Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aa31LG11G3840 Aethionema arabicum HOM05D003892 ORTHO05D004522 0.0e+00 1220.7 622 100.0
Sp5g07700 Schrenkiella parvula HOM05D003892 ORTHO05D004522 5.4e-241 837.8 637 70.6
Aa31LG2G20030 Aethionema arabicum HOM05D003892 ORTHO05D004522 7.1e-241 837.4 545 82.0
AL5G35820 Arabidopsis lyrata HOM05D003892 ORTHO05D004522 1.2e-240 836.6 636 72.0
Carub.0005s2135 Capsella rubella HOM05D003892 ORTHO05D004522 1.3e-239 833.2 632 70.4
Thhalv10010226m.g Eutrema salsugineum HOM05D003892 ORTHO05D004522 4.0e-236 821.6 612 70.9
CARHR164690 Cardamine hirsuta HOM05D003892 ORTHO05D004522 2.6e-235 818.9 635 69.9
A09p47680 Brassica napus HOM05D003892 ORTHO05D004522 1.0e-231 807.0 636 68.6
BolC8t50600H Brassica oleracea HOM05D003892 ORTHO05D004522 3.0e-231 805.4 635 68.3
AT3G54750 Arabidopsis thaliana HOM05D003892 ORTHO05D004522 2.5e-230 802.4 610 70.3
BcaB01g00163 Brassica carinata HOM05D003892 ORTHO05D004522 5.6e-230 801.2 661 65.7
BraA09t40224Z Brassica rapa HOM05D003892 ORTHO05D004522 7.3e-230 800.8 637 68.3
BcaC07g39789 Brassica carinata HOM05D003892 ORTHO05D004522 3.6e-229 798.5 635 68.0
C08p29890 Brassica napus HOM05D003892 ORTHO05D004522 5.4e-225 784.6 635 67.1
THA.LOC104824220 Tarenaya hassleriana HOM05D003892 ORTHO05D004522 3.5e-224 781.9 631 66.4
THA.LOC104825242 Tarenaya hassleriana HOM05D003892 ORTHO05D004522 6.2e-221 771.2 634 66.1
BcaB02g08458 Brassica carinata HOM05D003892 ORTHO05D004522 1.0e-210 737.3 636 65.3
BraA04t16218Z Brassica rapa HOM05D003892 ORTHO05D004522 5.1e-207 724.9 636 64.0
A04p05070 Brassica napus HOM05D003892 ORTHO05D004522 6.7e-207 724.5 636 64.3
BcaC02g09701 Brassica carinata HOM05D003892 ORTHO05D004522 3.4e-203 712.2 636 63.8
C04p37570 Brassica napus HOM05D003892 ORTHO05D004522 1.3e-202 710.3 636 63.7
Thecc.05G110400 Theobroma cacao HOM05D003892 ORTHO05D004522 7.5e-174 614.8 633 54.0
Ciclev10011278m.g Citrus clementina HOM05D003892 ORTHO05D004522 1.4e-172 610.5 636 53.6
COL.COLO4_29492 Corchorus olitorius HOM05D003892 ORTHO05D004522 4.1e-172 609.0 633 53.7
Gorai.002G233300 Gossypium raimondii HOM05D003892 ORTHO05D004522 3.5e-171 605.9 629 52.9
Gohir.D01G189600 Gossypium hirsutum HOM05D003892 ORTHO05D004522 1.1e-169 600.9 629 52.5
Gohir.A01G199500 Gossypium hirsutum HOM05D003892 ORTHO05D004522 1.0e-167 594.3 629 51.8
Duzib106G1451 Durio zibethinus HOM05D003892 ORTHO05D004522 5.2e-167 592.0 635 53.2
Potri.016G065600 Populus trichocarpa HOM05D003892 ORTHO05D004522 1.4e-164 583.9 636 53.0
Gorai.009G395500 Gossypium raimondii HOM05D003892 ORTHO05D004522 5.9e-163 578.6 633 52.4
Gohir.D04G093300 Gossypium hirsutum HOM05D003892 ORTHO05D004522 7.7e-163 578.2 633 52.3
TWI15G0645 Tripterygium wilfordii HOM05D003892 ORTHO05D004522 1.3e-162 577.4 635 52.3
Duzib128G1914 Durio zibethinus HOM05D003892 ORTHO05D004522 1.5e-161 573.9 635 52.4
Potri.006G199200 Populus trichocarpa HOM05D003892 ORTHO05D004522 1.4e-159 567.4 639 52.7
Manes.08G037500 Manihot esculenta HOM05D003892 ORTHO05D004522 1.8e-159 567.0 638 51.7
QL07p026283 Quercus lobata HOM05D003892 ORTHO05D004522 4.4e-158 562.4 639 51.0
Cfa017615 Carpinus fangiana HOM05D003892 ORTHO05D004522 5.7e-158 562.0 641 52.6
CiPaw.10G021500 Carya illinoinensis HOM05D003892 ORTHO05D004522 4.9e-157 558.9 638 51.6
Atru.chr8.1281 Acer truncatum HOM05D003892 ORTHO05D004522 5.0e-154 548.9 667 48.1
TAR633G1336 Trochodendron aralioides HOM05D003892 ORTHO05D004522 2.8e-152 543.1 643 50.1
CSS0037074 Camellia sinensis var. sinensis HOM05D003892 ORTHO05D004522 1.5e-150 537.3 644 50.5
GSVIVG01015854001 Vitis vinifera HOM05D003892 ORTHO05D004522 2.0e-147 526.9 642 48.9
MD14G1044900 Malus domestica HOM05D003892 ORTHO05D004522 1.0e-146 524.6 636 47.8
Prupe.7G089700 Prunus persica HOM05D003892 ORTHO05D004522 1.8e-143 513.8 637 48.5
Haze_20130 Corylus avellana HOM05D003892 ORTHO05D004522 6.8e-143 511.9 699 45.6
Hma1.2p1_0304F.1_g119340 Hydrangea macrophylla HOM05D003892 ORTHO05D004522 4.4e-142 509.2 643 48.8
Lj1C1061G1 Lonicera japonica HOM05D003892 ORTHO05D004522 7.5e-142 508.4 646 48.0
Eucgr.A02543 Eucalyptus grandis HOM05D003892 ORTHO05D004522 9.8e-142 508.1 650 46.9
MD12G1046200 Malus domestica HOM05D003892 ORTHO05D004522 1.4e-140 504.2 624 47.1
Nn2g14423 Nelumbo nucifera HOM05D003892 ORTHO05D004522 2.0e-139 500.4 650 49.2
Sabra16G0067100 Salix brachista HOM05D003892 ORTHO05D004522 1.7e-138 497.3 636 47.8
CANSAT64G1569 Cannabis sativa HOM05D003892 ORTHO05D004522 5.0e-138 495.7 635 48.3
Lalb_Chr01g0017711 Lupinus albus HOM05D003892 ORTHO05D004522 5.0e-138 495.7 658 46.0
Sed0022353 Sechium edule HOM05D003892 ORTHO05D004522 6.6e-138 495.4 638 47.6
Lj1g0007585 Lotus japonicus HOM05D003892 ORTHO05D004522 9.5e-137 491.5 640 47.7
Glyma.03G205000 Glycine max HOM05D003892 ORTHO05D004522 1.4e-135 487.6 637 48.2
Ca_09081_v3 Cicer arietinum L. HOM05D003892 ORTHO05D004522 4.0e-135 486.1 641 46.8
PGR004G2391 Punica granatum HOM05D003892 ORTHO05D004522 4.0e-135 486.1 635 46.3
Glyma.19G202400 Glycine max HOM05D003892 ORTHO05D004522 5.2e-135 485.7 638 47.6
arahy.Tifrunner.gnm1.ann1.IGZ3F9 Arachis hypogaea HOM05D003892 ORTHO05D004522 2.6e-134 483.4 639 45.4
ClCG10G017850 Citrullus lanatus HOM05D003892 ORTHO05D004522 2.6e-134 483.4 644 46.7
arahy.Tifrunner.gnm1.ann1.H4389H Arachis hypogaea HOM05D003892 ORTHO05D004522 2.9e-133 479.9 674 46.6
Lalb_Chr25g0287841 Lupinus albus HOM05D003892 ORTHO05D004522 2.9e-133 479.9 624 45.2
AUR62038416 Chenopodium quinoa HOM05D003892 ORTHO05D004522 4.9e-133 479.2 640 45.8
Psat3g027080 Pisum sativum HOM05D003892 ORTHO05D004522 4.9e-133 479.2 639 46.5
DCAR_013462 Daucus carota HOM05D003892 ORTHO05D004522 6.4e-133 478.8 641 45.2
TWI81G0594 Tripterygium wilfordii HOM05D003892 ORTHO05D004522 1.9e-132 477.2 503 53.3
TPR.G34451 Trifolium pratense HOM05D003892 ORTHO05D004522 4.1e-132 476.1 635 46.5
EL10Ac5g11803 Beta vulgaris HOM05D003892 ORTHO05D004522 5.4e-132 475.7 636 46.7
Medtr7g106900 Medicago truncatula HOM05D003892 ORTHO05D004522 1.6e-131 474.2 637 45.7
Sabra06G0153100 Salix brachista HOM05D003892 ORTHO05D004522 2.1e-131 473.8 639 46.8
AUR62036307 Chenopodium quinoa HOM05D003892 ORTHO05D004522 2.7e-131 473.4 642 45.5
Sc22g0003030 Simmondsia chinensis HOM05D003892 ORTHO05D004522 6.0e-131 472.2 636 46.4
Phvul.001G198500 Phaseolus vulgaris HOM05D003892 ORTHO05D004522 1.3e-130 471.1 635 46.1
PGSC0003DMG400021344 Solanum tuberosum HOM05D003892 ORTHO05D004522 1.7e-130 470.7 640 46.4
FAN05G2923 Fragaria x ananassa HOM05D003892 ORTHO05D004522 3.9e-130 469.5 636 44.8
RcHm_v2.0_Chr3g0477411 Rosa chinensis HOM05D003892 ORTHO05D004522 1.1e-129 468.0 638 45.5
Sopen01g002690 Solanum pennellii HOM05D003892 ORTHO05D004522 1.1e-129 468.0 641 45.9
Oeu058130.1 Olea europaea HOM05D003892 ORTHO05D004522 1.9e-129 467.2 690 42.6
Solyc01g006700.3 Solanum lycopersicum HOM05D003892 ORTHO05D004522 2.5e-129 466.8 638 45.9
Actinidia03963 Actinidia chinensis HOM05D003892 ORTHO05D004522 3.3e-129 466.5 668 46.0
HanXRQChr13g0398781 Helianthus annuus HOM05D003892 ORTHO05D004522 5.6e-129 465.7 634 45.7
Rhsim03G0058500 Rhododendron simsii HOM05D003892 ORTHO05D004522 5.6e-129 465.7 653 45.0
Hund10790 Selenicereus undatus HOM05D003892 ORTHO05D004522 9.5e-129 464.9 649 45.8
CsaV3_3G038440 Cucumis sativus L. HOM05D003892 ORTHO05D004522 3.6e-128 463.0 648 45.8
arahy.Tifrunner.gnm1.ann1.L9LT45 Arachis hypogaea HOM05D003892 ORTHO05D004522 8.1e-128 461.8 673 43.4
HanXRQChr02g0052851 Helianthus annuus HOM05D003892 ORTHO05D004522 1.4e-127 461.1 608 46.2
MELO3C009588.2 Cucumis melo HOM05D003892 ORTHO05D004522 4.0e-127 459.5 645 45.0
CAN.G388.52 Capsicum annuum HOM05D003892 ORTHO05D004522 6.8e-127 458.8 647 45.4
VMungo1383G0340 Vigna mungo HOM05D003892 ORTHO05D004522 2.0e-126 457.2 638 45.5
FAN05G3327 Fragaria x ananassa HOM05D003892 ORTHO05D004522 4.9e-125 452.6 667 42.7
Dinv25081 Davidia involucrata HOM05D003892 ORTHO05D004522 1.4e-124 451.1 510 53.5
FAN02G1525 Fragaria x ananassa HOM05D003892 ORTHO05D004522 1.9e-124 450.7 636 43.9
PSO832G2838 Papaver somniferum HOM05D003892 ORTHO05D004522 1.6e-123 447.6 653 44.0
FAN14G4612 Fragaria x ananassa HOM05D003892 ORTHO05D004522 2.7e-123 446.8 664 42.2
ECA233G3816 Erigeron canadensis HOM05D003892 ORTHO05D004522 1.3e-122 444.5 628 45.1
PSO210G1032 Papaver somniferum HOM05D003892 ORTHO05D004522 1.3e-122 444.5 655 44.0
Cc06_g06980 Coffea canephora HOM05D003892 ORTHO05D004522 1.5e-121 441.0 613 44.2
Lsat_1_v5_gn_6_34240 Lactuca sativa HOM05D003892 ORTHO05D004522 1.5e-121 441.0 617 44.6
Lj6g0017825 Lotus japonicus HOM05D003892 ORTHO05D004522 3.3e-121 439.9 614 45.8
Aqoxy2G02397 Aquilegia oxysepala HOM05D003892 ORTHO05D004522 2.8e-120 436.8 650 42.6
SalBow1G7123 Salvia bowleyana HOM05D003892 ORTHO05D004522 8.1e-120 435.3 622 43.7
Aqoxy1G00583 Aquilegia oxysepala HOM05D003892 ORTHO05D004522 1.4e-119 434.5 653 44.0
SalBow1G1519 Salvia bowleyana HOM05D003892 ORTHO05D004522 2.4e-119 433.7 617 43.4
MSTRG.5909 Avicennia marina HOM05D003892 ORTHO05D004522 2.0e-118 430.6 625 44.6
SGA_v2.0_scaffold112G31566 Striga asiatica HOM05D003892 ORTHO05D004522 5.8e-118 429.1 632 44.6
arahy.Tifrunner.gnm1.ann1.P5VIE6 Arachis hypogaea HOM05D003892 ORTHO05D004522 1.7e-117 427.6 644 44.4
Ah.12g059580 Amaranthus hybridus HOM05D003892 ORTHO05D004522 3.8e-117 426.4 638 43.1
Migut.J00728 Erythranthe guttata HOM05D003892 ORTHO05D004522 1.1e-116 424.9 645 42.0
Cpa.g.sc222.13 Carica papaya HOM05D003892 ORTHO05D004522 9.3e-116 421.8 572 44.9
CDE07G1113 Ceratophyllum demersum HOM05D003892 ORTHO05D004522 1.0e-114 418.3 623 44.5
FvH4_6g21040 Fragaria vesca HOM05D003892 ORTHO05D004522 2.5e-113 413.7 563 44.4
HPP92_013933 Vanilla planifolia HOM05D003892 ORTHO05D004522 4.8e-112 409.5 619 41.5
SGA_v2.0_scaffold31G12827 Striga asiatica HOM05D003892 ORTHO05D004522 6.9e-111 405.6 629 42.4
MBI11_g43834_MAGBIO Magnolia biondii HOM05D003892 ORTHO05D004522 1.5e-110 404.4 649 42.2
Peaxi162Scf00751g00063 Petunia axillaris HOM05D003892 ORTHO05D004522 7.6e-110 402.1 610 43.1
ECA238G3852 Erigeron canadensis HOM05D003892 ORTHO05D004522 9.9e-110 401.7 620 41.1
Peaxi162Scf00210g00093 Petunia axillaris HOM05D003892 ORTHO05D004522 9.9e-110 401.7 610 43.1
Nitab4.5_0003430g0010 Nicotiana tabacum HOM05D003892 ORTHO05D004522 1.1e-108 398.3 640 41.1
ATR0580G241 Amborella trichopoda HOM05D003892 ORTHO05D004522 2.1e-107 394.0 609 40.9
TAR636G2427 Trochodendron aralioides HOM05D003892 ORTHO05D004522 2.3e-106 390.6 393 53.2
Dinv11899 Davidia involucrata HOM05D003892 ORTHO05D004522 2.4e-103 380.6 410 53.7
Sed0022528 Sechium edule HOM05D003892 ORTHO05D004522 9.9e-102 375.2 646 40.9
Lsat_1_v5_gn_2_121661 Lactuca sativa HOM05D003892 ORTHO05D004522 8.4e-101 372.1 599 40.9
Os12g0621700 Oryza sativa ssp. japonica HOM05D003892 ORTHO05D004522 1.0e-98 365.2 622 39.2
Zm00001eb032200 Zea mays HOM05D003892 ORTHO05D004522 4.5e-94 349.7 625 38.2
MBI11_g33439_MAGBIO Magnolia biondii HOM05D003892 ORTHO05D004522 8.2e-88 328.9 334 54.8
Gohir.A04G055942 Gossypium hirsutum HOM05D003892 ORTHO05D004522 1.8e-87 327.8 322 54.3
Medtr7g029625 Medicago truncatula HOM05D003892 ORTHO05D004522 3.6e-83 313.5 636 37.6
CSS0004478 Camellia sinensis var. sinensis HOM05D003892 ORTHO05D004522 2.1e-75 287.7 386 48.4
Nitab4.5_0000300g0030 Nicotiana tabacum HOM05D003892 ORTHO05D004522 2.7e-75 287.3 501 40.5
Gohir.D07G211433 Gossypium hirsutum HOM05D003892 ORTHO05D004522 5.1e-74 283.1 413 45.3
GSVIVG01020969001 Vitis vinifera HOM05D003892 ORTHO05D004522 6.7e-74 282.7 378 46.3
Sed0005279 Sechium edule HOM05D000521 ORTHO05D004522 1.5e-70 271.6 403 44.9
Actinidia37779 Actinidia chinensis HOM05D003892 ORTHO05D004522 5.9e-70 269.6 254 54.7
Pp3c26_8020 Physcomitrium patens HOM05D003892 ORTHO05D004522 1.2e-67 261.9 619 33.0
SMO351G0585 Selaginella moellendorffii HOM05D003892 ORTHO05D004522 1.3e-64 251.9 604 33.8
Pp3c4_31220 Physcomitrium patens HOM05D003892 ORTHO05D004522 3.8e-61 240.4 599 33.1
AagrBONN_evm.TU.Sc2ySwM_228.3493 Anthoceros agrestis HOM05D003892 ORTHO05D004522 2.6e-57 227.6 363 38.6
SHI28320 Sapria himalayana HOM05D003892 ORTHO05D004522 1.7e-56 224.9 578 30.3
arahy.Tifrunner.gnm1.ann1.75SLRD Arachis hypogaea HOM05D003892 ORTHO05D004522 2.2e-56 224.6 283 47.7
vmacro07513 Vaccinium macrocarpon HOM05D003892 ORTHO05D004522 2.7e-54 217.6 389 39.1
Mapoly0011s0047 Marchantia polymorpha HOM05D003892 ORTHO05D004522 9.4e-52 209.1 619 29.7
Gohir.A04G055921 Gossypium hirsutum HOM05D003892 ORTHO05D004522 1.0e-50 205.7 256 50.4
unitig_749.g14208 Utricularia gibba HOM05D003892 ORTHO05D004522 1.2e-49 202.2 228 46.9
unitig_26.g9151 Utricularia gibba HOM05D003892 ORTHO05D004522 2.6e-49 201.1 235 45.5
Cfa017831 Carpinus fangiana HOM05D003892 ORTHO05D004522 7.2e-44 183.0 204 50.5
Nitab4.5_0000429g0010 Nicotiana tabacum HOM05D003892 ORTHO05D004522 6.1e-43 179.9 326 39.6
CSS0016552 Camellia sinensis var. sinensis HOM05D003892 ORTHO05D004522 1.9e-36 158.3 181 49.2
arahy.Tifrunner.gnm1.ann1.R2HNIM Arachis hypogaea HOM05D003892 ORTHO05D004522 7.3e-36 156.4 302 34.8
arahy.Tifrunner.gnm1.ann1.C1NY7P Arachis hypogaea HOM05D003892 ORTHO05D004522 2.3e-34 151.4 316 35.8
arahy.Tifrunner.gnm1.ann1.84GXZP Arachis hypogaea HOM05D003892 ORTHO05D004522 8.9e-34 149.4 327 34.6
vmacro07512 Vaccinium macrocarpon HOM05D003892 ORTHO05D004522 1.9e-31 141.7 253 41.9
GSVIVG01020973001 Vitis vinifera HOM05D003892 ORTHO05D004522 4.6e-30 137.1 114 57.0
CBR_g20103 Chara braunii HOM05D003892 ORTHO05D004522 2.5e-28 131.3 358 30.4
GSVIVG01020966001 Vitis vinifera HOM05D003892 ORTHO05D004522 4.3e-28 130.6 95 64.2
Aa31LG2G20020 Aethionema arabicum HOM05D003892 ORTHO05D004522 8.9e-26 122.9 77 88.3
HPP92_012152 Vanilla planifolia HOM05D003892 ORTHO05D004522 6.4e-24 116.7 120 52.5
Nitab4.5_0003430g0040 Nicotiana tabacum HOM05D003892 ORTHO05D004522 2.1e-22 111.7 221 38.0
arahy.Tifrunner.gnm1.ann1.Z2YKN3 Arachis hypogaea HOM05D003892 ORTHO05D004522 1.6e-19 102.1 220 35.0
Aqoxy2G02169 Aquilegia oxysepala HOM05D001785 ORTHO05D001933 1.8e-18 98.6 276 34.1
arahy.Tifrunner.gnm1.ann1.U7JCXR Arachis hypogaea HOM05D003892 ORTHO05D004522 2.3e-18 98.2 195 39.0
TAR636G1189 Trochodendron aralioides HOM05D003892 ORTHO05D004522 2.3e-18 98.2 174 43.1
SEGI_30208 Sequoiadendron giganteum HOM05D003892 ORTHO05D004522 1.9e-15 88.6 82 53.7
SEGI_25684 Sequoiadendron giganteum HOM05D003892 ORTHO05D004522 2.4e-15 88.2 240 34.2
Cre03.g197600 Chlamydomonas reinhardtii HOM05D003892 ORTHO05D004522 7.8e-14 83.2 295 27.5
Actinidia37778 Actinidia chinensis HOM05D003892 ORTHO05D004522 1.0e-13 82.8 241 34.0
ATR1154G016 Amborella trichopoda HOM05D003892 ORTHO05D004522 1.1e-10 72.8 111 36.0
Sabra17G0067200 Salix brachista HOM05D003892 ORTHO05D004522 4.4e-09 67.4 90 42.2
arahy.Tifrunner.gnm1.ann1.RB1WVK Arachis hypogaea HOM05D003892 ORTHO05D004522 7.6e-09 66.6 217 31.3


User provided reference genes

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