Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aa31LG11G8290 Aethionema arabicum HOM05D000675 ORTHO05D002086 5.8e-77 290.8 145 100.0
Aa31LG8G12440 Aethionema arabicum HOM05D012680 ORTHO05D002086 5.2e-54 214.5 163 73.6
Aa31LG5G22970 Aethionema arabicum HOM05D012680 ORTHO05D002086 1.6e-23 113.2 157 43.9
Aa31LG7G11060 Aethionema arabicum HOM05D012680 ORTHO05D015807 3.1e-22 109.0 164 42.1
Aa31sc689G30 Aethionema arabicum HOM05D000675 ORTHO05D002086 5.8e-21 104.8 167 40.7
Aa31LG2G16780 Aethionema arabicum HOM05D000675 ORTHO05D015807 1.0e-20 104.0 163 42.3
Aa31LG11G7650 Aethionema arabicum HOM05D012680 ORTHO05D015807 2.5e-19 99.4 155 42.6
Aa31LG5G23570 Aethionema arabicum HOM05D012680 ORTHO05D002086 1.0e-17 94.0 152 39.5
Aa31LG2G17470 Aethionema arabicum HOM05D000675 ORTHO05D002086 3.3e-16 89.0 109 44.0
Aa31LG3G7250 Aethionema arabicum HOM05D000675 ORTHO05D002086 5.7e-16 88.2 99 46.5
Aa31LG1G6150 Aethionema arabicum HOM05D000611 ORTHO05D002086 2.2e-15 86.3 119 42.9
Aa31sc60G80 Aethionema arabicum HOM05D000675 ORTHO05D002086 4.8e-15 85.1 82 53.7
Aa31sc290G10 Aethionema arabicum HOM05D000675 ORTHO05D002086 8.2e-15 84.3 82 54.9
Aa31sc83G10 Aethionema arabicum HOM05D000675 ORTHO05D002086 1.1e-14 84.0 82 53.7
Aa31LG9G4860 Aethionema arabicum HOM05D000675 ORTHO05D002086 2.4e-14 82.8 147 40.1
Aa31sc167G10 Aethionema arabicum HOM05D000675 ORTHO05D002086 5.3e-14 81.6 62 56.5
Aa31LG8G10700 Aethionema arabicum HOM05D000675 ORTHO05D002086 1.2e-13 80.5 115 41.7
Aa31LG9G5030 Aethionema arabicum HOM05D012680 ORTHO05D002086 2.0e-13 79.7 144 37.5
Aa31LG9G7620 Aethionema arabicum HOM05D000675 ORTHO05D002086 2.0e-13 79.7 82 52.4
CARHR152130 Cardamine hirsuta HOM05D000675 ORTHO05D002086 7.7e-13 77.8 155 37.4
Aa31sc36G130 Aethionema arabicum HOM05D000675 ORTHO05D002086 1.7e-12 76.6 144 36.8
A06p23400 Brassica napus HOM05D000675 ORTHO05D002086 1.1e-11 73.9 93 44.1
BolC5t32262H Brassica oleracea HOM05D000675 ORTHO05D015807 5.5e-11 71.6 156 31.4
BolC5t32014H Brassica oleracea HOM05D000675 ORTHO05D002086 9.4e-11 70.9 128 33.6
CARHR104020 Cardamine hirsuta HOM05D000675 ORTHO05D002086 2.7e-10 69.3 82 47.6
BcaC05g25361 Brassica carinata HOM05D000675 ORTHO05D002086 3.6e-10 68.9 97 35.1
BolC5t33356H Brassica oleracea HOM05D000675 ORTHO05D002086 6.1e-10 68.2 71 43.7
Carub.0008s1552 Capsella rubella HOM05D000675 ORTHO05D002086 7.9e-10 67.8 151 32.5
BcaC06g34450 Brassica carinata HOM05D000675 ORTHO05D002086 1.0e-09 67.4 95 33.7
A03p66350 Brassica napus HOM05D000675 ORTHO05D002086 1.4e-09 67.0 99 35.4
BcaB03g15657 Brassica carinata HOM05D000675 ORTHO05D002086 3.9e-09 65.5 72 40.3
BcaB08g34481 Brassica carinata HOM05D000675 ORTHO05D002086 3.9e-09 65.5 96 35.4
BcaC01g04356 Brassica carinata HOM05D000675 ORTHO05D002086 6.7e-09 64.7 97 32.0
BcaC05g27596 Brassica carinata HOM05D000675 ORTHO05D002086 6.7e-09 64.7 98 33.7
C02p40190 Brassica napus HOM05D000675 ORTHO05D002086 6.7e-09 64.7 93 36.6
BcaC08g44362 Brassica carinata HOM05D000675 ORTHO05D002086 1.1e-08 63.9 99 34.3
C02p40160 Brassica napus HOM05D000675 ORTHO05D002086 1.1e-08 63.9 95 36.8
BolC3t15422H Brassica oleracea HOM05D001308 ORTHO05D001170 1.1e-08 63.9 80 42.5
CARHR102470 Cardamine hirsuta HOM05D000675 ORTHO05D002086 2.0e-08 63.2 136 33.1
BcaC02g11404 Brassica carinata HOM05D000675 ORTHO05D002086 2.5e-08 62.8 116 29.3
BcaC05g25703 Brassica carinata HOM05D000675 ORTHO05D002086 2.5e-08 62.8 98 32.7
BcaC08g42855 Brassica carinata HOM05D000675 ORTHO05D002086 2.5e-08 62.8 98 32.7
BcaB03g14368 Brassica carinata HOM05D000675 ORTHO05D002086 3.3e-08 62.4 93 32.3
BcaC03g15594 Brassica carinata HOM05D000675 ORTHO05D002086 3.3e-08 62.4 98 32.7
BcaC09g49807 Brassica carinata HOM05D000675 ORTHO05D002086 3.3e-08 62.4 93 32.3
C03p30730 Brassica napus HOM05D001308 ORTHO05D001170 3.3e-08 62.4 80 42.5
C03p31610 Brassica napus HOM05D000675 ORTHO05D032797 3.3e-08 62.4 88 38.6
C04p26820 Brassica napus HOM05D000675 ORTHO05D002086 3.3e-08 62.4 121 33.1
BolC6t36479H Brassica oleracea HOM05D000977 ORTHO05D001094 3.3e-08 62.4 95 30.5
AT5G15690 Arabidopsis thaliana HOM05D000675 ORTHO05D002086 5.7e-08 61.6 130 30.0
BcaB05g24191 Brassica carinata HOM05D000675 ORTHO05D002086 5.7e-08 61.6 98 31.6
BcaC09g50385 Brassica carinata HOM05D000675 ORTHO05D002086 5.7e-08 61.6 93 32.3
BcaB01g03291 Brassica carinata HOM05D000675 ORTHO05D002086 7.4e-08 61.2 91 33.0
BcaC09g48980 Brassica carinata HOM05D000675 ORTHO05D002086 7.4e-08 61.2 98 32.7
BcaC09g48982 Brassica carinata HOM05D000675 ORTHO05D002086 7.4e-08 61.2 98 32.7
BcaC05g27351 Brassica carinata HOM05D000675 ORTHO05D002086 9.7e-08 60.8 96 31.2
BcaC06g35366 Brassica carinata HOM05D000675 ORTHO05D002086 9.7e-08 60.8 90 33.3
CARHR113850 Cardamine hirsuta HOM05D000675 ORTHO05D002086 9.7e-08 60.8 87 33.3
BcaC04g22824 Brassica carinata HOM05D000675 ORTHO05D002086 1.3e-07 60.5 98 31.6
BolC3t15504H Brassica oleracea HOM05D000675 ORTHO05D032797 1.3e-07 60.5 85 38.8
BolC4t25850H Brassica oleracea HOM05D000675 ORTHO05D002086 1.3e-07 60.5 116 31.0
CARHR044830 Cardamine hirsuta HOM05D000675 ORTHO05D002086 1.7e-07 60.1 77 44.2
CARHR257150 Cardamine hirsuta HOM05D000675 ORTHO05D002086 1.7e-07 60.1 108 28.7
AT4G04775 Arabidopsis thaliana HOM05D000675 ORTHO05D002086 2.2e-07 59.7 150 29.3
BcaB05g21895 Brassica carinata HOM05D000675 ORTHO05D002086 2.2e-07 59.7 91 30.8
BcaB05g22219 Brassica carinata HOM05D000675 ORTHO05D002086 2.2e-07 59.7 91 30.8
C01p31580 Brassica napus HOM05D000675 ORTHO05D013510 2.2e-07 59.7 87 35.6
C02p48400 Brassica napus HOM05D000675 ORTHO05D002086 2.2e-07 59.7 130 29.2
Carub.0003s2743 Capsella rubella HOM05D000675 ORTHO05D002086 2.2e-07 59.7 114 28.9
BcaC03g16749 Brassica carinata HOM05D000675 ORTHO05D002086 2.8e-07 59.3 98 31.6
BcaB08g35730 Brassica carinata HOM05D000675 ORTHO05D002086 3.7e-07 58.9 91 31.9
BcaC03g17205 Brassica carinata HOM05D000675 ORTHO05D002086 3.7e-07 58.9 91 30.8
BolC2t09536H Brassica oleracea HOM05D000675 ORTHO05D002086 3.7e-07 58.9 59 39.0
BolC2t11221H Brassica oleracea HOM05D000675 ORTHO05D002086 3.7e-07 58.9 91 30.8
BcaC05g28255 Brassica carinata HOM05D000675 ORTHO05D002086 4.8e-07 58.5 90 28.9
BcaC05g28481 Brassica carinata HOM05D000675 ORTHO05D002086 4.8e-07 58.5 98 30.6
BcaB04g17253 Brassica carinata HOM05D000977 ORTHO05D001094 6.3e-07 58.2 87 32.2
BcaC05g29029 Brassica carinata HOM05D000675 ORTHO05D002086 6.3e-07 58.2 91 30.8
C09p56350 Brassica napus HOM05D000675 ORTHO05D002086 6.3e-07 58.2 78 34.6
BcaB07g32893 Brassica carinata HOM05D000675 ORTHO05D002086 8.2e-07 57.8 89 30.3
BcaC03g16220 Brassica carinata HOM05D000675 ORTHO05D002086 8.2e-07 57.8 83 30.1
BcaC06g35605 Brassica carinata HOM05D000675 ORTHO05D002086 8.2e-07 57.8 74 32.4
BolC1t03092H Brassica oleracea HOM05D000675 ORTHO05D003044 8.2e-07 57.8 79 34.2
CARHR286550 Cardamine hirsuta HOM05D019929 ORTHO05D032567 8.2e-07 57.8 119 34.5
BcaB04g18535 Brassica carinata HOM05D000675 ORTHO05D002086 1.1e-06 57.4 92 31.5
BcaC06g36214 Brassica carinata HOM05D000675 ORTHO05D002086 1.1e-06 57.4 83 30.1
BraA05t21229Z Brassica rapa HOM05D007462 ORTHO05D002086 1.1e-06 57.4 76 39.5
CARHR151940 Cardamine hirsuta HOM05D000675 ORTHO05D002086 1.1e-06 57.4 80 33.8
BcaC01g00337 Brassica carinata HOM05D000977 ORTHO05D001094 1.4e-06 57.0 97 27.8
BolC5t32956H Brassica oleracea HOM05D009067 ORTHO05D010543 1.4e-06 57.0 58 43.1
BcaB05g24643 Brassica carinata HOM05D000675 ORTHO05D000395 2.4e-06 56.2 127 31.5
BolC2t10044H Brassica oleracea HOM05D009067 ORTHO05D010543 2.4e-06 56.2 62 43.5
CARHR263710 Cardamine hirsuta HOM05D000675 ORTHO05D002086 2.4e-06 56.2 115 27.8
BolC2t12077H Brassica oleracea HOM05D000675 ORTHO05D023943 3.1e-06 55.8 67 34.3
CARHR148640 Cardamine hirsuta HOM05D000675 ORTHO05D002086 3.1e-06 55.8 95 29.5
BcaB01g01312 Brassica carinata HOM05D000675 ORTHO05D003044 4.1e-06 55.5 132 30.3
C04p58390 Brassica napus HOM05D007462 ORTHO05D002086 4.1e-06 55.5 76 36.8
BolC6t36760H Brassica oleracea HOM05D007462 ORTHO05D002086 4.1e-06 55.5 76 36.8
BcaB04g17689 Brassica carinata HOM05D007462 ORTHO05D002086 5.3e-06 55.1 76 38.2
BcaB04g19467 Brassica carinata HOM05D000675 ORTHO05D002086 5.3e-06 55.1 98 30.6
BcaB06g26738 Brassica carinata HOM05D007462 ORTHO05D002086 5.3e-06 55.1 103 33.0
BcaC02g09935 Brassica carinata HOM05D000675 ORTHO05D002086 5.3e-06 55.1 96 27.1
BcaC08g44171 Brassica carinata HOM05D007462 ORTHO05D002086 5.3e-06 55.1 76 36.8
C01p42300 Brassica napus HOM05D000675 ORTHO05D002086 5.3e-06 55.1 96 27.1
C06p13230 Brassica napus HOM05D000675 ORTHO05D032924 5.3e-06 55.1 80 35.0
BolC5t33625H Brassica oleracea HOM05D000675 ORTHO05D002086 5.3e-06 55.1 53 39.6
CARHR118340 Cardamine hirsuta HOM05D000675 ORTHO05D002086 5.3e-06 55.1 125 27.2
BcaB01g01913 Brassica carinata HOM05D000675 ORTHO05D002086 6.9e-06 54.7 71 33.8
BcaC07g36914 Brassica carinata HOM05D000675 ORTHO05D002086 6.9e-06 54.7 91 31.9
BolC2t09674H Brassica oleracea HOM05D000675 ORTHO05D002086 6.9e-06 54.7 59 42.4
BolC4t26247H Brassica oleracea HOM05D007462 ORTHO05D002086 6.9e-06 54.7 76 35.5
CARHR293330 Cardamine hirsuta HOM05D000675 ORTHO05D002086 6.9e-06 54.7 120 31.7
BcaC08g42985 Brassica carinata HOM05D000675 ORTHO05D002086 9.1e-06 54.3 96 27.1
A04p09970 Brassica napus HOM05D000675 ORTHO05D024350 9.1e-06 54.3 101 29.7
C04p27870 Brassica napus HOM05D000675 ORTHO05D032657 9.1e-06 54.3 107 27.1
BolC4t24330H Brassica oleracea HOM05D000675 ORTHO05D032657 9.1e-06 54.3 107 27.1
BraA04t16658Z Brassica rapa HOM05D000675 ORTHO05D024350 9.1e-06 54.3 101 29.7


User provided reference genes

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