Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aa31LG11G1640 Aethionema arabicum HOM05D005199 ORTHO05D006277 2.0e-215 752.3 424 100.0
BcaC01g02441 Brassica carinata HOM05D005199 ORTHO05D006277 2.2e-153 546.2 419 78.5
AT5G61850 Arabidopsis thaliana HOM05D005199 ORTHO05D006277 1.4e-152 543.5 436 76.4
A06p28520 Brassica napus HOM05D005199 ORTHO05D006277 3.2e-152 542.3 427 77.3
BraA06t25798Z Brassica rapa HOM05D005199 ORTHO05D006277 3.2e-152 542.3 427 77.3
C03p65260 Brassica napus HOM05D005199 ORTHO05D006277 1.2e-151 540.4 423 77.8
BolC3t18779H Brassica oleracea HOM05D005199 ORTHO05D006277 1.2e-151 540.4 423 77.8
Carub.0008s2255 Capsella rubella HOM05D005199 ORTHO05D006277 8.7e-150 534.3 433 78.5
CARHR275620 Cardamine hirsuta HOM05D005199 ORTHO05D006277 1.1e-149 533.9 425 77.9
Thhalv10005606m.g Eutrema salsugineum HOM05D005199 ORTHO05D006277 7.4e-149 531.2 427 77.0
Sp2g25050 Schrenkiella parvula HOM05D005199 ORTHO05D006277 9.7e-149 530.8 427 74.0
A02p41740 Brassica napus HOM05D005199 ORTHO05D006277 2.2e-148 529.6 424 80.0
BcaB02g09607 Brassica carinata HOM05D005199 ORTHO05D006277 6.3e-148 528.1 422 75.6
BcaB07g29818 Brassica carinata HOM05D005199 ORTHO05D006277 1.4e-147 526.9 421 75.3
BraA02t09114Z Brassica rapa HOM05D005199 ORTHO05D006277 1.2e-146 523.9 428 79.2
AL8G38620 Arabidopsis lyrata HOM05D005199 ORTHO05D006277 1.5e-146 523.5 435 77.0
C02p61660 Brassica napus HOM05D005199 ORTHO05D006277 2.6e-146 522.7 422 79.6
BcaC03g18101 Brassica carinata HOM05D005199 ORTHO05D006277 1.0e-145 520.8 422 79.4
BolC2t12224H Brassica oleracea HOM05D005199 ORTHO05D006277 7.2e-144 514.6 426 78.4
THA.LOC104818285 Tarenaya hassleriana HOM05D005199 ORTHO05D006277 7.2e-136 488.0 430 74.7
Ciclev10033942m.g Citrus clementina HOM05D005199 ORTHO05D006277 8.8e-134 481.1 408 65.2
Cfa018703 Carpinus fangiana HOM05D005199 ORTHO05D006277 8.2e-132 474.6 399 63.9
Potri.015G106900 Populus trichocarpa HOM05D005199 ORTHO05D006277 1.4e-131 473.8 403 64.5
Glyma.06G163600 Glycine max HOM05D005199 ORTHO05D006277 5.3e-131 471.9 415 70.6
Sabra15G0129500 Salix brachista HOM05D005199 ORTHO05D006277 2.6e-130 469.5 405 64.0
Sabra15G0127400 Salix brachista HOM05D005199 ORTHO05D006277 3.4e-130 469.2 405 64.0
QL10p000401 Quercus lobata HOM05D005199 ORTHO05D006277 7.7e-130 468.0 401 67.3
THA.LOC104801769 Tarenaya hassleriana HOM05D005199 ORTHO05D006277 2.2e-129 466.5 390 69.2
Medtr3g098560 Medicago truncatula HOM05D005199 ORTHO05D006277 8.5e-129 464.5 400 67.0
Cc04_g05820 Coffea canephora HOM05D005199 ORTHO05D006277 2.5e-128 463.0 402 65.4
Haze_07093 Corylus avellana HOM05D005199 ORTHO05D006277 2.5e-128 463.0 405 67.7
Manes.06G127100 Manihot esculenta HOM05D005199 ORTHO05D006277 7.2e-128 461.5 407 67.3
Thecc.03G141200 Theobroma cacao HOM05D005199 ORTHO05D006277 2.1e-127 459.9 400 67.5
Psat5g056040 Pisum sativum HOM05D005199 ORTHO05D006277 2.7e-127 459.5 400 66.5
Ca_10877_v3 Cicer arietinum L. HOM05D005199 ORTHO05D006277 3.6e-127 459.1 403 66.5
Lj1g0022547 Lotus japonicus HOM05D005199 ORTHO05D006277 3.6e-127 459.1 402 68.7
VMungo1309G0841 Vigna mungo HOM05D005199 ORTHO05D006277 8.0e-127 458.0 406 68.2
Prupe.5G140700 Prunus persica HOM05D005199 ORTHO05D006277 1.8e-126 456.8 420 63.6
Duzib205G1536 Durio zibethinus HOM05D005199 ORTHO05D006277 3.9e-126 455.7 405 67.4
Nitab4.5_0000976g0090 Nicotiana tabacum HOM05D005199 ORTHO05D006277 5.2e-126 455.3 424 67.2
ECA232G4131 Erigeron canadensis HOM05D005199 ORTHO05D006277 8.8e-126 454.5 447 57.0
TWI39G0590 Tripterygium wilfordii HOM05D005199 ORTHO05D006277 8.8e-126 454.5 399 65.4
Gohir.A07G046500 Gossypium hirsutum HOM05D005199 ORTHO05D006277 1.1e-125 454.1 407 70.8
CiPaw.12G000800 Carya illinoinensis HOM05D005199 ORTHO05D006277 1.5e-125 453.8 410 63.7
Gohir.D07G050800 Gossypium hirsutum HOM05D005199 ORTHO05D006277 1.5e-125 453.8 407 73.5
Phvul.009G160900 Phaseolus vulgaris HOM05D005199 ORTHO05D006277 2.0e-125 453.4 407 70.5
Peaxi162Scf00314g00633 Petunia axillaris HOM05D005199 ORTHO05D006277 3.3e-125 452.6 418 67.2
CAN.G843.7 Capsicum annuum HOM05D005199 ORTHO05D006277 9.7e-125 451.1 422 64.2
MD06G1129500 Malus domestica HOM05D005199 ORTHO05D006277 1.3e-124 450.7 420 59.3
Nitab4.5_0011600g0020 Nicotiana tabacum HOM05D005199 ORTHO05D006277 2.2e-124 449.9 406 68.0
Dinv13715 Davidia involucrata HOM05D005199 ORTHO05D006277 2.8e-124 449.5 427 63.9
GSVIVG01008655001 Vitis vinifera HOM05D005199 ORTHO05D006277 4.8e-124 448.7 391 66.2
Cpa.g.sc13.181 Carica papaya HOM05D005199 ORTHO05D006277 8.2e-124 448.0 403 62.3
Sopen03g037080 Solanum pennellii HOM05D005199 ORTHO05D006277 1.1e-123 447.6 415 67.2
SalBow7G2845 Salvia bowleyana HOM05D005199 ORTHO05D006277 1.4e-123 447.2 406 66.0
Atru.chr6.1926 Acer truncatum HOM05D005199 ORTHO05D006277 2.4e-123 446.4 405 67.7
HanXRQChr09g0273821 Helianthus annuus HOM05D005199 ORTHO05D006277 2.4e-123 446.4 420 60.7
Nn3g16267 Nelumbo nucifera HOM05D005199 ORTHO05D006277 4.1e-123 445.7 412 65.8
Duzib084G1266 Durio zibethinus HOM05D005199 ORTHO05D006277 9.1e-123 444.5 399 66.7
Oeu013661.1 Olea europaea HOM05D005199 ORTHO05D006277 1.2e-122 444.1 396 63.9
Rhsim08G0198200 Rhododendron simsii HOM05D005199 ORTHO05D006277 1.2e-122 444.1 403 66.5
Manes.14G044200 Manihot esculenta HOM05D005199 ORTHO05D006277 1.6e-122 443.7 402 65.4
arahy.Tifrunner.gnm1.ann1.P6GRAY Arachis hypogaea HOM05D005199 ORTHO05D006277 3.5e-122 442.6 418 67.2
arahy.Tifrunner.gnm1.ann1.4TKD14 Arachis hypogaea HOM05D005199 ORTHO05D006277 4.5e-122 442.2 427 67.0
Gorai.001G053900 Gossypium raimondii HOM05D005199 ORTHO05D006277 7.7e-122 441.4 407 72.2
vmacro19190 Vaccinium macrocarpon HOM05D005199 ORTHO05D006277 7.7e-122 441.4 403 66.7
SGA_v2.0_scaffold37G14675 Striga asiatica HOM05D005199 ORTHO05D006277 1.7e-121 440.3 406 65.0
Actinidia25514 Actinidia chinensis HOM05D005199 ORTHO05D006277 2.2e-121 439.9 397 65.7
MD14G1146700 Malus domestica HOM05D005199 ORTHO05D006277 2.2e-121 439.9 419 63.0
CSS0050347 Camellia sinensis var. sinensis HOM05D005199 ORTHO05D006277 3.8e-121 439.1 393 67.9
Migut.I00669 Erythranthe guttata HOM05D005199 ORTHO05D006277 5.0e-121 438.7 410 67.6
Dinv23231 Davidia involucrata HOM05D005199 ORTHO05D006277 8.5e-121 438.0 393 69.0
MELO3C026157.2 Cucumis melo HOM05D005199 ORTHO05D006277 1.1e-120 437.6 401 68.8
CsaV3_1G000050 Cucumis sativus L. HOM05D005199 ORTHO05D006277 7.2e-120 434.9 401 69.3
Hma1.2p1_0577F.1_g182220 Hydrangea macrophylla HOM05D005199 ORTHO05D006277 4.7e-119 432.2 396 64.9
ClCG06G018380 Citrullus lanatus HOM05D005199 ORTHO05D006277 6.1e-119 431.8 367 76.3
TAR374G0192 Trochodendron aralioides HOM05D005199 ORTHO05D006277 1.4e-118 430.6 390 66.9
DCAR_016338 Daucus carota HOM05D005199 ORTHO05D006277 2.3e-118 429.9 401 57.9
Lsat_1_v5_gn_4_84380 Lactuca sativa HOM05D005199 ORTHO05D006277 2.3e-118 429.9 436 60.6
SHI14097 Sapria himalayana HOM05D005199 ORTHO05D006277 2.3e-118 429.9 448 54.9
TWI14G0958 Tripterygium wilfordii HOM05D005199 ORTHO05D006277 2.0e-117 426.8 412 63.8
CDE02G3820 Ceratophyllum demersum HOM05D005199 ORTHO05D006277 9.7e-117 424.5 402 57.5
CDE06G1181 Ceratophyllum demersum HOM05D005199 ORTHO05D006277 9.7e-117 424.5 402 57.5
PGR102G3000 Punica granatum HOM05D005199 ORTHO05D006277 2.0e-114 416.8 398 59.5
RcHm_v2.0_Chr7g0188591 Rosa chinensis HOM05D005199 ORTHO05D006277 3.5e-114 416.0 413 62.0
DCAR_025645 Daucus carota HOM05D005199 ORTHO05D006277 4.5e-114 415.6 402 62.9
MBI10_g44970_MAGBIO Magnolia biondii HOM05D005199 ORTHO05D006277 4.5e-114 415.6 384 69.3
Sed0007314 Sechium edule HOM05D005199 ORTHO05D006277 1.9e-112 410.2 346 71.4
FAN13G0330 Fragaria x ananassa HOM05D005199 ORTHO05D006277 3.2e-112 409.5 410 61.7
Sc22g0003300 Simmondsia chinensis HOM05D005199 ORTHO05D006277 4.2e-112 409.1 453 62.3
FAN08G3145 Fragaria x ananassa HOM05D005199 ORTHO05D006277 5.5e-112 408.7 408 62.3
FAN04G2629 Fragaria x ananassa HOM05D005199 ORTHO05D006277 1.2e-111 407.5 413 60.5
Eucgr.K02192 Eucalyptus grandis HOM05D005199 ORTHO05D006277 1.6e-111 407.1 352 63.9
AUR62032216 Chenopodium quinoa HOM05D005199 ORTHO05D006277 1.0e-110 404.4 338 62.4
COL.COLO4_37264 Corchorus olitorius HOM05D005199 ORTHO05D006277 1.4e-110 404.1 379 67.8
FAN18G4150 Fragaria x ananassa HOM05D005199 ORTHO05D006277 2.3e-110 403.3 411 61.1
EL10Ac5g11279 Beta vulgaris HOM05D005199 ORTHO05D006277 5.2e-110 402.1 507 51.1
Ah.02g114560 Amaranthus hybridus HOM05D005199 ORTHO05D006277 2.7e-106 389.8 358 60.6
Lj9A487G53 Lonicera japonica HOM05D005199 ORTHO05D006277 7.7e-106 388.3 376 58.5
ATR0582G251 Amborella trichopoda HOM05D005199 ORTHO05D006277 1.1e-104 384.4 395 61.5
PSO478G1920 Papaver somniferum HOM05D005199 ORTHO05D006277 1.2e-103 380.9 345 61.7
SGA_v2.0_scaffold168G38552 Striga asiatica HOM05D005199 ORTHO05D006277 1.6e-103 380.6 346 58.7
Aqoxy5G03105 Aquilegia oxysepala HOM05D005199 ORTHO05D006277 1.8e-102 377.1 406 55.9
FvH4_3g04170 Fragaria vesca HOM05D005199 ORTHO05D006277 2.3e-102 376.7 410 55.9
arahy.Tifrunner.gnm1.ann1.31D2RV Arachis hypogaea HOM05D005199 ORTHO05D006277 4.0e-102 375.9 391 53.5
FAN11G0779 Fragaria x ananassa HOM05D005199 ORTHO05D006277 4.0e-102 375.9 410 55.6
arahy.Tifrunner.gnm1.ann1.33WSUR Arachis hypogaea HOM05D005199 ORTHO05D006277 5.2e-102 375.6 396 53.3
unitig_0.g1099 Utricularia gibba HOM05D005199 ORTHO05D006277 3.4e-101 372.9 314 62.1
TPR.G25958 Trifolium pratense HOM05D005199 ORTHO05D006277 7.5e-101 371.7 342 63.2
FvH4_3g03530 Fragaria vesca HOM05D005199 ORTHO05D006277 1.8e-99 367.1 407 52.6
FAN11G0489 Fragaria x ananassa HOM05D005199 ORTHO05D006277 1.8e-99 367.1 407 51.8
FAN21G1800 Fragaria x ananassa HOM05D005199 ORTHO05D006277 3.5e-98 362.8 408 52.0
unitig_61.g26224 Utricularia gibba HOM05D005199 ORTHO05D006277 4.5e-98 362.5 302 67.5
FAN25G0693 Fragaria x ananassa HOM05D005199 ORTHO05D006277 1.0e-97 361.3 425 52.7
Zm00001eb430240 Zea mays HOM05D005199 ORTHO05D006277 5.2e-94 349.0 416 52.2
Os04g0598300 Oryza sativa ssp. japonica HOM05D005199 ORTHO05D006277 2.9e-92 343.2 360 59.7
Lalb_Chr11g0069151 Lupinus albus HOM05D005199 ORTHO05D006277 8.0e-87 325.1 175 85.1
Zm00001eb071990 Zea mays HOM05D005199 ORTHO05D006277 2.0e-85 320.5 378 50.0
SEGI_03714 Sequoiadendron giganteum HOM05D005199 ORTHO05D006277 9.8e-85 318.2 386 46.6
AUR62044212 Chenopodium quinoa HOM05D005199 ORTHO05D006277 1.3e-84 317.8 419 46.8
AUR62043310 Chenopodium quinoa HOM05D005199 ORTHO05D006277 2.4e-83 313.5 338 52.4
SEGI_00497 Sequoiadendron giganteum HOM05D005199 ORTHO05D006277 2.4e-83 313.5 335 52.8
Mapoly0113s0034 Marchantia polymorpha HOM05D005199 ORTHO05D006277 1.7e-81 307.4 347 49.0
Migut.D01179 Erythranthe guttata HOM05D005199 ORTHO05D006277 6.6e-81 305.4 160 85.6
Pp3c3_11670 Physcomitrium patens HOM05D005199 ORTHO05D006277 1.9e-75 287.3 367 45.5
HPP92_021614 Vanilla planifolia HOM05D005199 ORTHO05D006277 3.2e-75 286.6 378 52.1
Pp3c13_8760 Physcomitrium patens HOM05D005199 ORTHO05D006277 1.0e-73 281.6 326 47.2
Lalb_Chr07g0183841 Lupinus albus HOM05D005199 ORTHO05D006277 9.6e-64 248.4 293 60.8
Glyma.04G202002 Glycine max HOM05D005199 ORTHO05D006277 2.1e-63 247.3 132 86.4
Lalb_Chr12g0202561 Lupinus albus HOM05D005199 ORTHO05D006277 1.1e-62 245.0 287 58.9
PGSC0003DMG400014174 Solanum tuberosum HOM05D005199 ORTHO05D006277 8.7e-57 225.3 116 87.9
Lalb_Chr07g0183831 Lupinus albus HOM05D005199 ORTHO05D006277 4.9e-52 209.5 115 81.7
FvH4_5g09660 Fragaria vesca HOM05D005199 ORTHO05D006277 6.4e-52 209.1 303 54.8
SMO347G0183 Selaginella moellendorffii HOM05D005199 ORTHO05D006277 3.1e-46 190.3 113 72.6
FAN25G1078 Fragaria x ananassa HOM05D005199 ORTHO05D006277 3.4e-45 186.8 166 55.4
Sabra15G0071900 Salix brachista HOM05D005199 ORTHO05D006277 1.6e-42 177.9 287 45.6
Lalb_Chr12g0202551 Lupinus albus HOM05D005199 ORTHO05D006277 5.1e-41 172.9 92 82.6
CBR_g60061 Chara braunii HOM05D005199 ORTHO05D006277 1.4e-38 164.9 334 33.8
Actinidia18295 Actinidia chinensis HOM05D005199 ORTHO05D006277 2.1e-34 151.0 170 54.1
AagrBONN_evm.TU.Sc2ySwM_228.2166 Anthoceros agrestis HOM05D005199 ORTHO05D006277 2.1e-26 124.4 276 33.0
Lalb_Chr11g0069141 Lupinus albus HOM05D005199 ORTHO05D006277 7.9e-26 122.5 162 48.1
CANSAT11G1658 Cannabis sativa HOM05D005199 ORTHO05D006277 6.3e-23 112.8 86 68.6
CDE05G0289 Ceratophyllum demersum HOM05D000263 ORTHO05D000213 3.1e-14 84.0 51 76.5
SMO347G0146 Selaginella moellendorffii HOM05D005199 ORTHO05D006277 5.9e-13 79.7 68 55.9


User provided reference genes

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