Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aa31LG11G3870 Aethionema arabicum HOM05D004660 ORTHO05D005474 5.8e-100 367.5 175 100.0
Carub.0006s2247 Capsella rubella HOM05D004660 ORTHO05D005474 2.3e-72 275.8 148 89.9
Thhalv10005081m.g Eutrema salsugineum HOM05D004660 ORTHO05D005474 1.3e-70 270.0 148 87.2
Sp2g22770 Schrenkiella parvula HOM05D004660 ORTHO05D005474 1.3e-70 270.0 148 87.8
THA.LOC104814957 Tarenaya hassleriana HOM05D004660 ORTHO05D005474 1.7e-70 269.6 146 85.6
AT5G24610 Arabidopsis thaliana HOM05D004660 ORTHO05D005474 3.7e-70 268.5 147 89.8
AL6G36220 Arabidopsis lyrata HOM05D004660 ORTHO05D005474 3.1e-69 265.4 148 87.8
THA.LOC104803315 Tarenaya hassleriana HOM05D004660 ORTHO05D005474 1.5e-68 263.1 146 83.6
CARHR188840 Cardamine hirsuta HOM05D004660 ORTHO05D005474 2.7e-65 252.3 150 84.7
BraA06t25770Z Brassica rapa HOM05D004660 ORTHO05D005474 8.0e-65 250.8 146 82.2
Sp5g12560 Schrenkiella parvula HOM05D004660 ORTHO05D005474 1.0e-64 250.4 146 80.1
Glyma.04G225900 Glycine max HOM05D004660 ORTHO05D005474 3.9e-64 248.4 146 78.1
BcaB02g09594 Brassica carinata HOM05D004660 ORTHO05D005474 6.7e-64 247.7 146 80.1
Cpa.g.sc3.184 Carica papaya HOM05D004660 ORTHO05D005474 6.7e-64 247.7 146 80.1
Glyma.06G138900 Glycine max HOM05D004660 ORTHO05D005474 6.7e-64 247.7 146 77.4
BcaC03g17953 Brassica carinata HOM05D004660 ORTHO05D005474 1.5e-63 246.5 149 81.2
C02p60130 Brassica napus HOM05D004660 ORTHO05D005474 1.5e-63 246.5 149 81.2
BolC2t12069H Brassica oleracea HOM05D004660 ORTHO05D005474 1.5e-63 246.5 149 81.2
Thhalv10010801m.g Eutrema salsugineum HOM05D004660 ORTHO05D005474 7.4e-63 244.2 147 78.9
A02p40180 Brassica napus HOM05D004660 ORTHO05D005474 9.7e-63 243.8 149 80.5
A06p28270 Brassica napus HOM05D004660 ORTHO05D005474 9.7e-63 243.8 146 80.8
A06p35410 Brassica napus HOM05D004660 ORTHO05D005474 9.7e-63 243.8 149 78.5
BraA06t26464Z Brassica rapa HOM05D004660 ORTHO05D005474 9.7e-63 243.8 149 78.5
BraA02t08983Z Brassica rapa HOM05D004660 ORTHO05D005474 1.3e-62 243.4 149 80.5
AL5G29390 Arabidopsis lyrata HOM05D004660 ORTHO05D005474 1.7e-62 243.0 147 80.3
BcaNung01246 Brassica carinata HOM05D004660 ORTHO05D005474 2.8e-62 242.3 149 78.5
BcaB07g29917 Brassica carinata HOM05D004660 ORTHO05D005474 3.7e-62 241.9 149 79.9
Thecc.03G211800 Theobroma cacao HOM05D004660 ORTHO05D005474 4.8e-62 241.5 147 76.9
VMungo1309G2317 Vigna mungo HOM05D004660 ORTHO05D005474 6.3e-62 241.1 147 75.5
Phvul.009G040000 Phaseolus vulgaris HOM05D004660 ORTHO05D005474 2.4e-61 239.2 147 75.5
arahy.Tifrunner.gnm1.ann1.6FR5WN Arachis hypogaea HOM05D004660 ORTHO05D005474 3.1e-61 238.8 146 76.0
Duzib205G1429 Durio zibethinus HOM05D004660 ORTHO05D005474 5.3e-61 238.0 147 76.9
Atru.chr12.2504 Acer truncatum HOM05D004660 ORTHO05D005474 1.2e-60 236.9 146 77.4
Atru.chr12.2527 Acer truncatum HOM05D004660 ORTHO05D005474 1.2e-60 236.9 146 77.4
Ca_16837_v3 Cicer arietinum L. HOM05D004660 ORTHO05D005474 1.2e-60 236.9 145 74.5
TPR.G35910 Trifolium pratense HOM05D004660 ORTHO05D005474 1.2e-60 236.9 146 73.3
Glyma.14G188500 Glycine max HOM05D004660 ORTHO05D005474 1.6e-60 236.5 145 74.5
Migut.F00125 Erythranthe guttata HOM05D004660 ORTHO05D005474 2.6e-60 235.7 146 74.0
Haze_00331 Corylus avellana HOM05D004660 ORTHO05D005474 3.5e-60 235.3 146 76.0
Potri.015G000900 Populus trichocarpa HOM05D004660 ORTHO05D005474 3.5e-60 235.3 148 77.7
GSVIVG01038677001 Vitis vinifera HOM05D004660 ORTHO05D005474 3.5e-60 235.3 146 72.6
Gohir.D08G117700 Gossypium hirsutum HOM05D004660 ORTHO05D005474 7.7e-60 234.2 147 75.5
Gorai.004G126200 Gossypium raimondii HOM05D004660 ORTHO05D005474 7.7e-60 234.2 147 75.5
THA.LOC104799676 Tarenaya hassleriana HOM05D004660 ORTHO05D005474 7.7e-60 234.2 145 75.9
CiPaw.05G208600 Carya illinoinensis HOM05D004660 ORTHO05D005474 1.3e-59 233.4 146 73.3
CiPaw.06G038500 Carya illinoinensis HOM05D004660 ORTHO05D005474 1.3e-59 233.4 146 74.0
Glyma.02G221000 Glycine max HOM05D004660 ORTHO05D005474 1.3e-59 233.4 145 74.5
Hma1.2p1_0115F.1_g055760 Hydrangea macrophylla HOM05D004660 ORTHO05D005474 1.3e-59 233.4 146 74.7
CANSAT21G0927 Cannabis sativa HOM05D004660 ORTHO05D005474 1.7e-59 233.0 150 78.0
Gohir.A08G106300 Gossypium hirsutum HOM05D004660 ORTHO05D005474 2.2e-59 232.6 147 76.2
Phvul.008G188100 Phaseolus vulgaris HOM05D004660 ORTHO05D005474 2.2e-59 232.6 146 73.3
VMungo0647G0407 Vigna mungo HOM05D004660 ORTHO05D005474 3.8e-59 231.9 145 73.1
A01p24630 Brassica napus HOM05D004660 ORTHO05D005474 5.0e-59 231.5 147 78.2
BraA01t02375Z Brassica rapa HOM05D004660 ORTHO05D005474 5.0e-59 231.5 147 78.2
FvH4_7g33300 Fragaria vesca HOM05D004660 ORTHO05D005474 5.0e-59 231.5 146 74.0
BcaC09g49961 Brassica carinata HOM05D004660 ORTHO05D005474 6.5e-59 231.1 147 78.9
BolC1t03007H Brassica oleracea HOM05D004660 ORTHO05D005474 6.5e-59 231.1 147 78.9
Solyc03g079970.1 Solanum lycopersicum HOM05D004660 ORTHO05D005474 6.5e-59 231.1 146 74.7
Sopen03g021700 Solanum pennellii HOM05D004660 ORTHO05D005474 6.5e-59 231.1 146 74.7
PGSC0003DMG400000574 Solanum tuberosum HOM05D004660 ORTHO05D005474 6.5e-59 231.1 146 74.7
Ciclev10022731m.g Citrus clementina HOM05D004660 ORTHO05D005474 8.5e-59 230.7 146 74.0
vmacro10172 Vaccinium macrocarpon HOM05D004660 ORTHO05D005474 8.5e-59 230.7 146 73.3
AT3G49550 Arabidopsis thaliana HOM05D004660 ORTHO05D005474 1.5e-58 229.9 150 78.7
DCAR_014568 Daucus carota HOM05D004660 ORTHO05D005474 2.5e-58 229.2 146 75.3
FAN10G1296 Fragaria x ananassa HOM05D004660 ORTHO05D005474 4.2e-58 228.4 146 72.6
FAN10G4080 Fragaria x ananassa HOM05D004660 ORTHO05D005474 4.2e-58 228.4 146 72.6
Lj1P1031T30 Lonicera japonica HOM05D004660 ORTHO05D005474 4.2e-58 228.4 149 72.5
Lj1g0017846 Lotus japonicus HOM05D004660 ORTHO05D005474 4.2e-58 228.4 146 71.9
FAN01G2536 Fragaria x ananassa HOM05D004660 ORTHO05D005474 5.5e-58 228.0 146 73.3
Psat5g071200 Pisum sativum HOM05D004660 ORTHO05D005474 5.5e-58 228.0 148 74.3
Rhsim09G0211000 Rhododendron simsii HOM05D004660 ORTHO05D005474 7.2e-58 227.6 146 71.9
Sed0024142 Sechium edule HOM05D004660 ORTHO05D005474 7.2e-58 227.6 146 72.6
MSTRG.26954 Avicennia marina HOM05D004660 ORTHO05D005474 9.4e-58 227.3 146 70.5
COL.COLO4_14397 Corchorus olitorius HOM05D004660 ORTHO05D005474 9.4e-58 227.3 134 79.1
QL09p006015 Quercus lobata HOM05D004660 ORTHO05D005474 9.4e-58 227.3 147 74.8
BcaNung02008 Brassica carinata HOM05D004660 ORTHO05D005474 1.2e-57 226.9 148 77.0
C07p43100 Brassica napus HOM05D004660 ORTHO05D005474 1.2e-57 226.9 148 77.0
BolC7t44836H Brassica oleracea HOM05D004660 ORTHO05D005474 1.2e-57 226.9 148 77.0
Manes.05G195800 Manihot esculenta HOM05D004660 ORTHO05D005474 1.6e-57 226.5 146 72.6
Nitab4.5_0007121g0060 Nicotiana tabacum HOM05D004660 ORTHO05D005474 1.6e-57 226.5 146 72.6
Potri.012G004900 Populus trichocarpa HOM05D004660 ORTHO05D005474 1.6e-57 226.5 148 73.6
ClCG07G009740 Citrullus lanatus HOM05D004660 ORTHO05D005474 2.1e-57 226.1 146 71.9
CsaV3_4G009710 Cucumis sativus L. HOM05D004660 ORTHO05D005474 2.1e-57 226.1 146 71.9
Nitab4.5_0000021g0160 Nicotiana tabacum HOM05D004660 ORTHO05D005474 2.1e-57 226.1 146 72.6
Lalb_Chr10g0102981 Lupinus albus HOM05D004660 ORTHO05D005474 2.7e-57 225.7 146 72.6
CAN.G303.55 Capsicum annuum HOM05D004660 ORTHO05D005474 3.6e-57 225.3 146 73.3
LjContig00155g0012911 Lotus japonicus HOM05D004660 ORTHO05D005474 4.7e-57 224.9 146 72.6
MELO3C024844.2 Cucumis melo HOM05D004660 ORTHO05D005474 6.1e-57 224.6 146 71.2
RcHm_v2.0_Chr1g0383281 Rosa chinensis HOM05D004660 ORTHO05D005474 1.0e-56 223.8 147 72.1
Sed0002848 Sechium edule HOM05D004660 ORTHO05D005474 1.0e-56 223.8 146 70.5
C03p65490 Brassica napus HOM05D004660 ORTHO05D005474 1.4e-56 223.4 131 80.2
TWI39G0024 Tripterygium wilfordii HOM05D004660 ORTHO05D005474 1.4e-56 223.4 146 72.6
Aqoxy5G04391 Aquilegia oxysepala HOM05D004660 ORTHO05D005474 2.3e-56 222.6 148 71.6
TWI23G0412 Tripterygium wilfordii HOM05D004660 ORTHO05D005474 2.3e-56 222.6 146 72.6
Prupe.2G321900 Prunus persica HOM05D004660 ORTHO05D005474 3.0e-56 222.2 146 72.6
SalBow4G0874 Salvia bowleyana HOM05D004660 ORTHO05D005474 3.0e-56 222.2 144 72.9
SGA_v2.0_scaffold44G16872 Striga asiatica HOM05D004660 ORTHO05D005474 8.8e-56 220.7 145 73.1
CSS0012455 Camellia sinensis var. sinensis HOM05D004660 ORTHO05D005474 1.2e-55 220.3 146 71.2
DCAR_020388 Daucus carota HOM05D004660 ORTHO05D005474 1.2e-55 220.3 146 69.2
Carub.0005s1588 Capsella rubella HOM05D004660 ORTHO05D005474 2.6e-55 219.2 139 77.7
CARHR158560 Cardamine hirsuta HOM05D004660 ORTHO05D005474 2.6e-55 219.2 150 72.0
Gohir.A12G244500 Gossypium hirsutum HOM05D004660 ORTHO05D005474 2.6e-55 219.2 133 78.2
Gorai.008G263000 Gossypium raimondii HOM05D004660 ORTHO05D005474 2.6e-55 219.2 133 78.2
Oeu055424.1 Olea europaea HOM05D004660 ORTHO05D005474 2.6e-55 219.2 146 70.5
Oeu061046.1 Olea europaea HOM05D004660 ORTHO05D005474 2.6e-55 219.2 146 71.2
Gohir.D12G245400 Gossypium hirsutum HOM05D004660 ORTHO05D005474 3.4e-55 218.8 133 78.9
TPR.G27918 Trifolium pratense HOM05D004660 ORTHO05D005474 4.4e-55 218.4 145 72.4
EL10Ac3g05134 Beta vulgaris HOM05D004660 ORTHO05D005474 5.7e-55 218.0 146 67.1
Sc19g0000390 Simmondsia chinensis HOM05D004660 ORTHO05D005474 7.5e-55 217.6 146 69.2
SGA_v2.0_scaffold18G08494 Striga asiatica HOM05D004660 ORTHO05D005474 7.5e-55 217.6 144 70.1
CSS0035101 Camellia sinensis var. sinensis HOM05D004660 ORTHO05D005474 1.3e-54 216.9 146 69.9
AUR62005951 Chenopodium quinoa HOM05D004660 ORTHO05D005474 1.7e-54 216.5 146 67.1
Psat2g060520 Pisum sativum HOM05D004660 ORTHO05D005474 1.7e-54 216.5 145 72.4
Psat7g096840 Pisum sativum HOM05D004660 ORTHO05D005474 1.7e-54 216.5 145 72.4
TAR629G0239 Trochodendron aralioides HOM05D004660 ORTHO05D005474 1.7e-54 216.5 146 69.9
AUR62028114 Chenopodium quinoa HOM05D004660 ORTHO05D005474 2.2e-54 216.1 146 67.1
Ca_05550_v3 Cicer arietinum L. HOM05D004660 ORTHO05D005474 2.2e-54 216.1 144 71.5
Ah.13g071030 Amaranthus hybridus HOM05D004660 ORTHO05D005474 2.8e-54 215.7 146 67.1
Lj3P891T43 Lonicera japonica HOM05D004660 ORTHO05D005474 2.8e-54 215.7 146 71.2
MD01G1231200 Malus domestica HOM05D004660 ORTHO05D005474 4.8e-54 214.9 146 69.9
arahy.Tifrunner.gnm1.ann1.N0NSHG Arachis hypogaea HOM05D004660 ORTHO05D005474 6.3e-54 214.5 131 77.9
Medtr5g068660 Medicago truncatula HOM05D004660 ORTHO05D005474 6.3e-54 214.5 146 71.9
Peaxi162Scf01026g00258 Petunia axillaris HOM05D004660 ORTHO05D005474 8.3e-54 214.2 137 74.5
FAN03G0846 Fragaria x ananassa HOM05D004660 ORTHO05D005474 1.4e-53 213.4 141 70.9
LjContig00312_ERROPOS870357g0003416 Lotus japonicus HOM05D004660 ORTHO05D005474 1.4e-53 213.4 147 68.7
Hma1.2p1_0415F.1_g148340 Hydrangea macrophylla HOM05D004660 ORTHO05D005474 4.1e-53 211.8 148 68.2
MBI12_g37476_MAGBIO Magnolia biondii HOM05D004660 ORTHO05D005474 3.5e-52 208.8 145 66.2
Ah.13g069080 Amaranthus hybridus HOM05D004660 ORTHO05D005474 1.0e-51 207.2 146 64.4
Migut.F00969 Erythranthe guttata HOM05D004660 ORTHO05D005474 1.3e-51 206.8 147 66.7
HanXRQChr01g0002691 Helianthus annuus HOM05D004660 ORTHO05D005474 2.9e-51 205.7 153 66.7
Manes.01G050300 Manihot esculenta HOM05D004660 ORTHO05D005474 2.5e-50 202.6 126 75.4
ATR0579G143 Amborella trichopoda HOM05D004660 ORTHO05D005474 2.1e-49 199.5 147 63.3
unitig_37.g11998 Utricularia gibba HOM05D004660 ORTHO05D005474 6.1e-49 198.0 146 62.3
unitig_92.g28236 Utricularia gibba HOM05D004660 ORTHO05D005474 6.1e-49 198.0 146 62.3
arahy.Tifrunner.gnm1.ann1.0Y4BRG Arachis hypogaea HOM05D004660 ORTHO05D005474 8.0e-49 197.6 133 72.9
Zm00001eb220600 Zea mays HOM05D004660 ORTHO05D005474 3.0e-48 195.7 146 63.7
Lsat_1_v5_gn_6_117240 Lactuca sativa HOM05D004660 ORTHO05D005474 8.8e-48 194.1 139 71.9
CSS0045456 Camellia sinensis var. sinensis HOM05D004660 ORTHO05D005474 4.1e-45 185.3 114 73.7
Os10g0509100 Oryza sativa ssp. japonica HOM05D004660 ORTHO05D005474 5.4e-45 184.9 146 63.7
Zm00001eb043850 Zea mays HOM05D004660 ORTHO05D005474 5.4e-45 184.9 146 63.0
RcHm_v2.0_Chr4g0433201 Rosa chinensis HOM05D004660 ORTHO05D005474 9.1e-45 184.1 124 70.2
BcaC01g02416 Brassica carinata HOM05D004660 ORTHO05D005474 6.6e-43 177.9 101 84.2
Nn3g18745 Nelumbo nucifera HOM05D004660 ORTHO05D005474 1.1e-42 177.2 135 64.4
MD07G1303200 Malus domestica HOM05D004660 ORTHO05D005474 3.4e-39 165.6 101 78.2
Medtr3g093320 Medicago truncatula HOM05D004660 ORTHO05D005474 8.3e-38 161.0 146 59.6
SEGI_20417 Sequoiadendron giganteum HOM05D004660 ORTHO05D005474 1.8e-37 159.8 148 54.7
CSS0032658 Camellia sinensis var. sinensis HOM05D004660 ORTHO05D005474 2.3e-35 152.9 146 56.8
SalBow2G1279 Salvia bowleyana HOM05D004660 ORTHO05D005474 9.5e-34 147.5 97 75.3
Cc02_g00620 Coffea canephora HOM05D004660 ORTHO05D005474 2.1e-33 146.4 146 54.8
Mapoly0204s0014 Marchantia polymorpha HOM05D004660 ORTHO05D005474 3.6e-33 145.6 134 55.2
Aa31LG4G18040 Aethionema arabicum HOM05D004660 ORTHO05D005474 1.7e-27 126.7 127 55.1
SMO351G0342 Selaginella moellendorffii HOM05D004660 ORTHO05D005474 1.3e-22 110.5 109 47.7
Actinidia08719 Actinidia chinensis HOM05D004660 ORTHO05D005474 3.5e-20 102.4 68 73.5
AagrBONN_evm.TU.Sc2ySwM_117.1216 Anthoceros agrestis HOM05D004660 ORTHO05D005474 8.6e-19 97.8 93 48.4
DCAR_001793 Daucus carota HOM05D000001 ORTHO05D000003 3.3e-18 95.9 75 66.7
Cre07.g345800 Chlamydomonas reinhardtii HOM05D004660 ORTHO05D005474 1.1e-10 70.9 92 35.9
arahy.Tifrunner.gnm1.ann1.RHW5C7 Arachis hypogaea HOM05D017329 ORTHO05D005474 4.9e-06 55.5 37 62.2
PRCOL_00007052 Prasinoderma coloniale HOM05D004660 ORTHO05D005474 4.9e-06 55.5 72 34.7


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