Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aa31LG11G9210 Aethionema arabicum HOM05D004239 ORTHO05D005191 5.9e-217 757.3 393 100.0
AL6G39560 Arabidopsis lyrata HOM05D004239 ORTHO05D005191 2.5e-167 592.4 386 81.6
BraA09t36167Z Brassica rapa HOM05D004239 ORTHO05D005191 3.3e-167 592.0 386 79.5
A09p05280 Brassica napus HOM05D004239 ORTHO05D005191 4.7e-166 588.2 387 79.6
Thhalv10004396m.g Eutrema salsugineum HOM05D004239 ORTHO05D005191 3.1e-165 585.5 386 79.8
Carub.0006s2508 Capsella rubella HOM05D004239 ORTHO05D005191 4.0e-165 585.1 386 80.8
Sp2g20670 Schrenkiella parvula HOM05D004239 ORTHO05D005191 6.8e-165 584.3 386 79.5
BcaB04g19671 Brassica carinata HOM05D004239 ORTHO05D005191 4.9e-163 578.2 388 79.1
AT5G27450 Arabidopsis thaliana HOM05D004239 ORTHO05D005191 8.3e-163 577.4 386 80.1
C09p05760 Brassica napus HOM05D004239 ORTHO05D005191 7.1e-162 574.3 387 78.8
BolC2t11880H Brassica oleracea HOM05D004239 ORTHO05D005191 6.0e-161 571.2 386 76.9
A02p38630 Brassica napus HOM05D004239 ORTHO05D005191 1.7e-160 569.7 386 76.9
BraA02t08839Z Brassica rapa HOM05D004239 ORTHO05D005191 1.7e-160 569.7 386 76.7
C02p58120 Brassica napus HOM05D004239 ORTHO05D005191 3.9e-160 568.5 386 76.9
CARHR186060 Cardamine hirsuta HOM05D004239 ORTHO05D005191 3.9e-160 568.5 386 77.7
BcaC04g23678 Brassica carinata HOM05D004239 ORTHO05D005191 6.6e-160 567.8 387 77.5
BolC9t53503H Brassica oleracea HOM05D004239 ORTHO05D005191 6.6e-160 567.8 387 77.5
THA.LOC104802807 Tarenaya hassleriana HOM05D004239 ORTHO05D005191 2.3e-152 542.7 387 74.9
Potri.005G035300 Populus trichocarpa HOM05D004239 ORTHO05D005191 5.2e-149 531.6 386 72.0
BcaC03g17788 Brassica carinata HOM05D004239 ORTHO05D005191 2.2e-147 526.2 386 73.1
CiPaw.07G016500 Carya illinoinensis HOM05D004239 ORTHO05D005191 8.4e-147 524.2 386 72.0
Cpa.g.sc48.35 Carica papaya HOM05D004239 ORTHO05D005191 5.4e-146 521.5 388 70.4
Potri.013G024000 Populus trichocarpa HOM05D004239 ORTHO05D005191 5.4e-146 521.5 386 71.2
Prupe.6G327600 Prunus persica HOM05D004239 ORTHO05D005191 7.1e-146 521.2 386 71.2
QL03p006503 Quercus lobata HOM05D004239 ORTHO05D005191 9.3e-146 520.8 386 71.5
Cfa006576 Carpinus fangiana HOM05D004239 ORTHO05D005191 2.1e-145 519.6 386 70.5
Eucgr.B01993 Eucalyptus grandis HOM05D004239 ORTHO05D005191 7.8e-145 517.7 386 70.7
FvH4_6g05650 Fragaria vesca HOM05D004239 ORTHO05D005191 8.7e-144 514.2 386 70.5
Manes.09G165700 Manihot esculenta HOM05D004239 ORTHO05D005191 1.1e-143 513.8 386 70.5
CANSAT54G0620 Cannabis sativa HOM05D004239 ORTHO05D005191 2.5e-143 512.7 385 71.7
MD12G1220700 Malus domestica HOM05D004239 ORTHO05D005191 2.5e-143 512.7 387 70.8
Ciclev10001383m.g Citrus clementina HOM05D004239 ORTHO05D005191 3.3e-143 512.3 379 71.0
Dinv40275 Davidia involucrata HOM05D004239 ORTHO05D005191 4.3e-143 511.9 387 70.0
Haze_04207 Corylus avellana HOM05D004239 ORTHO05D005191 5.6e-143 511.5 386 69.9
RcHm_v2.0_Chr3g0454501 Rosa chinensis HOM05D004239 ORTHO05D005191 5.6e-143 511.5 386 70.7
Manes.08G122300 Manihot esculenta HOM05D004239 ORTHO05D005191 3.6e-142 508.8 385 69.6
MD04G1206900 Malus domestica HOM05D004239 ORTHO05D005191 9.0e-141 504.2 387 69.3
Peaxi162Scf00037g00226 Petunia axillaris HOM05D004239 ORTHO05D005191 9.0e-141 504.2 386 69.2
Oeu038249.1 Olea europaea HOM05D004239 ORTHO05D005191 7.6e-140 501.1 386 69.2
Oeu027738.1 Olea europaea HOM05D004239 ORTHO05D005191 1.3e-139 500.4 386 68.1
Sopen01g042380 Solanum pennellii HOM05D004239 ORTHO05D005191 2.2e-139 499.6 389 68.1
Actinidia23624 Actinidia chinensis HOM05D004239 ORTHO05D005191 3.8e-139 498.8 388 69.1
Nitab4.5_0005388g0060 Nicotiana tabacum HOM05D004239 ORTHO05D005191 3.8e-139 498.8 386 68.9
Sabra13G0025600 Salix brachista HOM05D004239 ORTHO05D005191 6.4e-139 498.0 404 66.8
Ca_09364_v3 Cicer arietinum L. HOM05D004239 ORTHO05D005191 8.4e-139 497.7 387 68.2
Cc00_g15600 Coffea canephora HOM05D004239 ORTHO05D005191 1.1e-138 497.3 386 68.9
Solyc01g098840.3 Solanum lycopersicum HOM05D004239 ORTHO05D005191 1.4e-138 496.9 389 67.6
Nitab4.5_0009323g0010 Nicotiana tabacum HOM05D004239 ORTHO05D005191 2.4e-138 496.1 387 68.0
PGSC0003DMG401028586 Solanum tuberosum HOM05D004239 ORTHO05D005191 2.4e-138 496.1 389 67.1
TWI36G1635 Tripterygium wilfordii HOM05D004239 ORTHO05D005191 5.4e-138 495.0 388 68.0
Medtr7g113660 Medicago truncatula HOM05D004239 ORTHO05D005191 7.1e-138 494.6 387 68.5
AUR62005132 Chenopodium quinoa HOM05D004239 ORTHO05D005191 9.3e-138 494.2 387 67.7
Glyma.03G239000 Glycine max HOM05D004239 ORTHO05D005191 9.3e-138 494.2 386 67.6
vmacro23128 Vaccinium macrocarpon HOM05D004239 ORTHO05D005191 1.2e-137 493.8 387 67.7
VMungo0540G1286 Vigna mungo HOM05D004239 ORTHO05D005191 2.1e-137 493.0 386 68.1
Rhsim05G0142700 Rhododendron simsii HOM05D004239 ORTHO05D005191 2.7e-137 492.7 388 67.8
vmacro19629 Vaccinium macrocarpon HOM05D004239 ORTHO05D005191 4.6e-137 491.9 388 67.3
Phvul.006G092900 Phaseolus vulgaris HOM05D004239 ORTHO05D005191 1.3e-136 490.3 386 67.9
GSVIVG01000037001 Vitis vinifera HOM05D004239 ORTHO05D005191 1.3e-136 490.3 394 67.0
Psat3g010600 Pisum sativum HOM05D004239 ORTHO05D005191 1.8e-136 490.0 387 66.9
TWI12G0310 Tripterygium wilfordii HOM05D004239 ORTHO05D005191 1.8e-136 490.0 387 68.2
EL10Ac4g09340 Beta vulgaris HOM05D004239 ORTHO05D005191 2.3e-136 489.6 386 66.8
CAN.G1077.21 Capsicum annuum HOM05D004239 ORTHO05D005191 3.9e-136 488.8 386 66.6
Sed0007278 Sechium edule HOM05D004239 ORTHO05D005191 5.1e-136 488.4 387 67.4
arahy.Tifrunner.gnm1.ann1.VWT09S Arachis hypogaea HOM05D004239 ORTHO05D005191 8.7e-136 487.6 388 68.3
MSTRG.5107 Avicennia marina HOM05D004239 ORTHO05D005191 1.1e-135 487.3 386 67.1
PSO063G4628 Papaver somniferum HOM05D004239 ORTHO05D005191 1.1e-135 487.3 387 66.1
Lalb_Chr04g0260811 Lupinus albus HOM05D004239 ORTHO05D005191 3.3e-135 485.7 386 66.8
TAR636G0428 Trochodendron aralioides HOM05D004239 ORTHO05D005191 4.3e-135 485.3 386 66.6
Hund21687 Selenicereus undatus HOM05D004239 ORTHO05D005191 5.6e-135 485.0 386 66.8
FAN14G2823 Fragaria x ananassa HOM05D004239 ORTHO05D005191 9.6e-135 484.2 386 67.6
Sed0006954 Sechium edule HOM05D004239 ORTHO05D005191 9.6e-135 484.2 387 66.1
ClCG02G015900 Citrullus lanatus HOM05D004239 ORTHO05D005191 1.6e-134 483.4 386 67.9
Migut.N01997 Erythranthe guttata HOM05D004239 ORTHO05D005191 1.6e-134 483.4 386 67.1
TPR.G33198 Trifolium pratense HOM05D004239 ORTHO05D005191 1.6e-134 483.4 391 67.3
Aqoxy2G03302 Aquilegia oxysepala HOM05D004239 ORTHO05D005191 4.8e-134 481.9 388 66.8
AUR62000841 Chenopodium quinoa HOM05D004239 ORTHO05D005191 4.8e-134 481.9 399 65.2
MELO3C004278.2 Cucumis melo HOM05D004239 ORTHO05D005191 4.8e-134 481.9 389 66.1
CsaV3_2G005140 Cucumis sativus L. HOM05D004239 ORTHO05D005191 4.8e-134 481.9 389 66.3
Nn4g26228 Nelumbo nucifera HOM05D004239 ORTHO05D005191 8.1e-134 481.1 389 65.3
SGA_v2.0_scaffold81G26082 Striga asiatica HOM05D004239 ORTHO05D005191 1.1e-133 480.7 386 66.3
DCAR_029425 Daucus carota HOM05D004239 ORTHO05D005191 1.4e-133 480.3 386 65.3
FAN05G5256 Fragaria x ananassa HOM05D004239 ORTHO05D005191 3.1e-133 479.2 386 67.4
Peaxi162Scf00471g00018 Petunia axillaris HOM05D004239 ORTHO05D005191 5.8e-132 474.9 386 66.6
arahy.Tifrunner.gnm1.ann1.5NK7V3 Arachis hypogaea HOM05D004239 ORTHO05D005191 1.3e-131 473.8 412 64.3
Nn1g02198 Nelumbo nucifera HOM05D004239 ORTHO05D005191 1.7e-131 473.4 388 64.7
CSS0041428 Camellia sinensis var. sinensis HOM05D004239 ORTHO05D005191 4.9e-131 471.9 391 67.3
PGR083G1755 Punica granatum HOM05D004239 ORTHO05D005191 6.4e-131 471.5 389 65.3
SalBow3G0110 Salvia bowleyana HOM05D004239 ORTHO05D005191 3.2e-130 469.2 386 65.8
FAN14G1612 Fragaria x ananassa HOM05D004239 ORTHO05D005191 9.3e-130 467.6 418 62.4
unitig_0.g2376 Utricularia gibba HOM05D004239 ORTHO05D005191 1.6e-129 466.8 388 64.9
FAN02G3565 Fragaria x ananassa HOM05D004239 ORTHO05D005191 2.7e-129 466.1 418 62.7
Duzib106G0174 Durio zibethinus HOM05D004239 ORTHO05D005191 6.0e-129 464.9 387 64.1
FAN09G3705 Fragaria x ananassa HOM05D004239 ORTHO05D005191 1.8e-128 463.4 418 62.4
FAN05G0638 Fragaria x ananassa HOM05D004239 ORTHO05D005191 1.5e-127 460.3 418 62.0
Lj9A25G19 Lonicera japonica HOM05D004239 ORTHO05D005191 4.3e-127 458.8 386 64.0
Lj9A26G17 Lonicera japonica HOM05D004239 ORTHO05D005191 4.3e-127 458.8 386 64.0
Lsat_1_v5_gn_4_139401 Lactuca sativa HOM05D004239 ORTHO05D005191 4.8e-126 455.3 388 62.9
Thecc.05G305000 Theobroma cacao HOM05D004239 ORTHO05D005191 4.8e-126 455.3 387 62.3
Gohir.A11G295900 Gossypium hirsutum HOM05D004239 ORTHO05D005191 6.2e-126 454.9 387 63.3
Gohir.D11G311000 Gossypium hirsutum HOM05D004239 ORTHO05D005191 8.1e-126 454.5 387 63.6
ECA234G2741 Erigeron canadensis HOM05D004239 ORTHO05D005191 1.8e-125 453.4 390 62.8
Gorai.007G342800 Gossypium raimondii HOM05D004239 ORTHO05D005191 5.3e-125 451.8 387 63.3
Dinv23953 Davidia involucrata HOM05D004239 ORTHO05D005191 4.5e-124 448.7 353 68.3
HanXRQChr09g0259671 Helianthus annuus HOM05D004239 ORTHO05D005191 8.4e-123 444.5 391 61.4
Lj1g0017751 Lotus japonicus HOM05D004239 ORTHO05D005191 1.6e-121 440.3 364 65.4
TAR365G0701 Trochodendron aralioides HOM05D004239 ORTHO05D005191 5.1e-120 435.3 350 66.0
Sc09g0003220 Simmondsia chinensis HOM05D004239 ORTHO05D005191 1.1e-119 434.1 351 66.4
ATR0561G047 Amborella trichopoda HOM05D004239 ORTHO05D005191 4.1e-117 425.6 389 58.6
Zm00001eb209270 Zea mays HOM05D004239 ORTHO05D005191 1.0e-115 421.0 390 57.4
ClCG10G005450 Citrullus lanatus HOM05D004239 ORTHO05D005191 2.2e-115 419.9 387 61.2
Actinidia19795 Actinidia chinensis HOM05D004239 ORTHO05D005191 2.5e-114 416.4 343 65.3
Glyma.19G236200 Glycine max HOM05D004239 ORTHO05D005191 9.3e-114 414.5 334 65.6
Os10g0329300 Oryza sativa ssp. japonica HOM05D004239 ORTHO05D005191 1.2e-113 414.1 390 57.4
Zm00001eb209470 Zea mays HOM05D004239 ORTHO05D005191 3.9e-112 409.1 379 57.8
Lsat_1_v5_gn_2_64361 Lactuca sativa HOM05D004239 ORTHO05D005191 5.1e-112 408.7 404 56.2
SEGI_00819 Sequoiadendron giganteum HOM05D004239 ORTHO05D005191 6.7e-112 408.3 392 56.1
Gorai.007G296000 Gossypium raimondii HOM05D004239 ORTHO05D005191 3.2e-106 389.4 387 56.6
Sed0017775 Sechium edule HOM05D004239 ORTHO05D005191 9.4e-106 387.9 400 55.8
Nitab4.5_0002031g0070 Nicotiana tabacum HOM05D004239 ORTHO05D005191 4.6e-105 385.6 386 57.0
SHI18197 Sapria himalayana HOM05D004239 ORTHO05D005191 1.7e-102 377.1 396 54.8
Gohir.D11G274300 Gossypium hirsutum HOM05D004239 ORTHO05D005191 5.0e-99 365.5 387 55.3
CDE02G3721 Ceratophyllum demersum HOM05D004239 ORTHO05D005191 1.5e-95 354.0 294 60.2
Pp3c22_490 Physcomitrium patens HOM05D004239 ORTHO05D005191 4.2e-90 335.9 413 48.9
MELO3C004281.2 Cucumis melo HOM05D004239 ORTHO05D005191 9.7e-87 324.7 274 64.6
Mapoly0214s0007 Marchantia polymorpha HOM05D004239 ORTHO05D005191 2.2e-83 313.5 437 43.0
AagrBONN_evm.TU.Sc2ySwM_368.2263 Anthoceros agrestis HOM05D004239 ORTHO05D005191 1.2e-79 301.2 369 47.4
HPP92_020860 Vanilla planifolia HOM05D004239 ORTHO05D005191 3.8e-75 286.2 266 57.9
SMO347G0436 Selaginella moellendorffii HOM05D004239 ORTHO05D005191 3.2e-74 283.1 388 43.6
Actinidia05711 Actinidia chinensis HOM05D004239 ORTHO05D005191 2.0e-71 273.9 223 65.9
RcHm_v2.0_Chr7g0220931 Rosa chinensis HOM05D004239 ORTHO05D005191 1.4e-69 267.7 302 54.3
CBR_g3053 Chara braunii HOM05D004239 ORTHO05D005191 1.9e-58 230.7 464 36.0
SMO167G0025 Selaginella moellendorffii HOM05D004239 ORTHO05D005191 5.0e-51 206.1 240 48.3
CSS0049885 Camellia sinensis var. sinensis HOM05D004239 ORTHO05D005191 8.1e-49 198.7 165 62.4
Cfa007056 Carpinus fangiana HOM05D004239 ORTHO05D005191 6.0e-44 182.6 147 70.1
Nitab4.5_0000327g0030 Nicotiana tabacum HOM05D004239 ORTHO05D005191 5.1e-43 179.5 142 67.6
RcHm_v2.0_Chr3g0454481 Rosa chinensis HOM05D004239 ORTHO05D005191 1.1e-37 161.8 123 69.9
vmacro05023 Vaccinium macrocarpon HOM05D004239 ORTHO05D005191 6.0e-36 156.0 178 54.5
Cfa027123 Carpinus fangiana HOM05D004239 ORTHO05D005191 2.3e-35 154.1 394 30.7
Zm00001eb063950 Zea mays HOM05D004239 ORTHO05D005191 2.9e-30 137.1 167 46.7
COL.COLO4_16926 Corchorus olitorius HOM05D004239 ORTHO05D005191 1.9e-29 134.4 108 65.7
RcHm_v2.0_Chr7g0220941 Rosa chinensis HOM05D004239 ORTHO05D005191 3.5e-28 130.2 84 78.6
AagrBONN_evm.TU.Sc2ySwM_117.3520 Anthoceros agrestis HOM05D004239 ORTHO05D005191 1.5e-26 124.8 213 39.4
Actinidia05710 Actinidia chinensis HOM05D004239 ORTHO05D005191 3.4e-23 113.6 75 73.3
Lj5A557G19 Lonicera japonica HOM05D004239 ORTHO05D005191 1.3e-22 111.7 150 47.3
Lj5A557T20 Lonicera japonica HOM05D004239 ORTHO05D005191 1.9e-21 107.8 156 46.2
Lj5A555G9 Lonicera japonica HOM05D004239 ORTHO05D005191 2.3e-19 100.9 139 47.5
Lj5A556G14 Lonicera japonica HOM05D004239 ORTHO05D005191 4.8e-17 93.2 121 47.9
Lj5A549T14 Lonicera japonica HOM05D004239 ORTHO05D005191 9.0e-16 89.0 128 47.7
Lj5A558T16 Lonicera japonica HOM05D004239 ORTHO05D005191 7.6e-15 85.9 128 46.9
Zm00001eb252600 Zea mays HOM05D004239 ORTHO05D005191 9.9e-15 85.5 107 48.6
Lj5A558T15 Lonicera japonica HOM05D004239 ORTHO05D005191 4.9e-14 83.2 90 48.9
Lsat_1_v5_gn_7_76161 Lactuca sativa HOM05D004239 ORTHO05D005191 6.4e-14 82.8 75 54.7
Zm00001eb193770 Zea mays HOM05D004239 ORTHO05D445176 4.2e-13 80.1 91 44.0
Zm00001eb313220 Zea mays HOM05D004239 ORTHO05D005191 7.1e-13 79.3 90 52.2
Lj5A552G14 Lonicera japonica HOM05D004239 ORTHO05D005191 7.9e-12 75.9 83 49.4
CiPaw.07G016300 Carya illinoinensis HOM05D006625 ORTHO05D008060 1.0e-11 75.5 42 88.1
Oeu038248.1 Olea europaea HOM05D004239 ORTHO05D288322 3.0e-11 73.9 43 86.0
Lj5A550T6 Lonicera japonica HOM05D004239 ORTHO05D005191 1.1e-10 72.0 127 40.9
COL.COLO4_16925 Corchorus olitorius HOM05D004239 ORTHO05D005191 5.6e-10 69.7 47 66.0
Zm00001eb342830 Zea mays HOM05D004239 ORTHO05D005191 1.5e-07 61.6 38 81.6
Zm00001eb019540 Zea mays HOM05D000931 ORTHO05D001924 2.6e-07 60.8 46 69.6
arahy.Tifrunner.gnm1.ann1.04YHM3 Arachis hypogaea HOM05D004239 ORTHO05D005191 7.6e-07 59.3 102 44.1
Zm00001eb406200 Zea mays HOM05D004239 ORTHO05D005191 1.7e-06 58.2 86 44.2
Potri.015G125201 Populus trichocarpa HOM05D004239 ORTHO05D005191 8.4e-06 55.8 52 55.8


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