Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aa31LG11G1470 Aethionema arabicum HOM05D007974 ORTHO05D010062 9.5e-83 310.1 150 100.0
AL8G38840 Arabidopsis lyrata HOM05D007974 ORTHO05D010062 1.5e-48 196.4 120 77.5
AT5G62065 Arabidopsis thaliana HOM05D007974 ORTHO05D010062 2.2e-47 192.6 120 76.7
C03p64890 Brassica napus HOM05D007974 ORTHO05D010062 1.6e-45 186.4 116 73.3
BolC3t18751H Brassica oleracea HOM05D007974 ORTHO05D010062 1.6e-45 186.4 116 73.3
Carub.0008s2274 Capsella rubella HOM05D007974 ORTHO05D010062 1.6e-45 186.4 116 76.7
A06p28760 Brassica napus HOM05D007974 ORTHO05D010062 4.6e-45 184.9 118 74.6
BraA06t25817Z Brassica rapa HOM05D007974 ORTHO05D010062 6.0e-45 184.5 118 74.6
Thhalv10005335m.g Eutrema salsugineum HOM05D007974 ORTHO05D010062 1.3e-44 183.3 119 73.9
BcaB02g09619 Brassica carinata HOM05D007974 ORTHO05D010062 3.0e-44 182.2 116 74.1
CARHR275850 Cardamine hirsuta HOM05D007974 ORTHO05D010062 1.5e-43 179.9 116 75.0
Sp2g25230 Schrenkiella parvula HOM05D007974 ORTHO05D010062 1.4e-41 173.3 97 79.4
THA.LOC104820164 Tarenaya hassleriana HOM05D007974 ORTHO05D010062 1.7e-39 166.4 104 70.2
Atru.chr1.506 Acer truncatum HOM05D007974 ORTHO05D010062 3.8e-31 138.7 109 55.0
CiPaw.04G066500 Carya illinoinensis HOM05D007974 ORTHO05D010062 4.2e-30 135.2 111 56.8
CSS0036952 Camellia sinensis var. sinensis HOM05D007974 ORTHO05D010062 2.1e-29 132.9 94 63.8
Actinidia34090 Actinidia chinensis HOM05D007974 ORTHO05D010062 4.6e-29 131.7 101 59.4
ECA233G5549 Erigeron canadensis HOM05D007974 ORTHO05D010062 4.6e-29 131.7 107 58.9
HanXRQChr13g0393691 Helianthus annuus HOM05D007974 ORTHO05D010062 6.0e-29 131.3 107 57.0
QL09p014742 Quercus lobata HOM05D007974 ORTHO05D010062 6.0e-29 131.3 112 53.6
Lsat_1_v5_gn_8_6981 Lactuca sativa HOM05D007974 ORTHO05D010062 7.9e-29 131.0 109 56.9
Dinv28469 Davidia involucrata HOM05D007974 ORTHO05D010062 1.0e-28 130.6 108 58.3
Oeu022576.1 Olea europaea HOM05D007974 ORTHO05D010062 1.8e-28 129.8 92 64.1
Eucgr.K00232 Eucalyptus grandis HOM05D007974 ORTHO05D010062 2.3e-28 129.4 114 50.9
Eucgr.L02686 Eucalyptus grandis HOM05D007974 ORTHO05D010062 2.3e-28 129.4 114 50.9
GSVIVG01010603001 Vitis vinifera HOM05D007974 ORTHO05D010062 5.1e-28 128.3 96 55.2
Thecc.03G172000 Theobroma cacao HOM05D007974 ORTHO05D010062 8.7e-28 127.5 93 60.2
Nn6g34222 Nelumbo nucifera HOM05D007974 ORTHO05D010062 1.1e-27 127.1 100 57.0
Nitab4.5_0004843g0030 Nicotiana tabacum HOM05D007974 ORTHO05D010062 1.1e-27 127.1 91 61.5
DCAR_018180 Daucus carota HOM05D007974 ORTHO05D010062 1.5e-27 126.7 112 55.4
Actinidia32884 Actinidia chinensis HOM05D007974 ORTHO05D010062 1.9e-27 126.3 101 58.4
Duzib068G0871 Durio zibethinus HOM05D007974 ORTHO05D010062 1.9e-27 126.3 100 57.0
Nitab4.5_0002107g0020 Nicotiana tabacum HOM05D007974 ORTHO05D010062 1.9e-27 126.3 111 54.1
Ciclev10006787m.g Citrus clementina HOM05D007974 ORTHO05D010062 3.3e-27 125.6 89 58.4
Manes.06G145100 Manihot esculenta HOM05D007974 ORTHO05D010062 3.3e-27 125.6 105 52.4
Prupe.2G291200 Prunus persica HOM05D007974 ORTHO05D010062 3.3e-27 125.6 103 54.4
CiPaw.03G103600 Carya illinoinensis HOM05D007974 ORTHO05D010062 7.4e-27 124.4 101 54.5
Solyc03g026090.4 Solanum lycopersicum HOM05D007974 ORTHO05D010062 7.4e-27 124.4 92 60.9
Hma1.2p1_0270F.1_g108330 Hydrangea macrophylla HOM05D007974 ORTHO05D010062 1.3e-26 123.6 92 57.6
Aqoxy5G03970 Aquilegia oxysepala HOM05D007974 ORTHO05D010062 1.6e-26 123.2 100 53.0
Rhsim03G0178300 Rhododendron simsii HOM05D007974 ORTHO05D010062 1.6e-26 123.2 113 55.8
PGSC0003DMG400014320 Solanum tuberosum HOM05D007974 ORTHO05D010062 1.6e-26 123.2 111 55.0
MSTRG.8445 Avicennia marina HOM05D007974 ORTHO05D010062 2.8e-26 122.5 108 55.6
EL10Ac3g05720 Beta vulgaris HOM05D007974 ORTHO05D010062 1.4e-25 120.2 121 48.8
CAN.G769.6 Capsicum annuum HOM05D007974 ORTHO05D010062 1.4e-25 120.2 112 52.7
Migut.F01135 Erythranthe guttata HOM05D007974 ORTHO05D010062 1.4e-25 120.2 91 59.3
Sopen03g004930 Solanum pennellii HOM05D007974 ORTHO05D010062 1.4e-25 120.2 112 50.0
Cpa.g.sc107.23 Carica papaya HOM05D007974 ORTHO05D010062 1.8e-25 119.8 107 49.5
MBI12_g15161_MAGBIO Magnolia biondii HOM05D007974 ORTHO05D010062 1.8e-25 119.8 108 49.1
MD01G1197800 Malus domestica HOM05D007974 ORTHO05D010062 4.0e-25 118.6 112 50.9
Glyma.20G156300 Glycine max HOM05D007974 ORTHO05D010062 9.0e-25 117.5 110 47.3
arahy.Tifrunner.gnm1.ann1.G5CYYB Arachis hypogaea HOM05D007974 ORTHO05D010062 1.5e-24 116.7 113 47.8
Sc19g0000020 Simmondsia chinensis HOM05D007974 ORTHO05D010062 1.5e-24 116.7 99 55.6
Potri.012G139700 Populus trichocarpa HOM05D007974 ORTHO05D010062 5.8e-24 114.8 111 49.5
COL.COLO4_14276 Corchorus olitorius HOM05D000659 ORTHO05D000505 1.0e-23 114.0 113 50.4
Sc19g0001640 Simmondsia chinensis HOM05D007974 ORTHO05D010062 1.3e-23 113.6 113 50.4
LjContig00238g0026064 Lotus japonicus HOM05D007974 ORTHO05D010062 8.4e-23 110.9 117 44.4
Phvul.007G067200 Phaseolus vulgaris HOM05D007974 ORTHO05D010062 1.4e-22 110.2 112 43.8
Gohir.A12G260000 Gossypium hirsutum HOM05D007974 ORTHO05D010062 1.9e-22 109.8 113 47.8
VMungo0720G1552 Vigna mungo HOM05D007974 ORTHO05D010062 1.9e-22 109.8 112 43.8
FAN10G0057 Fragaria x ananassa HOM05D007974 ORTHO05D010062 4.2e-22 108.6 113 46.9
RcHm_v2.0_Chr1g0376841 Rosa chinensis HOM05D007974 ORTHO05D010062 4.2e-22 108.6 112 47.3
Glyma.10G238250 Glycine max HOM05D007974 ORTHO05D010062 7.1e-22 107.8 93 49.5
FvH4_7g29100 Fragaria vesca HOM05D007974 ORTHO05D010062 1.6e-21 106.7 113 46.0
Gohir.D12G260800 Gossypium hirsutum HOM05D007974 ORTHO05D010062 1.6e-21 106.7 113 46.9
FAN03G0127 Fragaria x ananassa HOM05D007974 ORTHO05D010062 2.7e-21 105.9 113 46.9
Sabra12G0104700 Salix brachista HOM05D000659 ORTHO05D000505 3.5e-21 105.5 90 51.1
TPR.G17393 Trifolium pratense HOM05D007974 ORTHO05D010062 3.5e-21 105.5 110 45.5
FAN06G2079 Fragaria x ananassa HOM05D007974 ORTHO05D010062 6.0e-21 104.8 113 45.1
Gorai.008G279400 Gossypium raimondii HOM05D007974 ORTHO05D010062 6.0e-21 104.8 122 45.1
Medtr1g101320 Medicago truncatula HOM05D007974 ORTHO05D010062 6.0e-21 104.8 100 51.0
PGR142G2606 Punica granatum HOM05D007974 ORTHO05D010062 6.0e-21 104.8 117 41.0
Cfa008290 Carpinus fangiana HOM05D007974 ORTHO05D010062 7.9e-21 104.4 92 51.1
ATR0757G011 Amborella trichopoda HOM05D007974 ORTHO05D010062 1.1e-19 100.5 119 40.3
FAN03G1543 Fragaria x ananassa HOM05D007974 ORTHO05D010062 1.9e-19 99.8 113 45.1
Lsat_1_v5_gn_2_131621 Lactuca sativa HOM05D007974 ORTHO05D010062 2.2e-15 86.3 101 45.5
Gohir.D11G325151 Gossypium hirsutum HOM05D007974 ORTHO05D010062 3.6e-13 79.0 81 44.4
Actinidia03112 Actinidia chinensis HOM05D007974 ORTHO05D010062 1.4e-12 77.0 117 37.6
CSS0044170 Camellia sinensis var. sinensis HOM05D000275 ORTHO05D000181 2.4e-09 66.2 116 31.9
Potri.015G142100 Populus trichocarpa HOM05D007974 ORTHO05D010062 5.3e-09 65.1 79 39.2
Thecc.04G152500 Theobroma cacao HOM05D000275 ORTHO05D000181 2.6e-08 62.8 114 32.5
Rhsim07G0048700 Rhododendron simsii HOM05D000275 ORTHO05D000181 3.4e-08 62.4 126 31.7
Medtr7g072993 Medicago truncatula HOM05D000275 ORTHO05D000181 1.3e-07 60.5 116 32.8
CsaV3_4G027160 Cucumis sativus L. HOM05D000275 ORTHO05D000181 8.5e-07 57.8 114 33.3
Medtr7g072900 Medicago truncatula HOM05D000275 ORTHO05D000181 8.5e-07 57.8 113 31.9
TWI38G1593 Tripterygium wilfordii HOM05D006508 ORTHO05D003378 8.5e-07 57.8 109 33.0
vmacro22473 Vaccinium macrocarpon HOM05D000275 ORTHO05D000181 8.5e-07 57.8 114 34.2
Actinidia31722 Actinidia chinensis HOM05D000275 ORTHO05D000181 1.1e-06 57.4 108 27.8
Lalb_Chr07g0190761 Lupinus albus HOM05D000275 ORTHO05D000181 3.2e-06 55.8 106 28.3
TWI38G1893 Tripterygium wilfordii HOM05D006508 ORTHO05D003378 7.2e-06 54.7 103 31.1
TWI53G0620 Tripterygium wilfordii HOM05D000275 ORTHO05D000181 7.2e-06 54.7 112 30.4
Glyma.03G040400 Glycine max HOM05D000275 ORTHO05D000181 9.4e-06 54.3 108 29.6


User provided reference genes

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