Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aa31LG1G12070 Aethionema arabicum HOM05D000125 ORTHO05D000120 1.7e-51 205.7 99 100.0
Aa31LG1G12050 Aethionema arabicum HOM05D000125 ORTHO05D000120 2.4e-18 95.5 41 100.0
Aa31sc1332G10 Aethionema arabicum HOM05D000125 ORTHO05D000120 1.2e-17 93.2 51 78.4
Aa31sc23G30 Aethionema arabicum HOM05D000125 ORTHO05D000120 1.5e-15 86.3 40 92.5
Aa31LG8G10680 Aethionema arabicum HOM05D000125 ORTHO05D000120 2.8e-14 82.0 47 70.2
AT5G59940 Arabidopsis thaliana HOM05D000125 ORTHO05D000120 7.1e-10 67.4 46 69.6
Carub.0008s2051 Capsella rubella HOM05D000125 ORTHO05D000120 1.2e-09 66.6 56 57.1
AL8G36490 Arabidopsis lyrata HOM05D000125 ORTHO05D000120 1.6e-09 66.2 51 60.8
BolC3t16366H Brassica oleracea HOM05D000125 ORTHO05D000120 6.0e-09 64.3 51 60.8
Aa31LG1G12060 Aethionema arabicum HOM05D000125 ORTHO05D000120 1.3e-08 63.2 37 73.0
BcaB04g19314 Brassica carinata HOM05D000125 ORTHO05D000120 1.3e-08 63.2 68 50.0
Carub.0002s1198 Capsella rubella HOM05D000125 ORTHO05D000120 4.3e-07 58.2 54 51.9
A01p40800 Brassica napus HOM05D000125 ORTHO05D000120 7.3e-07 57.4 50 50.0
BNapus_Darmor_BZH_scaffold_78p00910 Brassica napus HOM05D000125 ORTHO05D000120 7.3e-07 57.4 50 50.0
BolC1t05737H Brassica oleracea HOM05D000125 ORTHO05D000120 1.6e-06 56.2 50 50.0
AT4G01350 Arabidopsis thaliana HOM05D000125 ORTHO05D000120 2.8e-06 55.5 51 52.9
C03p40870 Brassica napus HOM05D000125 ORTHO05D000120 2.8e-06 55.5 43 65.1
C03p40980 Brassica napus HOM05D000125 ORTHO05D000120 2.8e-06 55.5 63 52.4
BolC3t13779H Brassica oleracea HOM05D000125 ORTHO05D000120 2.8e-06 55.5 48 54.2
C03p13140 Brassica napus HOM05D000125 ORTHO05D000120 4.7e-06 54.7 43 58.1
Carub.0002s1199 Capsella rubella HOM05D000125 ORTHO05D000120 4.7e-06 54.7 57 49.1
AT5G59930 Arabidopsis thaliana HOM05D000125 ORTHO05D000120 6.2e-06 54.3 43 60.5
C03p40900 Brassica napus HOM05D000125 ORTHO05D000120 6.2e-06 54.3 43 58.1
C03p41000 Brassica napus HOM05D000125 ORTHO05D000120 6.2e-06 54.3 43 58.1
BcaB01g02039 Brassica carinata HOM05D000125 ORTHO05D000120 8.1e-06 53.9 45 51.1
BcaNung05004 Brassica carinata HOM05D000125 ORTHO05D000120 8.1e-06 53.9 45 51.1
C03p40930 Brassica napus HOM05D000125 ORTHO05D000120 8.1e-06 53.9 43 58.1
BolC3t16361H Brassica oleracea HOM05D000125 ORTHO05D000120 8.1e-06 53.9 60 48.3


User provided reference genes

Program Settings