Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aa31LG11G990 Aethionema arabicum HOM05D006127 ORTHO05D007465 0.0e+00 1116.3 563 100.0
Sp2g25830 Schrenkiella parvula HOM05D006127 ORTHO05D007465 1.5e-250 869.4 534 84.1
AT5G62650 Arabidopsis thaliana HOM05D006127 ORTHO05D007465 1.1e-248 863.2 538 84.2
Thhalv10003967m.g Eutrema salsugineum HOM05D006127 ORTHO05D007465 1.1e-248 863.2 534 83.1
AL8G39630 Arabidopsis lyrata HOM05D006127 ORTHO05D007465 1.2e-247 859.8 537 84.0
CARHR276460 Cardamine hirsuta HOM05D006127 ORTHO05D007465 2.0e-242 842.4 536 81.9
Carub.0008s2341 Capsella rubella HOM05D006127 ORTHO05D007465 2.9e-241 838.6 539 81.8
BcaC01g02503 Brassica carinata HOM05D006127 ORTHO05D007465 2.5e-229 798.9 535 79.1
BraA06t25889Z Brassica rapa HOM05D006127 ORTHO05D007465 2.1e-228 795.8 535 78.7
A06p29390 Brassica napus HOM05D006127 ORTHO05D007465 1.8e-227 792.7 535 78.3
C03p64120 Brassica napus HOM05D006127 ORTHO05D007465 5.3e-227 791.2 535 78.5
BolC3t18667H Brassica oleracea HOM05D006127 ORTHO05D007465 5.3e-227 791.2 535 78.5
BcaB02g09667 Brassica carinata HOM05D006127 ORTHO05D007465 1.1e-221 773.5 536 77.2
THA.LOC104818243 Tarenaya hassleriana HOM05D006127 ORTHO05D007465 7.9e-215 750.7 527 75.5
Ciclev10004691m.g Citrus clementina HOM05D006127 ORTHO05D007465 2.7e-183 646.0 543 65.2
Gorai.003G069400 Gossypium raimondii HOM05D006127 ORTHO05D007465 6.1e-183 644.8 519 66.1
Gohir.D11G229300 Gossypium hirsutum HOM05D006127 ORTHO05D007465 1.0e-182 644.0 515 66.4
COL.COLO4_30292 Corchorus olitorius HOM05D006127 ORTHO05D007465 5.7e-181 638.3 545 64.6
Gohir.A11G225200 Gossypium hirsutum HOM05D006127 ORTHO05D007465 1.3e-180 637.1 544 62.9
Thecc.03G186000 Theobroma cacao HOM05D006127 ORTHO05D007465 3.7e-180 635.6 544 64.3
Atru.chr1.338 Acer truncatum HOM05D006127 ORTHO05D007465 1.1e-179 634.0 515 66.4
Manes.06G153500 Manihot esculenta HOM05D006127 ORTHO05D007465 3.1e-179 632.5 548 63.1
TWI23G0320 Tripterygium wilfordii HOM05D006127 ORTHO05D007465 3.1e-179 632.5 541 63.4
Sabra17G0124200 Salix brachista HOM05D006127 ORTHO05D007465 1.2e-178 630.6 552 61.6
Cfa016302 Carpinus fangiana HOM05D006127 ORTHO05D007465 4.5e-178 628.6 532 64.7
Prupe.2G302400 Prunus persica HOM05D006127 ORTHO05D007465 5.0e-177 625.2 540 63.3
Dinv35267 Davidia involucrata HOM05D006127 ORTHO05D007465 8.5e-177 624.4 561 61.5
Potri.017G148900 Populus trichocarpa HOM05D006127 ORTHO05D007465 8.5e-177 624.4 549 61.0
MD07G1280200 Malus domestica HOM05D006127 ORTHO05D007465 4.2e-176 622.1 540 63.7
CSS0002355 Camellia sinensis var. sinensis HOM05D006127 ORTHO05D007465 2.7e-175 619.4 556 62.1
PGR044G2596 Punica granatum HOM05D006127 ORTHO05D007465 4.7e-175 618.6 543 61.5
QL09p012458 Quercus lobata HOM05D006127 ORTHO05D007465 3.0e-174 615.9 542 63.1
MD01G1210100 Malus domestica HOM05D006127 ORTHO05D007465 1.2e-173 614.0 447 70.2
CSS0021566 Camellia sinensis var. sinensis HOM05D006127 ORTHO05D007465 1.5e-173 613.6 560 61.8
MSTRG.8699 Avicennia marina HOM05D006127 ORTHO05D007465 1.1e-171 607.4 561 59.9
Nitab4.5_0000472g0230 Nicotiana tabacum HOM05D006127 ORTHO05D007465 5.3e-171 605.1 469 68.9
Potri.004G072100 Populus trichocarpa HOM05D006127 ORTHO05D007465 3.5e-170 602.4 513 62.8
Peaxi162Scf00444g00314 Petunia axillaris HOM05D006127 ORTHO05D007465 7.7e-170 601.3 471 67.9
CsaV3_5G001020 Cucumis sativus L. HOM05D006127 ORTHO05D007465 1.9e-168 596.7 563 56.8
Nitab4.5_0001331g0020 Nicotiana tabacum HOM05D006127 ORTHO05D007465 4.2e-168 595.5 475 66.9
Glyma.09G129300 Glycine max HOM05D006127 ORTHO05D007465 5.5e-168 595.1 546 60.8
PGSC0003DMG400009503 Solanum tuberosum HOM05D006127 ORTHO05D007465 9.4e-168 594.3 472 67.2
HanXRQChr00c0486g0575011 Helianthus annuus HOM05D006127 ORTHO05D007465 2.1e-167 593.2 545 58.3
Dinv28380 Davidia involucrata HOM05D006127 ORTHO05D007465 8.0e-167 591.3 565 59.6
Lj2g0027649 Lotus japonicus HOM05D006127 ORTHO05D007465 8.0e-167 591.3 556 58.5
Lalb_Chr01g0009501 Lupinus albus HOM05D006127 ORTHO05D007465 8.0e-167 591.3 521 61.4
FAN03G3352 Fragaria x ananassa HOM05D006127 ORTHO05D007465 1.0e-166 590.9 520 61.9
CiPaw.06G004100 Carya illinoinensis HOM05D006127 ORTHO05D007465 3.0e-166 589.3 499 63.9
FAN03G2078 Fragaria x ananassa HOM05D006127 ORTHO05D007465 4.0e-166 589.0 522 62.3
Actinidia34165 Actinidia chinensis HOM05D006127 ORTHO05D007465 5.2e-166 588.6 547 61.6
Gorai.006G199600 Gossypium raimondii HOM05D006127 ORTHO05D007465 5.2e-166 588.6 533 60.4
Solyc03g007620.3 Solanum lycopersicum HOM05D006127 ORTHO05D007465 6.8e-166 588.2 470 66.6
Sopen03g003570 Solanum pennellii HOM05D006127 ORTHO05D007465 6.8e-166 588.2 470 66.8
Ca_26803_v3 Cicer arietinum L. HOM05D006127 ORTHO05D007465 8.8e-166 587.8 552 59.1
FAN10G2357 Fragaria x ananassa HOM05D006127 ORTHO05D007465 1.5e-165 587.0 525 62.1
Eucgr.A02719 Eucalyptus grandis HOM05D006127 ORTHO05D007465 2.6e-165 586.3 485 65.8
FAN06G1782 Fragaria x ananassa HOM05D006127 ORTHO05D007465 3.4e-165 585.9 520 61.2
FAN06G3350 Fragaria x ananassa HOM05D006127 ORTHO05D007465 3.4e-165 585.9 520 62.1
FAN10G0315 Fragaria x ananassa HOM05D006127 ORTHO05D007465 4.4e-165 585.5 525 62.1
RcHm_v2.0_Chr1g0378611 Rosa chinensis HOM05D006127 ORTHO05D007465 5.7e-165 585.1 523 61.0
Phvul.004G105900 Phaseolus vulgaris HOM05D006127 ORTHO05D007465 1.7e-164 583.6 547 59.6
Gohir.D09G177600 Gossypium hirsutum HOM05D006127 ORTHO05D007465 2.8e-164 582.8 538 60.2
CAN.G236.3 Capsicum annuum HOM05D006127 ORTHO05D007465 4.8e-164 582.0 469 67.0
MELO3C005842.2 Cucumis melo HOM05D006127 ORTHO05D007465 1.4e-163 580.5 563 55.2
ClCG01G000890 Citrullus lanatus HOM05D006127 ORTHO05D007465 3.1e-163 579.3 562 56.8
Sabra04G0047500 Salix brachista HOM05D006127 ORTHO05D007465 1.6e-162 577.0 605 54.0
Sc13g0009280 Simmondsia chinensis HOM05D006127 ORTHO05D007465 2.0e-162 576.6 476 64.1
TAR374G0777 Trochodendron aralioides HOM05D006127 ORTHO05D007465 4.5e-162 575.5 476 62.8
Lsat_1_v5_gn_9_56840 Lactuca sativa HOM05D006127 ORTHO05D007465 1.3e-161 573.9 468 64.5
CiPaw.05G261300 Carya illinoinensis HOM05D006127 ORTHO05D007465 1.1e-160 570.9 441 66.7
Sed0008008 Sechium edule HOM05D006127 ORTHO05D007465 1.5e-160 570.5 563 56.0
Migut.F00277 Erythranthe guttata HOM05D006127 ORTHO05D007465 7.2e-160 568.2 562 56.8
ECA232G4568 Erigeron canadensis HOM05D006127 ORTHO05D007465 9.5e-160 567.8 522 59.6
Medtr6g053110 Medicago truncatula HOM05D006127 ORTHO05D007465 1.0e-158 564.3 544 58.5
HanXRQChr15g0494171 Helianthus annuus HOM05D006127 ORTHO05D007465 1.8e-158 563.5 528 58.1
Haze_00059 Corylus avellana HOM05D006127 ORTHO05D007465 6.8e-158 561.6 532 60.3
Lj1A1007G54 Lonicera japonica HOM05D006127 ORTHO05D007465 6.8e-158 561.6 486 63.6
Gohir.A09G182900 Gossypium hirsutum HOM05D006127 ORTHO05D007465 1.2e-157 560.8 527 59.4
Glyma.16G177100 Glycine max HOM05D006127 ORTHO05D007465 1.2e-154 550.8 544 58.1
arahy.Tifrunner.gnm1.ann1.HXNP43 Arachis hypogaea HOM05D006127 ORTHO05D007465 5.9e-154 548.5 541 56.9
PSO478G4852 Papaver somniferum HOM05D006127 ORTHO05D007465 1.3e-153 547.4 557 53.9
arahy.Tifrunner.gnm1.ann1.AR9FJK Arachis hypogaea HOM05D006127 ORTHO05D007465 1.7e-153 547.0 559 55.8
BcaB02g09671 Brassica carinata HOM05D006127 ORTHO05D007465 1.7e-153 547.0 535 60.6
Cc02_g02250 Coffea canephora HOM05D006127 ORTHO05D007465 2.3e-153 546.6 441 65.3
PSO266G0017 Papaver somniferum HOM05D006127 ORTHO05D007465 1.1e-152 544.3 564 53.7
DCAR_008898 Daucus carota HOM05D006127 ORTHO05D007465 1.9e-152 543.5 474 62.0
Nn6g32416 Nelumbo nucifera HOM05D006127 ORTHO05D007465 1.0e-150 537.7 513 57.3
Aqoxy7G00200 Aquilegia oxysepala HOM05D006127 ORTHO05D007465 4.0e-150 535.8 478 60.3
Cpa.g.sc107.127 Carica papaya HOM05D006127 ORTHO05D007465 5.4e-147 525.4 437 64.8
EL10Ac3g05405 Beta vulgaris HOM05D006127 ORTHO05D007465 5.0e-145 518.8 474 60.3
unitig_747.g21859 Utricularia gibba HOM05D006127 ORTHO05D007465 5.0e-145 518.8 514 56.2
SGA_v2.0_scaffold60G21123 Striga asiatica HOM05D006127 ORTHO05D007465 2.5e-144 516.5 564 52.7
AUR62031438 Chenopodium quinoa HOM05D006127 ORTHO05D007465 3.3e-144 516.2 468 60.5
GSVIVG01028824001 Vitis vinifera HOM05D006127 ORTHO05D007465 4.7e-143 512.3 432 61.8
Oeu003330.1 Olea europaea HOM05D006127 ORTHO05D007465 2.6e-141 506.5 416 62.5
ATR0721G168 Amborella trichopoda HOM05D006127 ORTHO05D007465 1.3e-137 494.2 497 55.3
Hund04798 Selenicereus undatus HOM05D006127 ORTHO05D007465 8.1e-135 485.0 677 45.8
Ah.07g206460 Amaranthus hybridus HOM05D006127 ORTHO05D007465 1.5e-133 480.7 538 52.8
Zm00001eb119480 Zea mays HOM05D006127 ORTHO05D007465 7.6e-133 478.4 530 53.6
CDE04G3725 Ceratophyllum demersum HOM05D006127 ORTHO05D007465 2.2e-132 476.9 508 51.6
TPR.G9177 Trifolium pratense HOM05D006127 ORTHO05D007465 1.0e-129 468.0 329 72.3
Rhsim03G0192200 Rhododendron simsii HOM05D006127 ORTHO05D007465 5.1e-129 465.7 556 52.2
Psat0s2186g0040 Pisum sativum HOM05D006127 ORTHO05D007465 8.6e-129 464.9 374 66.6
vmacro06616 Vaccinium macrocarpon HOM05D006127 ORTHO05D007465 1.5e-128 464.2 532 53.2
HPP92_008801 Vanilla planifolia HOM05D006127 ORTHO05D007465 3.6e-127 459.5 523 50.1
FvH4_7g30450 Fragaria vesca HOM05D006127 ORTHO05D007465 3.8e-124 449.5 346 66.8
AUR62021102 Chenopodium quinoa HOM05D006127 ORTHO05D007465 6.0e-122 442.2 470 54.7
Ah.13g069260 Amaranthus hybridus HOM05D006127 ORTHO05D007465 1.9e-120 437.2 420 57.1
Oeu027861.1 Olea europaea HOM05D006127 ORTHO05D007465 1.6e-98 364.4 439 50.1
VMungo0464G0768 Vigna mungo HOM05D006127 ORTHO05D007465 1.6e-98 364.4 316 63.0
Nn1g01683 Nelumbo nucifera HOM05D006127 ORTHO05D007465 1.1e-94 351.7 479 47.0
HPP92_005266 Vanilla planifolia HOM05D006127 ORTHO05D007465 3.2e-91 340.1 385 49.6
SGA_v2.0_scaffold192G40622 Striga asiatica HOM05D006127 ORTHO05D007465 1.1e-86 325.1 262 63.4
CDE03G0317 Ceratophyllum demersum HOM05D006127 ORTHO05D007465 1.9e-83 314.3 238 61.3
Os01g0225300 Oryza sativa ssp. japonica HOM05D006127 ORTHO05D007465 2.0e-69 267.7 289 51.9
FAN01G1207 Fragaria x ananassa HOM05D006127 ORTHO05D007465 1.7e-68 264.6 219 61.6
AagrBONN_evm.TU.Sc2ySwM_368.2100 Anthoceros agrestis HOM05D006127 ORTHO05D007465 2.6e-64 250.8 498 36.3
Mapoly0009s0032 Marchantia polymorpha HOM05D006127 ORTHO05D007465 3.3e-64 250.4 413 38.3
Pp3c17_22580 Physcomitrium patens HOM05D006127 ORTHO05D007465 2.7e-53 214.2 555 31.0
arahy.Tifrunner.gnm1.ann1.KML1I1 Arachis hypogaea HOM05D006127 ORTHO05D007465 5.0e-44 183.3 243 47.3
AL8G39600 Arabidopsis lyrata HOM05D000171 ORTHO05D000101 2.5e-35 154.5 93 83.9
SEGI_03634 Sequoiadendron giganteum HOM05D006127 ORTHO05D007465 3.6e-34 150.6 121 57.9
Cfa002216 Carpinus fangiana HOM05D006127 ORTHO05D007465 2.9e-31 141.0 242 40.5
SMO266G0103 Selaginella moellendorffii HOM05D006127 ORTHO05D007465 2.4e-30 137.9 205 38.0
TPR.G9175 Trifolium pratense HOM05D006127 ORTHO05D007465 6.4e-23 113.2 83 66.3
COL.COLO4_36023 Corchorus olitorius HOM05D006127 ORTHO05D161883 1.4e-22 112.1 62 82.3
TPR.G27774 Trifolium pratense HOM05D006127 ORTHO05D007465 7.1e-22 109.8 128 50.0
Ah.13g069250 Amaranthus hybridus HOM05D006127 ORTHO05D007465 1.1e-14 85.9 124 49.2
SEGI_25179 Sequoiadendron giganteum HOM05D006127 ORTHO05D007465 4.1e-14 84.0 83 51.8
Aqoxy1G04253 Aquilegia oxysepala HOM05D006127 ORTHO05D078839 3.2e-06 57.8 48 60.4


User provided reference genes

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