Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aa31LG11G2230 Aethionema arabicum HOM05D007909 ORTHO05D000743 6.9e-216 753.8 419 100.0
AL8G37760 Arabidopsis lyrata HOM05D007909 ORTHO05D000743 4.6e-119 432.2 385 60.3
AT5G61120 Arabidopsis thaliana HOM05D007909 ORTHO05D000743 2.4e-115 419.9 381 59.1
Carub.0008s2179 Capsella rubella HOM05D007909 ORTHO05D000743 3.1e-115 419.5 379 60.4
Sp2g24370 Schrenkiella parvula HOM05D007909 ORTHO05D000743 7.6e-114 414.8 363 60.3
Thhalv10004389m.g Eutrema salsugineum HOM05D007909 ORTHO05D000743 4.2e-112 409.1 364 59.6
A03p46770 Brassica napus HOM05D007909 ORTHO05D010605 2.0e-106 390.2 379 57.5
BraA03t13799Z Brassica rapa HOM05D007909 ORTHO05D010605 2.0e-106 390.2 379 57.5
C07p44810 Brassica napus HOM05D007909 ORTHO05D010605 2.9e-105 386.3 380 57.4
BolC7t45005H Brassica oleracea HOM05D007909 ORTHO05D000743 3.8e-105 386.0 380 57.6
CARHR274810 Cardamine hirsuta HOM05D007909 ORTHO05D000743 1.1e-96 357.8 386 51.3
THA.LOC104801226 Tarenaya hassleriana HOM05D007909 ORTHO05D000743 3.3e-77 293.1 361 46.3
BcaC06g33178 Brassica carinata HOM05D007909 ORTHO05D010605 2.8e-76 290.0 378 48.4
A03p46760 Brassica napus HOM05D007909 ORTHO05D000743 7.5e-61 238.8 419 40.3
AL8G37730 Arabidopsis lyrata HOM05D007909 ORTHO05D000743 9.8e-61 238.4 458 37.8
C07p44800 Brassica napus HOM05D007909 ORTHO05D000743 2.2e-60 237.3 395 42.5
BolC7t45004H Brassica oleracea HOM05D007909 ORTHO05D000743 2.2e-60 237.3 395 42.5
BcaC06g33179 Brassica carinata HOM05D007909 ORTHO05D000743 2.8e-60 236.9 395 42.3
Thhalv10005634m.g Eutrema salsugineum HOM05D007909 ORTHO05D000743 8.3e-60 235.3 398 40.2
BraA03t13798Z Brassica rapa HOM05D007909 ORTHO05D000743 1.8e-59 234.2 419 40.6
Aa31LG11G2240 Aethionema arabicum HOM05D007909 ORTHO05D000743 1.2e-58 231.5 353 43.3
AT5G61090 Arabidopsis thaliana HOM05D007909 ORTHO05D000743 1.2e-58 231.5 457 36.5
CARHR274780 Cardamine hirsuta HOM05D007909 ORTHO05D000743 2.9e-52 210.3 415 37.8
A02p41390 Brassica napus HOM05D007909 ORTHO05D000743 1.3e-49 201.4 454 36.1
BraA02t09081Z Brassica rapa HOM05D007909 ORTHO05D000743 3.9e-49 199.9 454 35.9
BolC2t12182H Brassica oleracea HOM05D007909 ORTHO05D000743 3.6e-47 193.4 205 52.7
BcaB07g34220 Brassica carinata HOM05D007909 ORTHO05D000743 1.8e-46 191.0 274 43.8
C02p61340 Brassica napus HOM05D007909 ORTHO05D000743 2.3e-46 190.7 205 52.2
BcaC03g18074 Brassica carinata HOM05D007909 ORTHO05D000743 7.0e-43 179.1 454 33.7
CSS0005519 Camellia sinensis var. sinensis HOM05D001093 ORTHO05D000743 1.6e-26 124.8 367 31.9
Potri.014G040100 Populus trichocarpa HOM05D007909 ORTHO05D000743 5.8e-21 106.3 409 28.9
arahy.Tifrunner.gnm1.ann1.7R0RVH Arachis hypogaea HOM05D001093 ORTHO05D000743 8.4e-20 102.4 353 26.1
Lj1g0000797 Lotus japonicus HOM05D007909 ORTHO05D000743 1.1e-19 102.1 390 26.9
Sabra14G0029200 Salix brachista HOM05D007909 ORTHO05D000743 1.9e-19 101.3 443 27.5
Dinv17406 Davidia involucrata HOM05D001093 ORTHO05D000743 5.4e-19 99.8 383 26.1
arahy.Tifrunner.gnm1.ann1.ER6SHV Arachis hypogaea HOM05D008195 ORTHO05D000743 3.5e-18 97.1 384 25.8
FAN17G0179 Fragaria x ananassa HOM05D000009 ORTHO05D000008 1.7e-17 94.7 421 27.1
Psat0s231g0040 Pisum sativum HOM05D001093 ORTHO05D000743 2.3e-17 94.4 404 26.0
Manes.06G085200 Manihot esculenta HOM05D007909 ORTHO05D010605 1.9e-16 91.3 448 24.6
Prupe.5G204200 Prunus persica HOM05D007909 ORTHO05D000743 3.3e-16 90.5 415 26.0
TWI60G0473 Tripterygium wilfordii HOM05D007909 ORTHO05D000743 3.3e-16 90.5 460 24.3
Haze_07714 Corylus avellana HOM05D007909 ORTHO05D000743 5.6e-16 89.7 218 33.5
FvH4_4g13540 Fragaria vesca HOM05D007909 ORTHO05D000743 7.3e-16 89.4 181 34.8
Atru.chr9.429 Acer truncatum HOM05D007909 ORTHO05D000743 9.6e-16 89.0 157 37.6
Duzib205G0904 Durio zibethinus HOM05D007909 ORTHO05D000743 1.3e-15 88.6 403 27.3
QL03p074219 Quercus lobata HOM05D007909 ORTHO05D000743 1.6e-15 88.2 205 31.7
Glyma.06G203100 Glycine max HOM05D007909 ORTHO05D000743 2.1e-15 87.8 192 31.2
Dinv22785 Davidia involucrata HOM05D001093 ORTHO05D000743 2.8e-15 87.4 436 24.3
QL03p074129 Quercus lobata HOM05D007909 ORTHO05D000743 2.8e-15 87.4 205 31.2
CANSAT80G0086 Cannabis sativa HOM05D007909 ORTHO05D000743 4.8e-15 86.7 164 31.7
Cfa019324 Carpinus fangiana HOM05D007909 ORTHO05D000743 4.8e-15 86.7 127 38.6
CANSAT80G0598 Cannabis sativa HOM05D007909 ORTHO05D000743 1.4e-14 85.1 467 25.5
RcHm_v2.0_Chr7g0183021 Rosa chinensis HOM05D007909 ORTHO05D000743 1.8e-14 84.7 148 37.2
QL03p074381 Quercus lobata HOM05D007909 ORTHO05D000743 3.1e-14 84.0 176 31.8
Migut.I00329 Erythranthe guttata HOM05D001093 ORTHO05D000743 4.0e-14 83.6 404 26.0
Actinidia16122 Actinidia chinensis HOM05D001093 ORTHO05D000743 1.2e-13 82.0 427 25.1
FvH4_5g13930 Fragaria vesca HOM05D007909 ORTHO05D000743 1.2e-13 82.0 150 36.7
FAN08G2750 Fragaria x ananassa HOM05D007909 ORTHO05D000743 1.2e-13 82.0 150 36.7
FAN18G3687 Fragaria x ananassa HOM05D007909 ORTHO05D000743 1.2e-13 82.0 150 36.7
QL12p030770 Quercus lobata HOM05D007909 ORTHO05D000743 1.2e-13 82.0 180 30.0
vmacro16499 Vaccinium macrocarpon HOM05D001093 ORTHO05D000743 1.2e-13 82.0 150 34.0
Haze_07687 Corylus avellana HOM05D007909 ORTHO05D000743 2.0e-13 81.3 268 29.1
QL03p074255 Quercus lobata HOM05D007909 ORTHO05D000743 2.0e-13 81.3 180 30.0
Medtr3g025330 Medicago truncatula HOM05D001093 ORTHO05D010605 2.6e-13 80.9 440 25.0
Rhsim12G0151100 Rhododendron simsii HOM05D001093 ORTHO05D000743 2.6e-13 80.9 184 30.4
PSO675G5193 Papaver somniferum HOM05D001093 ORTHO05D000743 3.4e-13 80.5 151 36.4
Rhsim08G0146400 Rhododendron simsii HOM05D001093 ORTHO05D000743 4.5e-13 80.1 190 31.6
Glyma.06G202900 Glycine max HOM05D007909 ORTHO05D000743 9.9e-13 79.0 296 26.7
TPR.G19667 Trifolium pratense HOM05D007909 ORTHO05D000743 9.9e-13 79.0 192 30.2
Glyma.04G163100 Glycine max HOM05D007909 ORTHO05D000743 1.3e-12 78.6 189 31.7
Phvul.009G191900 Phaseolus vulgaris HOM05D007909 ORTHO05D000743 2.2e-12 77.8 220 28.6
vmacro17606 Vaccinium macrocarpon HOM05D001093 ORTHO05D000743 2.2e-12 77.8 172 29.1
CsaV3_1G005950 Cucumis sativus L. HOM05D007909 ORTHO05D000743 3.8e-12 77.0 164 30.5
Ca_26164_v3 Cicer arietinum L. HOM05D001093 ORTHO05D000743 4.9e-12 76.6 310 25.8
Atru.chr13.1216 Acer truncatum HOM05D007909 ORTHO05D000743 6.4e-12 76.3 157 36.3
MELO3C002025.2 Cucumis melo HOM05D007909 ORTHO05D000743 8.4e-12 75.9 185 29.7
QL10p019356 Quercus lobata HOM05D001093 ORTHO05D010605 1.1e-11 75.5 154 34.4
SGA_v2.0_scaffold313G48311 Striga asiatica HOM05D001093 ORTHO05D000743 1.1e-11 75.5 153 32.7
Sed0028074 Sechium edule HOM05D007909 ORTHO05D000743 1.4e-11 75.1 147 32.7
MSTRG.22985 Avicennia marina HOM05D001093 ORTHO05D000743 2.4e-11 74.3 156 34.6
PSO541G3559 Papaver somniferum HOM05D001093 ORTHO05D000743 2.4e-11 74.3 151 34.4
TWI60G1066 Tripterygium wilfordii HOM05D001093 ORTHO05D000743 2.4e-11 74.3 155 32.9
Cfa019304 Carpinus fangiana HOM05D001093 ORTHO05D000743 5.4e-11 73.2 178 31.5
COL.COLO4_06865 Corchorus olitorius HOM05D007909 ORTHO05D000743 5.4e-11 73.2 155 32.9
Duzib084G0387 Durio zibethinus HOM05D001093 ORTHO05D000743 5.4e-11 73.2 166 35.5
MD06G1202100 Malus domestica HOM05D001093 ORTHO05D000743 7.1e-11 72.8 160 32.5
Duzib205G1796 Durio zibethinus HOM05D001093 ORTHO05D010605 9.3e-11 72.4 170 30.6
Gohir.A12G182333 Gossypium hirsutum HOM05D008195 ORTHO05D000743 2.1e-10 71.2 173 30.6
Phvul.009G191600 Phaseolus vulgaris HOM05D007909 ORTHO05D000743 2.1e-10 71.2 390 23.6
Actinidia35035 Actinidia chinensis HOM05D001093 ORTHO05D000743 3.5e-10 70.5 178 29.8
Lj5A103G64 Lonicera japonica HOM05D001093 ORTHO05D000743 6.0e-10 69.7 149 30.9
SalBow5G5623 Salvia bowleyana HOM05D001093 ORTHO05D000743 6.0e-10 69.7 209 31.6
Sc12g0006650 Simmondsia chinensis HOM05D001093 ORTHO05D000743 6.0e-10 69.7 156 34.0
QL03p074169 Quercus lobata HOM05D007909 ORTHO05D000743 1.8e-09 68.2 146 30.8
Aa31LG5G24220 Aethionema arabicum HOM05D007909 ORTHO05D000743 2.3e-09 67.8 87 43.7
Aqoxy3G03627 Aquilegia oxysepala HOM05D001093 ORTHO05D000743 2.3e-09 67.8 149 33.6
Nn3g17441 Nelumbo nucifera HOM05D001093 ORTHO05D000743 2.3e-09 67.8 202 28.2
Aqoxy3G03628 Aquilegia oxysepala HOM05D001093 ORTHO05D000743 3.0e-09 67.4 440 23.4
MD14G1211300 Malus domestica HOM05D007909 ORTHO05D000743 3.9e-09 67.0 120 33.3
Aqoxy3G00533 Aquilegia oxysepala HOM05D001093 ORTHO05D000743 8.7e-09 65.9 144 32.6
QL09p031893 Quercus lobata HOM05D007909 ORTHO05D000743 1.1e-08 65.5 134 31.3
Gohir.D12G185300 Gossypium hirsutum HOM05D008195 ORTHO05D000743 1.9e-08 64.7 261 25.7
Gorai.008G198700 Gossypium raimondii HOM05D008195 ORTHO05D000743 1.9e-08 64.7 261 26.1
ECA247G2835 Erigeron canadensis HOM05D001093 ORTHO05D000743 4.3e-08 63.5 176 27.3
HanXRQChr02g0044731 Helianthus annuus HOM05D001093 ORTHO05D000743 4.3e-08 63.5 449 22.0
VMungo1309G0161 Vigna mungo HOM05D007909 ORTHO05D000743 4.3e-08 63.5 195 26.7
TAR629G2812 Trochodendron aralioides HOM05D001093 ORTHO05D000743 9.6e-08 62.4 153 31.4
FvH4_5g13941 Fragaria vesca HOM05D001093 ORTHO05D000743 1.6e-07 61.6 168 28.0
TAR264G0006 Trochodendron aralioides HOM05D001093 ORTHO05D000743 3.7e-07 60.5 223 27.8
VMungo1309G2619 Vigna mungo HOM05D007909 ORTHO05D000743 8.1e-07 59.3 101 31.7
Manes.14G085201 Manihot esculenta HOM05D001093 ORTHO05D000743 1.1e-06 58.9 148 27.7
DCAR_030040 Daucus carota HOM05D001093 ORTHO05D000743 2.4e-06 57.8 143 27.3
Ah.11g047850 Amaranthus hybridus HOM05D008195 ORTHO05D000743 3.1e-06 57.4 178 27.0
EL10Ac5g11122 Beta vulgaris HOM05D001093 ORTHO05D000743 5.3e-06 56.6 387 21.7
Hund02591 Selenicereus undatus HOM05D001093 ORTHO05D000743 5.3e-06 56.6 154 28.6


User provided reference genes

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