Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aa31LG1G11510 Aethionema arabicum HOM05D006055 ORTHO05D007480 1.3e-171 606.3 306 100.0
Sp1g00170 Schrenkiella parvula HOM05D006055 ORTHO05D007480 1.0e-147 526.9 288 90.3
CARHR000230 Cardamine hirsuta HOM05D006055 ORTHO05D007480 1.9e-146 522.7 288 90.6
Thhalv10008126m.g Eutrema salsugineum HOM05D006055 ORTHO05D007480 6.1e-145 517.7 288 89.6
A09p69350 Brassica napus HOM05D006055 ORTHO05D007480 5.2e-144 514.6 284 90.8
BolC8t52925H Brassica oleracea HOM05D006055 ORTHO05D007480 5.2e-144 514.6 284 90.8
BcaC07g42437 Brassica carinata HOM05D006055 ORTHO05D007480 7.5e-143 510.8 284 90.5
Carub.0001s0012 Capsella rubella HOM05D006055 ORTHO05D007480 7.5e-143 510.8 283 90.5
AL1G10130 Arabidopsis lyrata HOM05D006055 ORTHO05D007480 1.1e-141 506.9 283 89.8
AT1G02100 Arabidopsis thaliana HOM05D006055 ORTHO05D007480 1.2e-140 503.4 283 90.1
BcaC07g42339 Brassica carinata HOM05D006055 ORTHO05D007480 1.2e-140 503.4 283 89.4
BraA09t42280Z Brassica rapa HOM05D006055 ORTHO05D007480 3.5e-140 501.9 284 90.1
Manes.05G054600 Manihot esculenta HOM05D006055 ORTHO05D007480 1.9e-130 469.5 288 79.9
Gohir.A08G029400 Gossypium hirsutum HOM05D006055 ORTHO05D007480 7.2e-130 467.6 288 81.2
Duzib138G0472 Durio zibethinus HOM05D006055 ORTHO05D007480 9.5e-130 467.2 288 80.6
GSVIVG01018274001 Vitis vinifera HOM05D006055 ORTHO05D007480 2.8e-129 465.7 283 81.6
COL.COLO4_12412 Corchorus olitorius HOM05D006055 ORTHO05D007480 3.6e-129 465.3 288 81.2
Thecc.01G394500 Theobroma cacao HOM05D006055 ORTHO05D007480 4.7e-129 464.9 288 80.6
Dinv43619 Davidia involucrata HOM05D006055 ORTHO05D007480 2.3e-128 462.6 288 79.2
CANSAT21G1800 Cannabis sativa HOM05D006055 ORTHO05D007480 1.7e-126 456.4 283 78.4
TWI14G0600 Tripterygium wilfordii HOM05D006055 ORTHO05D007480 3.7e-126 455.3 283 79.5
CANSAT21G1956 Cannabis sativa HOM05D006055 ORTHO05D007480 1.8e-125 453.0 283 78.1
PGR004G2446 Punica granatum HOM05D006055 ORTHO05D007480 1.8e-125 453.0 288 78.5
PGR144G0002 Punica granatum HOM05D006055 ORTHO05D007480 1.8e-125 453.0 288 78.5
TAR375G0976 Trochodendron aralioides HOM05D006055 ORTHO05D007480 2.4e-125 452.6 288 77.8
CSS0024076 Camellia sinensis var. sinensis HOM05D006055 ORTHO05D007480 3.1e-125 452.2 288 77.8
Atru.chr5.130 Acer truncatum HOM05D006055 ORTHO05D007480 9.2e-125 450.7 287 79.1
Cfa011074 Carpinus fangiana HOM05D006055 ORTHO05D007480 1.2e-124 450.3 283 77.4
Ciclev10021096m.g Citrus clementina HOM05D006055 ORTHO05D007480 1.2e-124 450.3 288 77.8
Actinidia12146 Actinidia chinensis HOM05D006055 ORTHO05D007480 1.6e-124 449.9 288 77.4
FAN06G3912 Fragaria x ananassa HOM05D006055 ORTHO05D007480 1.6e-124 449.9 288 77.8
Gohir.D08G040100 Gossypium hirsutum HOM05D006055 ORTHO05D007480 1.6e-124 449.9 329 71.4
MD07G1108400 Malus domestica HOM05D006055 ORTHO05D007480 1.6e-124 449.9 282 78.7
FvH4_7g10160 Fragaria vesca HOM05D006055 ORTHO05D007480 2.0e-124 449.5 288 77.8
Gorai.004G039000 Gossypium raimondii HOM05D006055 ORTHO05D007480 2.0e-124 449.5 330 71.2
vmacro13494 Vaccinium macrocarpon HOM05D006055 ORTHO05D007480 2.0e-124 449.5 288 77.1
FAN06G2084 Fragaria x ananassa HOM05D006055 ORTHO05D007480 4.5e-124 448.4 288 77.8
Oeu011253.1 Olea europaea HOM05D006055 ORTHO05D007480 1.0e-123 447.2 283 79.2
Potri.014G047300 Populus trichocarpa HOM05D006055 ORTHO05D007480 1.0e-123 447.2 289 78.5
Cc02_g25090 Coffea canephora HOM05D006055 ORTHO05D007480 1.3e-123 446.8 282 78.7
Rhsim07G0035700 Rhododendron simsii HOM05D006055 ORTHO05D007480 1.7e-123 446.4 297 75.4
Sabra14G0034300 Salix brachista HOM05D006055 ORTHO05D007480 1.7e-123 446.4 289 77.9
Sed0027680 Sechium edule HOM05D006055 ORTHO05D007480 1.7e-123 446.4 288 77.4
Cpa.g.sc101.4 Carica papaya HOM05D006055 ORTHO05D007480 2.3e-123 446.0 288 78.8
CiPaw.13G026500 Carya illinoinensis HOM05D006055 ORTHO05D007480 2.3e-123 446.0 288 76.0
QL04p030364 Quercus lobata HOM05D006055 ORTHO05D007480 2.3e-123 446.0 283 76.3
Eucgr.D01230 Eucalyptus grandis HOM05D006055 ORTHO05D007480 3.8e-123 445.3 283 77.7
FAN01G2488 Fragaria x ananassa HOM05D006055 ORTHO05D007480 6.6e-123 444.5 288 77.1
Lj1g0005705 Lotus japonicus HOM05D006055 ORTHO05D007480 1.1e-122 443.7 290 75.9
Hma1.2p1_0009F.1_g005960 Hydrangea macrophylla HOM05D006055 ORTHO05D007480 1.9e-122 443.0 288 75.3
FAN10G0847 Fragaria x ananassa HOM05D006055 ORTHO05D007480 2.5e-122 442.6 288 76.7
Migut.N01738 Erythranthe guttata HOM05D006055 ORTHO05D007480 3.3e-122 442.2 288 76.7
SGA_v2.0_scaffold43G16538 Striga asiatica HOM05D006055 ORTHO05D007480 5.6e-122 441.4 288 77.1
Peaxi162Scf00475g00522 Petunia axillaris HOM05D006055 ORTHO05D007480 7.3e-122 441.0 282 77.7
Prupe.2G131200 Prunus persica HOM05D006055 ORTHO05D007480 7.3e-122 441.0 288 76.0
FAN03G3321 Fragaria x ananassa HOM05D006055 ORTHO05D007480 9.5e-122 440.7 288 76.0
MSTRG.28152 Avicennia marina HOM05D006055 ORTHO05D007480 1.2e-121 440.3 288 77.8
MELO3C022277.2 Cucumis melo HOM05D006055 ORTHO05D007480 1.2e-121 440.3 288 75.3
RcHm_v2.0_Chr1g0347871 Rosa chinensis HOM05D006055 ORTHO05D007480 2.1e-121 439.5 288 77.1
SGA_v2.0_scaffold116G32294 Striga asiatica HOM05D006055 ORTHO05D007480 4.7e-121 438.3 288 76.7
Nn1g00856 Nelumbo nucifera HOM05D006055 ORTHO05D007480 6.1e-121 438.0 288 74.7
Ca_08070_v3 Cicer arietinum L. HOM05D006055 ORTHO05D007480 1.0e-120 437.2 279 76.0
Sopen01g036070 Solanum pennellii HOM05D006055 ORTHO05D007480 3.1e-120 435.6 288 75.3
Nitab4.5_0000920g0150 Nicotiana tabacum HOM05D006055 ORTHO05D007480 4.0e-120 435.3 288 75.3
CsaV3_6G008610 Cucumis sativus L. HOM05D006055 ORTHO05D007480 5.2e-120 434.9 288 75.0
Nitab4.5_0013736g0020 Nicotiana tabacum HOM05D006055 ORTHO05D007480 6.8e-120 434.5 283 76.3
PSO063G7218 Papaver somniferum HOM05D006055 ORTHO05D007480 1.2e-119 433.7 288 74.3
PSO832G3098 Papaver somniferum HOM05D006055 ORTHO05D007480 1.2e-119 433.7 288 74.3
Psat0s3739g0040 Pisum sativum HOM05D006055 ORTHO05D007480 1.2e-119 433.7 279 75.6
Solyc01g090280.4 Solanum lycopersicum HOM05D006055 ORTHO05D007480 1.5e-119 433.3 288 75.3
Glyma.18G252000 Glycine max HOM05D006055 ORTHO05D007480 3.4e-119 432.2 282 75.2
AUR62013746 Chenopodium quinoa HOM05D006055 ORTHO05D007480 9.8e-119 430.6 295 73.6
CAN.G1473.12 Capsicum annuum HOM05D006055 ORTHO05D007480 1.7e-118 429.9 284 76.1
FAN10G2268 Fragaria x ananassa HOM05D006055 ORTHO05D007480 1.7e-118 429.9 311 71.1
Lalb_Chr13g0290591 Lupinus albus HOM05D006055 ORTHO05D007480 1.7e-118 429.9 288 75.7
Medtr7g081715 Medicago truncatula HOM05D006055 ORTHO05D007480 1.7e-118 429.9 291 73.5
ECA240G2571 Erigeron canadensis HOM05D006055 ORTHO05D007480 2.2e-118 429.5 288 75.3
arahy.Tifrunner.gnm1.ann1.JP1X2J Arachis hypogaea HOM05D006055 ORTHO05D007480 4.9e-118 428.3 300 71.7
arahy.Tifrunner.gnm1.ann1.C7FV9J Arachis hypogaea HOM05D006055 ORTHO05D007480 6.4e-118 427.9 300 71.7
Glyma.13G187100 Glycine max HOM05D006055 ORTHO05D007480 6.4e-118 427.9 286 74.1
HanXRQChr13g0423211 Helianthus annuus HOM05D006055 ORTHO05D007480 8.3e-118 427.6 283 75.6
TPR.G14105 Trifolium pratense HOM05D006055 ORTHO05D007480 2.4e-117 426.0 290 73.1
Duzib133G1573 Durio zibethinus HOM05D006055 ORTHO05D007480 5.4e-117 424.9 288 75.3
SalBow5G1596 Salvia bowleyana HOM05D006055 ORTHO05D007480 1.6e-116 423.3 315 69.5
Hund17088 Selenicereus undatus HOM05D006055 ORTHO05D007480 7.8e-116 421.0 263 77.9
Aqoxy7G00862 Aquilegia oxysepala HOM05D006055 ORTHO05D007480 1.3e-115 420.2 280 74.3
Lsat_1_v5_gn_3_127241 Lactuca sativa HOM05D006055 ORTHO05D007480 8.6e-115 417.5 294 72.4
CSS0048269 Camellia sinensis var. sinensis HOM05D006055 ORTHO05D007480 1.9e-114 416.4 285 73.0
MD02G1211800 Malus domestica HOM05D006055 ORTHO05D007480 1.9e-114 416.4 263 79.1
Lj9C557T10 Lonicera japonica HOM05D006055 ORTHO05D007480 2.5e-114 416.0 285 76.5
SalBow5G4451 Salvia bowleyana HOM05D006055 ORTHO05D007480 4.3e-114 415.2 325 67.4
CDE06G0143 Ceratophyllum demersum HOM05D006055 ORTHO05D007480 5.6e-114 414.8 287 73.2
Glyma.09G242700 Glycine max HOM05D006055 ORTHO05D007480 4.7e-113 411.8 281 72.2
Os06g0140100 Oryza sativa ssp. japonica HOM05D006055 ORTHO05D007480 2.3e-112 409.5 276 72.8
AUR62023405 Chenopodium quinoa HOM05D006055 ORTHO05D007480 1.4e-109 400.2 302 70.9
Ah.16g103830 Amaranthus hybridus HOM05D006055 ORTHO05D007480 1.2e-108 397.1 288 70.1
EL10Ac1g00759 Beta vulgaris HOM05D006055 ORTHO05D007480 2.7e-108 396.0 290 69.3
Phvul.011G190400 Phaseolus vulgaris HOM05D006055 ORTHO05D007480 7.5e-103 377.9 288 68.1
TWI14G1276 Tripterygium wilfordii HOM05D006055 ORTHO05D007480 7.5e-103 377.9 233 82.0
MBI04_g33722_MAGBIO Magnolia biondii HOM05D006055 ORTHO05D007480 7.8e-100 367.9 285 69.1
ClCG06G002510 Citrullus lanatus HOM05D006055 ORTHO05D007480 6.6e-99 364.8 295 65.1
C08p54160 Brassica napus HOM05D006055 ORTHO05D007480 1.5e-98 363.6 221 82.8
Hma1.2p1_0009F.1_g005970 Hydrangea macrophylla HOM05D006055 ORTHO05D007480 1.5e-98 363.6 237 73.8
Haze_02842 Corylus avellana HOM05D006055 ORTHO05D007480 1.4e-96 357.1 276 67.4
Sc02g0003100 Simmondsia chinensis HOM05D006055 ORTHO05D007480 3.4e-95 352.4 261 69.3
ATR0057G026 Amborella trichopoda HOM05D006055 ORTHO05D007480 3.2e-93 345.9 261 65.9
Mapoly0013s0063 Marchantia polymorpha HOM05D006055 ORTHO05D007480 7.3e-90 334.7 280 58.9
Zm00001eb270250 Zea mays HOM05D006055 ORTHO05D007480 7.3e-90 334.7 254 65.7
AagrBONN_evm.TU.Sc2ySwM_344.4855 Anthoceros agrestis HOM05D006055 ORTHO05D007480 6.2e-89 331.6 282 59.9
SEGI_37557 Sequoiadendron giganteum HOM05D006055 ORTHO05D007480 1.0e-83 314.3 233 64.8
SMO169G0267 Selaginella moellendorffii HOM05D006055 ORTHO05D007480 1.3e-83 313.9 284 57.4
Pp3c6_20710 Physcomitrium patens HOM05D006055 ORTHO05D007480 3.9e-83 312.4 284 54.6
CBR_g29813 Chara braunii HOM05D006055 ORTHO05D007480 2.1e-76 290.0 276 53.3
ECA240G0951 Erigeron canadensis HOM05D006055 ORTHO05D007480 7.4e-74 281.6 224 67.0
unitig_578.g16712 Utricularia gibba HOM05D006055 ORTHO05D007480 4.8e-73 278.9 185 72.4
CDE06G0088 Ceratophyllum demersum HOM05D006055 ORTHO05D007480 2.4e-72 276.6 202 68.8
Cre04.g229350 Chlamydomonas reinhardtii HOM05D006055 ORTHO05D007480 1.2e-55 221.1 333 39.0
VMungo1127G0075 Vigna mungo HOM05D006055 ORTHO05D007480 5.5e-53 212.2 150 74.7
Actinidia32500 Actinidia chinensis HOM05D006055 ORTHO05D007480 6.1e-52 208.8 181 62.4
Gohir.A09G116600 Gossypium hirsutum HOM05D006055 ORTHO05D007480 3.4e-47 193.0 143 69.2
HPP92_022088 Vanilla planifolia HOM05D006055 ORTHO05D007480 3.6e-44 183.0 129 69.0
SHI13615 Sapria himalayana HOM05D006055 ORTHO05D007480 2.8e-41 173.3 107 73.8
MCO09G792 Micromonas commoda HOM05D006055 ORTHO05D007480 7.0e-40 168.7 253 39.5
Gohir.D08G159633 Gossypium hirsutum HOM05D006055 ORTHO05D007480 2.4e-32 143.7 97 71.1
PRCOL_00000228 Prasinoderma coloniale HOM05D006055 ORTHO05D007480 4.5e-31 139.4 247 37.7
Zm00001eb438620 Zea mays HOM05D006055 ORTHO05D007480 6.5e-22 109.0 97 56.7
SHI13613 Sapria himalayana HOM05D006055 ORTHO05D007480 2.5e-13 80.5 55 67.3
Phvul.008G046701 Phaseolus vulgaris HOM05D006055 ORTHO05D007480 2.8e-12 77.0 50 76.0


User provided reference genes

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