000482g0070 Nicotiana tabacum HOM05D002897 ORTHO05D008718 2.7e-60 236.5 305 45.6
VMungo0647G1784 Vigna mungo HOM05D002897 ORTHO05D008718 2.7e-60 236.5 298 45.3
MELO3C018838.2 Cucumis melo HOM05D002897 ORTHO05D008718 3.5e-60 236.1 305 46.2
Hma1.2p1_2044F.1_g312350 Hydrangea macrophylla HOM05D002897 ORTHO05D008718 5.9e-60 235.3 305 46.2
FvH4_6g42620 Fragaria vesca HOM05D002897 ORTHO05D008718 7.7e-60 235.0 301 45.5
Phvul.008G211400 Phaseolus vulgaris HOM05D002897 ORTHO05D008718 7.7e-60 235.0 301 45.2
QL08p031170 Quercus lobata HOM05D002897 ORTHO05D008718 7.7e-60 235.0 303 44.9
CsaV3_7G003360 Cucumis sativus L. HOM05D002897 ORTHO05D008718 1.3e-59 234.2 305 46.2
Glyma.02G270500 Glycine max HOM05D002897 ORTHO05D008718 1.3e-59 234.2 299 45.8
Aqoxy1G03476 Aquilegia oxysepala HOM05D002897 ORTHO05D008718 1.7e-59 233.8 308 48.4
CSS0022002 Camellia sinensis var. sinensis HOM05D002897 ORTHO05D008718 1.7e-59 233.8 302 45.7
Peaxi162Scf00921g00023 Petunia axillaris HOM05D002897 ORTHO05D008718 2.2e-59 233.4 303 44.9
AUR62017163 Chenopodium quinoa HOM05D002897 ORTHO05D008718 5.0e-59 232.3 293 46.4
Eucgr.A01101 Eucalyptus grandis HOM05D002897 ORTHO05D008718 3.2e-58 229.6 312 42.9
Nitab4.5_0012091g0010 Nicotiana tabacum HOM05D002897 ORTHO05D008718 4.2e-58 229.2 301 44.9
TPR.G14446 Trifolium pratense HOM05D002897 ORTHO05D008718 9.4e-58 228.0 300 44.0
Dinv39736 Davidia involucrata HOM05D002897 ORTHO05D008718 2.1e-57 226.9 305 45.9
MSTRG.14141 Avicennia marina HOM05D002897 ORTHO05D008718 2.7e-57 226.5 303 43.9
LjContig00564g0002899 Lotus japonicus HOM05D002897 ORTHO05D008718 1.0e-56 224.6 303 44.9
EL10Ac4g07512 Beta vulgaris HOM05D002897 ORTHO05D008718 2.3e-56 223.4 313 44.1
SalBow1G3579 Salvia bowleyana HOM05D002897 ORTHO05D008718 4.0e-56 222.6 316 44.0
ECA234G1553 Erigeron canadensis HOM05D002897 ORTHO05D008718 6.8e-56 221.9 303 44.6
SalBow1G2496 Salvia bowleyana HOM05D002897 ORTHO05D008718 8.8e-56 221.5 309 44.0
Lsat_1_v5_gn_5_123640 Lactuca sativa HOM05D002897 ORTHO05D008718 1.5e-55 220.7 304 44.4
Psat4g114440 Pisum sativum HOM05D002897 ORTHO05D008718 1.5e-55 220.7 298 42.6
Lalb_Chr04g0249891 Lupinus albus HOM05D002897 ORTHO05D008718 2.6e-55 219.9 302 43.0
Medtr5g085980 Medicago truncatula HOM05D002897 ORTHO05D008718 2.6e-55 219.9 297 41.8
Cc05_g03270 Coffea canephora HOM05D002897 ORTHO05D008718 4.4e-55 219.2 301 43.5
HanXRQChr12g0373611 Helianthus annuus HOM05D002897 ORTHO05D008718 4.4e-55 219.2 304 44.4
Migut.H01234 Erythranthe guttata HOM05D002897 ORTHO05D008718 5.7e-55 218.8 314 43.0
Ca_06120_v3 Cicer arietinum L. HOM05D002897 ORTHO05D008718 7.5e-55 218.4 303 43.2
Lj8C128G4 Lonicera japonica HOM05D002897 ORTHO05D008718 7.5e-55 218.4 301 46.2
Oeu051891.2 Olea europaea HOM05D002897 ORTHO05D008718 9.8e-55 218.0 331 41.1
SGA_v2.0_scaffold49G18345 Striga asiatica HOM05D002897 ORTHO05D008718 2.8e-54 216.5 307 41.4
Hma1.2p1_1986F.1_g310090 Hydrangea macrophylla HOM05D002897 ORTHO05D008718 1.0e-51 208.0 245 47.3
MBI19_g24999_MAGBIO Magnolia biondii HOM05D002897 ORTHO05D008718 1.1e-50 204.5 309 41.7
CDE07G0516 Ceratophyllum demersum HOM05D002897 ORTHO05D008718 9.5e-50 201.4 303 41.9
Aqoxy1G03469 Aquilegia oxysepala HOM05D002897 ORTHO05D008718 1.6e-49 200.7 307 40.7
Zm00001eb280010 Zea mays HOM05D002897 ORTHO05D008718 2.0e-47 193.7 299 40.1
MD17G1102200 Malus domestica HOM05D002897 ORTHO05D008718 1.1e-45 188.0 263 43.7
Os06g0239700 Oryza sativa ssp. japonica HOM05D002897 ORTHO05D008718 3.1e-45 186.4 298 37.6
COL.COLO4_21853 Corchorus olitorius HOM05D002897 ORTHO05D008718 4.1e-45 186.0 157 61.1
PSO210G2604 Papaver somniferum HOM05D002897 ORTHO05D008718 5.9e-44 182.2 303 38.3
Hma1.2p1_2044F.1_g312360 Hydrangea macrophylla HOM05D002897 ORTHO05D008718 1.2e-39 167.9 242 44.6
DCAR_012931 Daucus carota HOM05D002897 ORTHO05D008718 4.1e-37 159.5 306 37.9
FAN14G2576 Fragaria x ananassa HOM05D002897 ORTHO05D008718 5.4e-37 159.1 301 37.2
HPP92_017354 Vanilla planifolia HOM05D002897 ORTHO05D008718 1.5e-34 151.0 295 34.2
unitig_21.g21003 Utricularia gibba HOM05D002897 ORTHO05D008718 1.2e-31 141.4 203 38.4
CSS0034853 Camellia sinensis var. sinensis HOM05D002897 ORTHO05D008718 3.5e-28 129.8 201 40.8
SEGI_41028 Sequoiadendron giganteum HOM05D002897 ORTHO05D008718 6.6e-27 125.6 288 32.3
ATR0059G011 Amborella trichopoda HOM05D002897 ORTHO05D008718 1.3e-22 111.3 137 48.9
Aa31sc72G10 Aethionema arabicum HOM05D002897 ORTHO05D008718 6.6e-19 99.0 95 62.1
MD06G1049400 Malus domestica HOM05D002897 ORTHO05D008718 1.1e-18 98.2 132 48.5
Pp3c23_20260 Physcomitrium patens HOM05D002897 ORTHO05D008718 3.1e-16 90.1 294 28.9
AagrBONN_evm.TU.Sc2ySwM_117.2821 Anthoceros agrestis HOM05D002897 ORTHO05D008718 8.4e-14 82.0 274 25.5
ATR0059G040 Amborella trichopoda HOM05D002897 ORTHO05D008718 1.1e-13 81.6 93 47.3
CANSAT64G1786 Cannabis sativa HOM05D002897 ORTHO05D008718 1.5e-10 71.2 57 56.1
BolC6t39233H Brassica oleracea HOM05D002897 ORTHO05D008718 2.6e-07 60.5 44 63.6


User provided reference genes

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