Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aa31LG11G3790 Aethionema arabicum HOM05D009821 ORTHO05D005964 0.0e+00 1549.3 797 100.0
Carub.0005s1582 Capsella rubella HOM05D009821 ORTHO05D005964 6.7e-127 459.1 964 38.8
CARHR158490 Cardamine hirsuta HOM05D009821 ORTHO05D005964 5.0e-122 443.0 951 38.3
AL5G29280 Arabidopsis lyrata HOM05D009821 ORTHO05D005964 1.9e-113 414.5 948 37.0
BcaB02g09591 Brassica carinata HOM05D009821 ORTHO05D005964 2.0e-110 404.4 921 37.5
AT3G49490 Arabidopsis thaliana HOM05D009821 ORTHO05D005964 5.3e-108 396.4 964 35.6
A06p28240 Brassica napus HOM05D009821 ORTHO05D005964 8.3e-101 372.5 925 36.9
BraA06t25767Z Brassica rapa HOM05D009821 ORTHO05D005964 8.3e-101 372.5 925 36.9
THA.LOC104799674 Tarenaya hassleriana HOM05D009821 ORTHO05D005964 5.5e-97 359.8 1042 34.3
BcaB01g00702 Brassica carinata HOM05D009821 ORTHO05D005964 6.8e-95 352.8 893 36.6
Sp5g12600 Schrenkiella parvula HOM05D009821 ORTHO05D005964 8.8e-95 352.4 958 35.0
BcaB05g23119 Brassica carinata HOM05D009821 ORTHO05D005964 5.0e-90 336.7 668 39.5
C03p65560 Brassica napus HOM05D009821 ORTHO05D005964 2.5e-89 334.3 770 37.0
BcaC01g02410 Brassica carinata HOM05D009821 ORTHO05D005964 1.2e-88 332.0 770 37.0
BolC3t18811H Brassica oleracea HOM05D009821 ORTHO05D005964 4.0e-87 327.0 772 36.7
A01p24720 Brassica napus HOM05D009821 ORTHO05D005964 1.3e-82 312.0 820 35.1
BraA01t02384Z Brassica rapa HOM05D009821 ORTHO05D005964 1.3e-82 312.0 820 35.1
BolC8t50069H Brassica oleracea HOM05D009821 ORTHO05D005964 1.5e-81 308.5 848 35.4
C08p24510 Brassica napus HOM05D009821 ORTHO05D005964 3.3e-81 307.4 848 35.3
A06p18270 Brassica napus HOM05D009821 ORTHO05D005964 7.5e-78 296.2 859 35.2
BraA06t24910Z Brassica rapa HOM05D009821 ORTHO05D005964 2.2e-77 294.7 865 34.8
C01p30840 Brassica napus HOM05D009821 ORTHO05D005964 2.0e-75 288.1 894 32.4
BcaC07g39413 Brassica carinata HOM05D009821 ORTHO05D005964 8.6e-74 282.7 840 33.5
BolC1t03016H Brassica oleracea HOM05D009821 ORTHO05D005964 1.9e-68 265.0 767 33.9
BcaC09g49952 Brassica carinata HOM05D009821 ORTHO05D005964 1.9e-65 255.0 854 32.6
Gohir.D08G117100 Gossypium hirsutum HOM05D006657 ORTHO05D005964 9.0e-23 113.2 461 28.4
Gorai.004G125800 Gossypium raimondii HOM05D006657 ORTHO05D005964 4.5e-22 110.9 461 28.2
THA.LOC104803312 Tarenaya hassleriana HOM05D009821 ORTHO05D005964 5.0e-21 107.5 247 38.5
Duzib084G0166 Durio zibethinus HOM05D006657 ORTHO05D005964 6.5e-21 107.1 463 27.0
Duzib068G0081 Durio zibethinus HOM05D006657 ORTHO05D005964 1.9e-20 105.5 256 34.0
Duzib205G0597 Durio zibethinus HOM05D006657 ORTHO05D005964 1.9e-20 105.5 278 31.7
COL.COLO4_14382 Corchorus olitorius HOM05D006657 ORTHO05D005964 5.1e-18 97.4 304 32.2
Atru.chr12.2479 Acer truncatum HOM05D006657 ORTHO05D005964 6.7e-18 97.1 311 29.6
Dinv17292 Davidia involucrata HOM05D006657 ORTHO05D005964 7.4e-17 93.6 299 30.4
TAR374G0213 Trochodendron aralioides HOM05D006657 ORTHO05D005964 9.7e-17 93.2 224 33.5
FvH4_7g33030 Fragaria vesca HOM05D006657 ORTHO05D005964 1.3e-16 92.8 265 29.8
Thecc.03G210000 Theobroma cacao HOM05D006657 ORTHO05D005964 1.3e-16 92.8 505 25.7
Prupe.2G320100 Prunus persica HOM05D006657 ORTHO05D005964 1.6e-16 92.4 188 35.6
FAN10G1617 Fragaria x ananassa HOM05D006657 ORTHO05D005964 2.2e-16 92.0 265 29.8
FAN10G2847 Fragaria x ananassa HOM05D006657 ORTHO05D005964 2.2e-16 92.0 238 29.8
Glyma.04G227100 Glycine max HOM05D006657 ORTHO05D005964 2.2e-16 92.0 462 24.2
Dinv29204 Davidia involucrata HOM05D006657 ORTHO05D005964 1.4e-15 89.4 303 30.0
FAN01G2018 Fragaria x ananassa HOM05D006657 ORTHO05D005964 5.3e-15 87.4 238 31.1
Potri.015G003700 Populus trichocarpa HOM05D006657 ORTHO05D005964 6.9e-15 87.0 359 28.4
FAN03G1526 Fragaria x ananassa HOM05D006657 ORTHO05D005964 9.1e-15 86.7 364 27.5
Actinidia08706 Actinidia chinensis HOM05D006657 ORTHO05D005964 1.2e-14 86.3 239 28.9
Sabra12G0008600 Salix brachista HOM05D006657 ORTHO05D005964 1.5e-14 85.9 289 29.8
CANSAT21G0900 Cannabis sativa HOM05D006657 ORTHO05D005964 2.6e-14 85.1 484 23.3
TAR375G0071 Trochodendron aralioides HOM05D006657 ORTHO05D005964 2.6e-14 85.1 282 30.1
Sabra12G0004100 Salix brachista HOM05D006657 ORTHO05D005964 3.4e-14 84.7 306 29.4
CSS0010102 Camellia sinensis var. sinensis HOM05D006657 ORTHO05D005964 4.5e-14 84.3 233 28.8
Actinidia34275 Actinidia chinensis HOM05D006657 ORTHO05D005964 5.9e-14 84.0 256 28.1
Lalb_Chr23g0272001 Lupinus albus HOM05D006657 ORTHO05D005964 5.9e-14 84.0 479 24.6
arahy.Tifrunner.gnm1.ann1.UMZ78C Arachis hypogaea HOM05D006657 ORTHO05D005964 7.7e-14 83.6 288 28.5
Eucgr.K00044 Eucalyptus grandis HOM05D006657 ORTHO05D005964 1.0e-13 83.2 267 28.1
RcHm_v2.0_Chr1g0383041 Rosa chinensis HOM05D006657 ORTHO05D005964 1.0e-13 83.2 312 25.6
Solyc03g080140.3 Solanum lycopersicum HOM05D006657 ORTHO05D005964 1.0e-13 83.2 239 30.1
VMungo1309G0886 Vigna mungo HOM05D006657 ORTHO05D005964 1.3e-13 82.8 302 29.8
Manes.01G044100 Manihot esculenta HOM05D006657 ORTHO05D005964 1.7e-13 82.4 361 25.8
vmacro06453 Vaccinium macrocarpon HOM05D006657 ORTHO05D005964 1.7e-13 82.4 271 28.4
Peaxi162Scf00912g00114 Petunia axillaris HOM05D006657 ORTHO05D005964 2.9e-13 81.6 204 33.8
Sopen03g021870 Solanum pennellii HOM05D006657 ORTHO05D005964 2.9e-13 81.6 240 30.4
SGA_v2.0_scaffold44G16853 Striga asiatica HOM05D006657 ORTHO05D005964 2.9e-13 81.6 197 32.5
Phvul.009G038600 Phaseolus vulgaris HOM05D006657 ORTHO05D005964 5.0e-13 80.9 384 25.5
Potri.012G007000 Populus trichocarpa HOM05D006657 ORTHO05D005964 5.0e-13 80.9 402 26.4
MD07G1301500 Malus domestica HOM05D006657 ORTHO05D005964 8.5e-13 80.1 229 29.7
Sabra15G0002400 Salix brachista HOM05D006657 ORTHO05D005964 8.5e-13 80.1 357 28.0
Eucgr.A00967 Eucalyptus grandis HOM05D006657 ORTHO05D005964 1.1e-12 79.7 194 36.6
Psat5g071280 Pisum sativum HOM05D006657 ORTHO05D005964 1.1e-12 79.7 341 27.0
Sed0019147 Sechium edule HOM05D006657 ORTHO05D005964 1.1e-12 79.7 385 26.0
PGSC0003DMG400000558 Solanum tuberosum HOM05D006657 ORTHO05D005964 1.1e-12 79.7 266 27.8
SalBow4G2342 Salvia bowleyana HOM05D006657 ORTHO05D005964 1.9e-12 79.0 194 37.6
Haze_00307 Corylus avellana HOM05D006657 ORTHO05D005964 2.5e-12 78.6 206 30.6
MD01G1229500 Malus domestica HOM05D006657 ORTHO05D005964 2.5e-12 78.6 176 33.0
SalBow4G2934 Salvia bowleyana HOM05D006657 ORTHO05D005964 2.5e-12 78.6 194 37.6
Lj1g0002697 Lotus japonicus HOM05D006657 ORTHO05D005964 7.2e-12 77.0 477 23.7
Rhsim09G0210400 Rhododendron simsii HOM05D006657 ORTHO05D005964 7.2e-12 77.0 304 25.7
arahy.Tifrunner.gnm1.ann1.UB23H3 Arachis hypogaea HOM05D006657 ORTHO05D005964 9.4e-12 76.6 283 27.2
Glyma.06G138000 Glycine max HOM05D006657 ORTHO05D005964 9.4e-12 76.6 405 25.4
Rhsim03G0216600 Rhododendron simsii HOM05D006657 ORTHO05D005964 1.2e-11 76.3 266 27.4
vmacro10166 Vaccinium macrocarpon HOM05D006657 ORTHO05D005964 1.2e-11 76.3 201 28.9
CsaV3_4G008600 Cucumis sativus L. HOM05D006657 ORTHO05D005964 1.6e-11 75.9 379 25.3
CAN.G303.40 Capsicum annuum HOM05D006657 ORTHO05D005964 2.1e-11 75.5 268 27.2
CiPaw.06G040100 Carya illinoinensis HOM05D006657 ORTHO05D005964 2.1e-11 75.5 198 28.8
CiPaw.05G206100 Carya illinoinensis HOM05D006657 ORTHO05D005964 2.7e-11 75.1 229 28.4
SGA_v2.0_scaffold18G08476 Striga asiatica HOM05D006657 ORTHO05D005964 6.1e-11 73.9 188 29.8
PGR042G1854 Punica granatum HOM05D006657 ORTHO05D005964 1.0e-10 73.2 84 45.2
Cpa.g.sc3.164 Carica papaya HOM05D006657 ORTHO05D005964 1.4e-10 72.8 60 58.3
Cc07_g20200 Coffea canephora HOM05D006657 ORTHO05D005964 1.4e-10 72.8 403 26.3
QL09p006779 Quercus lobata HOM05D006657 ORTHO05D005964 1.4e-10 72.8 332 26.8
ECA233G2144 Erigeron canadensis HOM05D006657 ORTHO05D005964 2.3e-10 72.0 339 24.5
TWI14G0251 Tripterygium wilfordii HOM05D006657 ORTHO05D005964 3.0e-10 71.6 191 29.8
Lsat_1_v5_gn_2_134840 Lactuca sativa HOM05D006657 ORTHO05D005964 6.7e-10 70.5 184 28.8
Cpa.g.sc9.388 Carica papaya HOM05D006657 ORTHO05D005964 8.8e-10 70.1 179 30.2
Oeu055400.1 Olea europaea HOM05D006657 ORTHO05D005964 8.8e-10 70.1 201 29.9
Ciclev10018632m.g Citrus clementina HOM05D006657 ORTHO05D005964 1.1e-09 69.7 487 23.2
Cfa016147 Carpinus fangiana HOM05D006657 ORTHO05D005964 2.0e-09 68.9 561 23.4
Ca_16789_v3 Cicer arietinum L. HOM05D006657 ORTHO05D005964 2.0e-09 68.9 266 25.6
Ca_16805_v3 Cicer arietinum L. HOM05D006657 ORTHO05D005964 2.0e-09 68.9 266 25.6
Hund23980 Selenicereus undatus HOM05D006657 ORTHO05D005964 3.3e-09 68.2 200 27.0
Lalb_Chr11g0067471 Lupinus albus HOM05D006657 ORTHO05D005964 4.4e-09 67.8 473 23.9
Nn1g05264 Nelumbo nucifera HOM05D006657 ORTHO05D005964 4.4e-09 67.8 533 23.1
unitig_0.g2439 Utricularia gibba HOM05D006657 ORTHO05D005964 4.4e-09 67.8 178 29.8
Aqoxy5G04358 Aquilegia oxysepala HOM05D006657 ORTHO05D005964 5.7e-09 67.4 199 32.7
DCAR_008990 Daucus carota HOM05D006657 ORTHO05D005964 5.7e-09 67.4 188 28.7
GSVIVG01038660001 Vitis vinifera HOM05D006657 ORTHO05D005964 5.7e-09 67.4 473 23.3
HanXRQChr08g0226001 Helianthus annuus HOM05D006657 ORTHO05D005964 7.4e-09 67.0 326 25.5
Nitab4.5_0006821g0010 Nicotiana tabacum HOM05D006657 ORTHO05D005964 1.7e-08 65.9 290 26.2
DCAR_020382 Daucus carota HOM05D006657 ORTHO05D005964 2.8e-08 65.1 336 23.8
TAR629G3494 Trochodendron aralioides HOM05D006657 ORTHO05D005964 3.7e-08 64.7 165 32.1
MSTRG.26967 Avicennia marina HOM05D006657 ORTHO05D005964 1.8e-07 62.4 246 26.0
Migut.F00140 Erythranthe guttata HOM05D006657 ORTHO05D005964 3.1e-07 61.6 240 25.4
ATR0579G071 Amborella trichopoda HOM05D006657 ORTHO05D005964 4.1e-07 61.2 283 27.6
Medtr3g093000 Medicago truncatula HOM05D006657 ORTHO05D005964 4.1e-07 61.2 120 35.8
Potri.001G452300 Populus trichocarpa HOM05D011672 ORTHO05D011012 5.3e-07 60.8 202 27.7
Nitab4.5_0000021g0080 Nicotiana tabacum HOM05D006657 ORTHO05D005964 6.9e-07 60.5 290 24.1
EL10Ac3g05155 Beta vulgaris HOM05D006657 ORTHO05D005964 9.1e-07 60.1 218 28.0
Cc00_g14340 Coffea canephora HOM05D006657 ORTHO05D005964 3.4e-06 58.2 371 25.1
Sabra16G0305400 Salix brachista HOM05D011672 ORTHO05D011012 5.9e-06 57.4 188 29.3
Sc13g0010540 Simmondsia chinensis HOM05D006657 ORTHO05D005964 5.9e-06 57.4 593 22.3
AUR62028098 Chenopodium quinoa HOM05D006657 ORTHO05D005964 7.7e-06 57.0 191 26.2
QL02p027097 Quercus lobata HOM05D013249 ORTHO05D011012 7.7e-06 57.0 180 26.1


User provided reference genes

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