Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aa31LG11G15280 Aethionema arabicum HOM05D005666 ORTHO05D007183 0.0e+00 1380.9 706 100.0
AL6G30550 Arabidopsis lyrata HOM05D005666 ORTHO05D007183 0.0e+00 1162.5 701 83.9
Thhalv10012831m.g Eutrema salsugineum HOM05D005666 ORTHO05D007183 0.0e+00 1162.1 701 83.5
AT5G19130 Arabidopsis thaliana HOM05D005666 ORTHO05D007183 0.0e+00 1157.5 700 83.7
Sp6g25230 Schrenkiella parvula HOM05D005666 ORTHO05D007183 0.0e+00 1151.3 703 82.6
Carub.0006s1746 Capsella rubella HOM05D005666 ORTHO05D007183 0.0e+00 1151.0 707 82.7
BraA10t44118Z Brassica rapa HOM05D005666 ORTHO05D007183 0.0e+00 1139.4 707 81.6
A10p20490 Brassica napus HOM05D005666 ORTHO05D007183 0.0e+00 1137.9 707 82.0
C09p57110 Brassica napus HOM05D005666 ORTHO05D007183 0.0e+00 1136.3 707 82.0
BolC9t58577H Brassica oleracea HOM05D005666 ORTHO05D007183 0.0e+00 1133.6 707 81.8
BcaB08g36600 Brassica carinata HOM05D005666 ORTHO05D007183 0.0e+00 1131.7 708 81.6
BcaC04g18594 Brassica carinata HOM05D005666 ORTHO05D007183 0.0e+00 1128.6 707 81.6
Atru.chr6.2394 Acer truncatum HOM05D005666 ORTHO05D007183 1.7e-235 819.7 718 61.0
MD09G1027000 Malus domestica HOM05D005666 ORTHO05D007183 1.7e-235 819.7 707 61.5
Cpa.g.sc130.81 Carica papaya HOM05D005666 ORTHO05D007183 4.3e-234 815.1 724 60.6
MD17G1027000 Malus domestica HOM05D005666 ORTHO05D007183 6.8e-232 807.7 706 61.2
QL02p074714 Quercus lobata HOM05D005666 ORTHO05D007183 1.5e-231 806.6 710 59.9
THA.LOC104824726 Tarenaya hassleriana HOM05D005666 ORTHO05D007183 9.8e-231 803.9 697 61.7
Gorai.012G064300 Gossypium raimondii HOM05D005666 ORTHO05D007183 3.2e-229 798.9 729 59.3
CANSAT64G2468 Cannabis sativa HOM05D005666 ORTHO05D007183 9.2e-229 797.3 713 60.2
Duzib147G1248 Durio zibethinus HOM05D005666 ORTHO05D007183 9.2e-229 797.3 729 58.8
Gohir.D04G057600 Gossypium hirsutum HOM05D005666 ORTHO05D007183 1.2e-228 797.0 729 59.3
Potri.001G345200 Populus trichocarpa HOM05D005666 ORTHO05D007183 3.5e-228 795.4 717 59.1
Sabra16G0224200 Salix brachista HOM05D005666 ORTHO05D007183 3.0e-227 792.3 716 59.2
Glyma.05G003600 Glycine max HOM05D005666 ORTHO05D007183 4.3e-226 788.5 706 57.1
MELO3C021580.2 Cucumis melo HOM05D005666 ORTHO05D007183 5.6e-226 788.1 709 57.5
ClCG09G019260 Citrullus lanatus HOM05D005666 ORTHO05D007183 1.6e-225 786.6 712 57.6
CsaV3_5G027130 Cucumis sativus L. HOM05D005666 ORTHO05D007183 4.7e-225 785.0 709 57.5
Hma1.2p1_0999F.1_g246210 Hydrangea macrophylla HOM05D005666 ORTHO05D007183 2.6e-223 779.2 699 60.4
TWI56G0621 Tripterygium wilfordii HOM05D005666 ORTHO05D007183 2.6e-223 779.2 712 58.1
Gohir.A05G355700 Gossypium hirsutum HOM05D005666 ORTHO05D007183 4.4e-223 778.5 712 59.7
CARHR193820 Cardamine hirsuta HOM05D005666 ORTHO05D007183 9.9e-223 777.3 482 80.7
GSVIVG01032407001 Vitis vinifera HOM05D005666 ORTHO05D007183 9.9e-223 777.3 707 59.1
RcHm_v2.0_Chr2g0172791 Rosa chinensis HOM05D005666 ORTHO05D007183 1.7e-222 776.5 735 56.6
BcaB05g23370 Brassica carinata HOM05D005666 ORTHO05D007183 3.2e-221 772.3 700 63.3
Manes.17G112200 Manihot esculenta HOM05D005666 ORTHO05D007183 7.1e-221 771.2 721 57.8
Haze_10618 Corylus avellana HOM05D005666 ORTHO05D007183 1.2e-220 770.4 690 60.6
Ciclev10014455m.g Citrus clementina HOM05D005666 ORTHO05D007183 2.1e-220 769.6 699 58.7
Lj2g0025454 Lotus japonicus HOM05D005666 ORTHO05D007183 2.1e-220 769.6 684 58.3
Sed0018750 Sechium edule HOM05D005666 ORTHO05D007183 2.1e-220 769.6 709 56.6
Actinidia35772 Actinidia chinensis HOM05D005666 ORTHO05D007183 3.5e-220 768.8 711 57.7
COL.COLO4_29116 Corchorus olitorius HOM05D005666 ORTHO05D007183 6.0e-220 768.1 754 57.7
Phvul.004G006900 Phaseolus vulgaris HOM05D005666 ORTHO05D007183 2.3e-219 766.1 704 56.0
FAN14G3607 Fragaria x ananassa HOM05D005666 ORTHO05D007183 3.9e-219 765.4 734 56.1
CiPaw.03G043800 Carya illinoinensis HOM05D005666 ORTHO05D007183 3.3e-218 762.3 710 57.0
Rhsim10G0213300 Rhododendron simsii HOM05D005666 ORTHO05D007183 9.6e-218 760.8 711 59.4
TAR371G0349 Trochodendron aralioides HOM05D005666 ORTHO05D007183 9.6e-218 760.8 712 58.0
vmacro18287 Vaccinium macrocarpon HOM05D005666 ORTHO05D007183 9.6e-218 760.8 704 59.1
PGR083G1531 Punica granatum HOM05D005666 ORTHO05D007183 1.2e-217 760.4 706 57.1
Lalb_Chr13g0300491 Lupinus albus HOM05D005666 ORTHO05D007183 2.1e-217 759.6 700 56.6
TPR.G14074 Trifolium pratense HOM05D005666 ORTHO05D007183 5.2e-216 755.0 711 56.1
FAN05G0542 Fragaria x ananassa HOM05D005666 ORTHO05D007183 6.8e-216 754.6 749 55.4
VMungo0464G0315 Vigna mungo HOM05D005666 ORTHO05D007183 8.9e-216 754.2 715 54.7
Lalb_Chr12g0199101 Lupinus albus HOM05D005666 ORTHO05D007183 1.2e-215 753.8 701 57.2
FAN09G4801 Fragaria x ananassa HOM05D005666 ORTHO05D007183 3.4e-215 752.3 734 55.0
FAN02G4175 Fragaria x ananassa HOM05D005666 ORTHO05D007183 5.8e-215 751.5 743 55.0
Eucgr.L01920 Eucalyptus grandis HOM05D005666 ORTHO05D007183 4.2e-213 745.3 712 55.8
arahy.Tifrunner.gnm1.ann1.XQUA9L Arachis hypogaea HOM05D005666 ORTHO05D007183 2.1e-212 743.0 702 55.4
Thecc.04G017300 Theobroma cacao HOM05D005666 ORTHO05D007183 6.0e-212 741.5 727 56.1
Rhsim08G0049000 Rhododendron simsii HOM05D005666 ORTHO05D007183 1.0e-211 740.7 691 58.6
ECA246G2761 Erigeron canadensis HOM05D005666 ORTHO05D007183 2.3e-211 739.6 704 56.4
Sc03g0007440 Simmondsia chinensis HOM05D005666 ORTHO05D007183 5.1e-211 738.4 702 56.6
Medtr8g094170 Medicago truncatula HOM05D005666 ORTHO05D007183 8.7e-211 737.6 709 54.6
Prupe.3G291700 Prunus persica HOM05D005666 ORTHO05D007183 3.3e-210 735.7 652 60.1
Migut.K01395 Erythranthe guttata HOM05D005666 ORTHO05D007183 4.3e-210 735.3 690 57.2
Ca_04159_v3 Cicer arietinum L. HOM05D005666 ORTHO05D007183 2.8e-209 732.6 691 54.8
HanXRQChr15g0475291 Helianthus annuus HOM05D005666 ORTHO05D007183 2.0e-207 726.5 697 56.1
CAN.G1057.3 Capsicum annuum HOM05D005666 ORTHO05D007183 4.9e-206 721.8 698 54.0
AUR62026681 Chenopodium quinoa HOM05D005666 ORTHO05D007183 1.4e-205 720.3 719 54.4
SalBow7G2092 Salvia bowleyana HOM05D005666 ORTHO05D007183 9.3e-205 717.6 706 54.4
PGSC0003DMG400006959 Solanum tuberosum HOM05D005666 ORTHO05D007183 9.3e-205 717.6 698 54.7
Nitab4.5_0008365g0020 Nicotiana tabacum HOM05D005666 ORTHO05D007183 2.1e-204 716.5 702 55.0
PSO017G6377 Papaver somniferum HOM05D005666 ORTHO05D007183 6.0e-204 714.9 698 57.0
SGA_v2.0_scaffold47G17503 Striga asiatica HOM05D005666 ORTHO05D007183 7.8e-204 714.5 704 56.0
Aqoxy3G01199 Aquilegia oxysepala HOM05D005666 ORTHO05D007183 1.7e-203 713.4 723 54.8
Sopen02g016930 Solanum pennellii HOM05D005666 ORTHO05D007183 1.7e-203 713.4 711 53.6
Nn3g16730 Nelumbo nucifera HOM05D005666 ORTHO05D007183 3.0e-203 712.6 692 56.6
Ah.05g168070 Amaranthus hybridus HOM05D005666 ORTHO05D007183 3.9e-203 712.2 698 54.3
DCAR_027499 Daucus carota HOM05D005666 ORTHO05D007183 3.9e-203 712.2 679 56.4
arahy.Tifrunner.gnm1.ann1.D3X7TW Arachis hypogaea HOM05D005666 ORTHO05D007183 1.3e-201 707.2 682 54.8
CSS0006540 Camellia sinensis var. sinensis HOM05D005666 ORTHO05D007183 1.3e-201 707.2 653 58.3
FvH4_6g51190 Fragaria vesca HOM05D005666 ORTHO05D007183 2.1e-201 706.4 684 55.7
PSO478G0823 Papaver somniferum HOM05D005666 ORTHO05D007183 4.0e-200 702.2 698 56.0
Hund22837 Selenicereus undatus HOM05D005666 ORTHO05D007183 5.3e-200 701.8 716 54.5
Cc07_g01670 Coffea canephora HOM05D005666 ORTHO05D007183 7.6e-199 698.0 720 53.9
Lsat_1_v5_gn_0_47721 Lactuca sativa HOM05D005666 ORTHO05D007183 1.9e-197 693.3 671 55.4
Glyma.19G004600 Glycine max HOM05D005666 ORTHO05D007183 3.5e-196 689.1 643 54.9
HanXRQChr17g0548481 Helianthus annuus HOM05D005666 ORTHO05D007183 4.6e-196 688.7 704 52.6
Lju41A42G100 Lonicera japonica HOM05D005666 ORTHO05D007183 1.3e-195 687.2 615 58.7
Nitab4.5_0002529g0030 Nicotiana tabacum HOM05D005666 ORTHO05D007183 3.9e-195 685.6 684 55.0
Hma1.2p1_0999F.1_g246220 Hydrangea macrophylla HOM05D005666 ORTHO05D007183 4.5e-191 672.2 595 61.3
Solyc02g067820.4 Solanum lycopersicum HOM05D005666 ORTHO05D007183 7.1e-189 664.8 688 53.1
Psat1g054440 Pisum sativum HOM05D005666 ORTHO05D007183 6.0e-188 661.8 604 56.5
Dinv33442 Davidia involucrata HOM05D005666 ORTHO05D007183 6.7e-187 658.3 653 55.3
Oeu048621.1 Olea europaea HOM05D005666 ORTHO05D007183 8.2e-185 651.4 599 57.8
EL10Ac1g01578 Beta vulgaris HOM05D005666 ORTHO05D007183 1.8e-184 650.2 723 50.9
CDE05G2460 Ceratophyllum demersum HOM05D005666 ORTHO05D007183 2.4e-184 649.8 702 51.4
Peaxi162Scf00080g00117 Petunia axillaris HOM05D005666 ORTHO05D007183 2.4e-184 649.8 681 52.9
MBI16_g31718_MAGBIO Magnolia biondii HOM05D005666 ORTHO05D007183 1.1e-181 641.0 708 51.6
FAN05G2905 Fragaria x ananassa HOM05D005666 ORTHO05D007183 5.5e-181 638.6 629 56.3
DCAR_011253 Daucus carota HOM05D005666 ORTHO05D007183 6.7e-179 631.7 773 48.0
Zm00001eb156580 Zea mays HOM05D005666 ORTHO05D007183 7.2e-173 611.7 710 47.6
CSS0011984 Camellia sinensis var. sinensis HOM05D005666 ORTHO05D007183 7.9e-172 608.2 597 58.1
unitig_747.g21863 Utricularia gibba HOM05D005666 ORTHO05D007183 6.3e-169 598.6 709 49.5
HPP92_013793 Vanilla planifolia HOM05D005666 ORTHO05D007183 2.6e-167 593.2 706 49.7
Eucgr.J02243 Eucalyptus grandis HOM05D005666 ORTHO05D007183 2.7e-164 583.2 517 58.2
ATR0686G164 Amborella trichopoda HOM05D005666 ORTHO05D007183 2.5e-157 560.1 609 51.1
CSS0008870 Camellia sinensis var. sinensis HOM05D005666 ORTHO05D007183 1.1e-136 491.5 415 61.7
vmacro06910 Vaccinium macrocarpon HOM05D005666 ORTHO05D007183 5.0e-134 482.6 533 53.8
Actinidia16943 Actinidia chinensis HOM05D005666 ORTHO05D007183 5.6e-133 479.2 633 45.5
AUR62040590 Chenopodium quinoa HOM05D005666 ORTHO05D007183 1.2e-119 434.9 426 53.3
Mapoly0008s0195 Marchantia polymorpha HOM05D005666 ORTHO05D007183 2.4e-112 410.6 747 36.7
AagrBONN_evm.TU.Sc2ySwM_344.4982 Anthoceros agrestis HOM05D005666 ORTHO05D007183 9.2e-112 408.7 774 34.9
SMO134G0274 Selaginella moellendorffii HOM05D005666 ORTHO05D007183 4.9e-105 386.3 706 36.0
THA.LOC109116951 Tarenaya hassleriana HOM05D005666 ORTHO05D007183 1.6e-95 354.8 295 65.4
Pp3c22_6140 Physcomitrium patens HOM05D005666 ORTHO05D007183 1.2e-90 338.6 485 41.0
ATR0762G005 Amborella trichopoda HOM05D005666 ORTHO05D007183 6.9e-83 312.8 325 50.5
SEGI_39396 Sequoiadendron giganteum HOM05D005666 ORTHO05D007183 1.4e-80 305.1 331 50.2
ATR0919G001 Amborella trichopoda HOM05D005666 ORTHO05D007183 3.6e-63 247.3 234 54.3
SHI16418 Sapria himalayana HOM05D005666 ORTHO05D007183 3.6e-55 220.7 289 46.7
SHI16416 Sapria himalayana HOM05D005666 ORTHO05D007183 5.2e-46 190.3 263 44.1
CBR_g49194 Chara braunii HOM05D005666 ORTHO05D007183 1.5e-45 188.7 459 30.1
A02p05250 Brassica napus HOM05D005666 ORTHO05D007183 9.7e-45 186.0 311 39.9
Os01g0682200 Oryza sativa ssp. japonica HOM05D005666 ORTHO05D007183 1.8e-43 181.8 255 42.0
THA.LOC104820325 Tarenaya hassleriana HOM05D005666 ORTHO05D007183 8.0e-39 166.4 156 57.7
MCO10G117 Micromonas commoda HOM05D005666 ORTHO05D007183 1.5e-32 145.6 496 29.6
TPR.G20372 Trifolium pratense HOM05D005666 ORTHO05D007183 3.6e-31 141.0 156 48.1
Oeu030978.1 Olea europaea HOM05D005666 ORTHO05D007183 3.1e-27 127.9 122 56.6
BolC2t06938H Brassica oleracea HOM05D005666 ORTHO05D043081 4.1e-19 100.9 183 40.4
Oeu048620.1 Olea europaea HOM05D005666 ORTHO05D007183 1.3e-17 95.9 91 54.9
CiPaw.04G028500 Carya illinoinensis HOM05D005666 ORTHO05D007183 2.9e-17 94.7 62 77.4
Cre03.g201664 Chlamydomonas reinhardtii HOM05D005666 ORTHO05D143906 7.8e-10 70.1 585 21.9
SEGI_03684 Sequoiadendron giganteum HOM05D005666 ORTHO05D007183 1.5e-08 65.9 72 43.1
FvH4_6g51172 Fragaria vesca HOM05D005666 ORTHO05D007183 1.6e-07 62.4 52 57.7
Thecc.05G064500 Theobroma cacao HOM05D005666 ORTHO05D007183 6.2e-07 60.5 103 37.9


User provided reference genes

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