Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aa31LG11G13770 Aethionema arabicum HOM05D007430 ORTHO05D009322 3.2e-50 201.4 100 100.0
AL6G26650 Arabidopsis lyrata HOM05D007430 ORTHO05D009322 2.4e-42 175.3 100 84.0
AT5G15802 Arabidopsis thaliana HOM05D007430 ORTHO05D009322 2.4e-42 175.3 100 84.0
CARHR197520 Cardamine hirsuta HOM05D007430 ORTHO05D009322 1.7e-40 169.1 100 80.0
Thhalv10015108m.g Eutrema salsugineum HOM05D007430 ORTHO05D009322 2.5e-39 165.2 101 81.2
BcaC04g18935 Brassica carinata HOM05D007430 ORTHO05D009322 8.9e-37 156.8 103 75.7
C09p61270 Brassica napus HOM05D007430 ORTHO05D009322 8.9e-37 156.8 103 75.7
BolC9t58969H Brassica oleracea HOM05D007430 ORTHO05D009322 8.9e-37 156.8 103 75.7
Carub.0006s1396 Capsella rubella HOM05D007430 ORTHO05D009322 1.2e-36 156.4 100 76.0
A10p23220 Brassica napus HOM05D007430 ORTHO05D009322 2.6e-36 155.2 103 74.8
BraA10t44390Z Brassica rapa HOM05D007430 ORTHO05D009322 2.6e-36 155.2 103 74.8
Sp6g28310 Schrenkiella parvula HOM05D007430 ORTHO05D009322 3.2e-34 148.3 100 75.0
THA.LOC104820974 Tarenaya hassleriana HOM05D007430 ORTHO05D009322 2.3e-32 142.1 104 69.2
Lalb_Chr02g0158751 Lupinus albus HOM05D007430 ORTHO05D009322 4.8e-30 134.4 109 58.7
Prupe.3G249500 Prunus persica HOM05D007430 ORTHO05D009322 4.8e-30 134.4 110 60.0
Lj2g0026299 Lotus japonicus HOM05D007430 ORTHO05D009322 2.4e-29 132.1 109 57.8
RcHm_v2.0_Chr2g0164961 Rosa chinensis HOM05D007430 ORTHO05D009322 2.4e-29 132.1 111 58.6
VMungo0464G1827 Vigna mungo HOM05D007430 ORTHO05D009322 4.0e-29 131.3 109 57.8
Medtr6g015965 Medicago truncatula HOM05D007430 ORTHO05D009322 5.3e-29 131.0 109 56.9
CANSAT64G0392 Cannabis sativa HOM05D007430 ORTHO05D009322 1.2e-28 129.8 101 64.4
Ca_14394_v3 Cicer arietinum L. HOM05D007430 ORTHO05D009322 1.5e-28 129.4 109 56.0
HanXRQChr14g0452451 Helianthus annuus HOM05D007430 ORTHO05D009322 1.5e-28 129.4 106 57.5
TPR.G15952 Trifolium pratense HOM05D007430 ORTHO05D009322 1.5e-28 129.4 109 57.8
GSVIVG01037660001 Vitis vinifera HOM05D007430 ORTHO05D009322 2.6e-28 128.6 110 57.3
Eucgr.C00827 Eucalyptus grandis HOM05D007430 ORTHO05D009322 4.4e-28 127.9 110 56.4
EL10Ac8g20552 Beta vulgaris HOM05D007430 ORTHO05D009322 1.3e-27 126.3 106 56.6
CsaV3_4G010120 Cucumis sativus L. HOM05D007430 ORTHO05D009322 1.7e-27 125.9 107 56.1
FAN14G5598 Fragaria x ananassa HOM05D007430 ORTHO05D009322 1.7e-27 125.9 111 55.9
Hund13678 Selenicereus undatus HOM05D007430 ORTHO05D009322 2.2e-27 125.6 108 57.4
Gohir.D07G186800 Gossypium hirsutum HOM05D007430 ORTHO05D009322 2.9e-27 125.2 107 55.1
Gorai.001G207400 Gossypium raimondii HOM05D007430 ORTHO05D009322 2.9e-27 125.2 107 55.1
Sabra17G0085900 Salix brachista HOM05D007430 ORTHO05D009322 2.9e-27 125.2 108 56.5
Hma1.2p1_1502F.1_g287440 Hydrangea macrophylla HOM05D007430 ORTHO05D009322 3.8e-27 124.8 107 54.2
MD17G1065300 Malus domestica HOM05D007430 ORTHO05D009322 3.8e-27 124.8 109 56.0
Potri.017G099600 Populus trichocarpa HOM05D007430 ORTHO05D009322 4.9e-27 124.4 109 55.0
Thecc.04G105400 Theobroma cacao HOM05D007430 ORTHO05D009322 4.9e-27 124.4 108 57.4
FAN05G2487 Fragaria x ananassa HOM05D007430 ORTHO05D009322 6.4e-27 124.0 111 55.9
AUR62023164 Chenopodium quinoa HOM05D007430 ORTHO05D009322 8.4e-27 123.6 106 58.5
MELO3C032688.2 Cucumis melo HOM05D007430 ORTHO05D009322 8.4e-27 123.6 106 55.7
Gohir.A07G179900 Gossypium hirsutum HOM05D007430 ORTHO05D009322 1.1e-26 123.2 107 55.1
ECA238G2295 Erigeron canadensis HOM05D007430 ORTHO05D009322 1.4e-26 122.9 106 52.8
Phvul.004G041900 Phaseolus vulgaris HOM05D007430 ORTHO05D009322 1.4e-26 122.9 109 56.0
arahy.Tifrunner.gnm1.ann1.LXP3AQ Arachis hypogaea HOM05D007430 ORTHO05D009322 2.4e-26 122.1 112 50.9
arahy.Tifrunner.gnm1.ann1.T6F203 Arachis hypogaea HOM05D007430 ORTHO05D009322 2.4e-26 122.1 112 50.9
TWI34G0957 Tripterygium wilfordii HOM05D007430 ORTHO05D009322 2.4e-26 122.1 108 54.6
Dinv33859 Davidia involucrata HOM05D007430 ORTHO05D009322 3.2e-26 121.7 108 54.6
Phvul.004G042100 Phaseolus vulgaris HOM05D007430 ORTHO05D009322 4.2e-26 121.3 111 53.2
Duzib138G0563 Durio zibethinus HOM05D007430 ORTHO05D009322 5.4e-26 120.9 108 54.6
Aqoxy3G00539 Aquilegia oxysepala HOM05D007430 ORTHO05D009322 7.1e-26 120.6 108 55.6
Glyma.19G034200 Glycine max HOM05D007430 ORTHO05D009322 7.1e-26 120.6 109 52.3
Lsat_1_v5_gn_2_89680 Lactuca sativa HOM05D007430 ORTHO05D009322 1.2e-25 119.8 102 52.9
AUR62009486 Chenopodium quinoa HOM05D007430 ORTHO05D009322 1.6e-25 119.4 106 55.7
FAN09G2572 Fragaria x ananassa HOM05D007430 ORTHO05D009322 1.6e-25 119.4 111 54.1
ClCG07G016000 Citrullus lanatus HOM05D007430 ORTHO05D009322 2.1e-25 119.0 107 54.2
Cc01_g15140 Coffea canephora HOM05D007430 ORTHO05D009322 2.1e-25 119.0 104 58.7
QL02p065966 Quercus lobata HOM05D007430 ORTHO05D009322 2.7e-25 118.6 108 54.6
TAR371G1216 Trochodendron aralioides HOM05D007430 ORTHO05D009322 2.7e-25 118.6 109 55.0
CAN.G854.12 Capsicum annuum HOM05D007430 ORTHO05D009322 3.5e-25 118.2 98 56.1
Ciclev10013162m.g Citrus clementina HOM05D007430 ORTHO05D009322 3.5e-25 118.2 108 53.7
Sopen07g024280 Solanum pennellii HOM05D007430 ORTHO05D009322 3.5e-25 118.2 100 58.0
Manes.02G059000 Manihot esculenta HOM05D007430 ORTHO05D009322 4.6e-25 117.9 108 52.8
Oeu007080.1 Olea europaea HOM05D007430 ORTHO05D009322 4.6e-25 117.9 111 55.0
SGA_v2.0_scaffold148G36438 Striga asiatica HOM05D007430 ORTHO05D009322 6.0e-25 117.5 109 52.3
TAR629G2042 Trochodendron aralioides HOM05D007430 ORTHO05D009322 6.0e-25 117.5 108 51.9
vmacro05615 Vaccinium macrocarpon HOM05D007430 ORTHO05D009322 6.0e-25 117.5 101 59.4
PSO017G6770 Papaver somniferum HOM05D007430 ORTHO05D009322 7.8e-25 117.1 108 52.8
PSO478G2979 Papaver somniferum HOM05D007430 ORTHO05D009322 7.8e-25 117.1 108 51.9
PGSC0003DMG400006148 Solanum tuberosum HOM05D007430 ORTHO05D009322 7.8e-25 117.1 101 58.4
CSS0032789 Camellia sinensis var. sinensis HOM05D007430 ORTHO05D009322 1.0e-24 116.7 108 52.8
CSS0049466 Camellia sinensis var. sinensis HOM05D007430 ORTHO05D009322 1.0e-24 116.7 108 52.8
Sed0003360 Sechium edule HOM05D007430 ORTHO05D009322 1.0e-24 116.7 107 53.3
Atru.chr8.658 Acer truncatum HOM05D007430 ORTHO05D009322 1.7e-24 115.9 104 54.8
Actinidia36267 Actinidia chinensis HOM05D007430 ORTHO05D009322 1.7e-24 115.9 107 55.1
Os03g0414400 Oryza sativa ssp. japonica HOM05D007430 ORTHO05D009322 1.7e-24 115.9 109 51.4
Sc10g0000620 Simmondsia chinensis HOM05D007430 ORTHO05D009322 1.7e-24 115.9 111 50.5
Nn8g40106 Nelumbo nucifera HOM05D007430 ORTHO05D009322 3.0e-24 115.2 107 56.1
CiPaw.03G083500 Carya illinoinensis HOM05D007430 ORTHO05D009322 5.1e-24 114.4 109 52.3
DCAR_003124 Daucus carota HOM05D007430 ORTHO05D009322 6.6e-24 114.0 108 50.0
Solyc07g047840.2 Solanum lycopersicum HOM05D007430 ORTHO05D009322 6.6e-24 114.0 100 57.0
SalBow1G0910 Salvia bowleyana HOM05D000293 ORTHO05D000180 8.7e-24 113.6 97 56.7
PGR004G1880 Punica granatum HOM05D007430 ORTHO05D009322 1.9e-23 112.5 111 51.4
Migut.O00383 Erythranthe guttata HOM05D007430 ORTHO05D009322 3.3e-23 111.7 107 51.4
MSTRG.3403 Avicennia marina HOM05D007430 ORTHO05D009322 7.3e-23 110.5 108 50.9
ATR0559G319 Amborella trichopoda HOM05D007430 ORTHO05D009322 3.6e-22 108.2 106 51.9
FvH4_6g46430 Fragaria vesca HOM05D007430 ORTHO05D009322 4.8e-22 107.8 99 54.5
MBI16_g22331_MAGBIO Magnolia biondii HOM05D007430 ORTHO05D009322 6.2e-22 107.5 109 54.1
Duzib138G1572 Durio zibethinus HOM05D007430 ORTHO05D009322 8.1e-22 107.1 107 49.5
Cpa.g.sc14.221 Carica papaya HOM05D007430 ORTHO05D009322 1.4e-21 106.3 109 50.5
HPP92_007986 Vanilla planifolia HOM05D007430 ORTHO05D009322 1.8e-21 105.9 102 52.9
CDE09G0787 Ceratophyllum demersum HOM05D007430 ORTHO05D009322 4.0e-21 104.8 104 54.8
unitig_32.g10757 Utricularia gibba HOM05D000600 ORTHO05D000432 7.6e-20 100.5 105 54.3
Duzib133G1191 Durio zibethinus HOM05D007430 ORTHO05D009322 9.9e-20 100.1 72 66.7
Pp3c7_870 Physcomitrium patens HOM05D007430 ORTHO05D009322 4.9e-19 97.8 96 52.1
SEGI_38988 Sequoiadendron giganteum HOM05D007430 ORTHO05D009322 6.4e-19 97.4 103 45.6
MD09G1073800 Malus domestica HOM05D007430 ORTHO05D009322 8.4e-19 97.1 70 67.1
Psat1g066840 Pisum sativum HOM05D007430 ORTHO05D009322 1.9e-18 95.9 68 63.2
CDE02G4259 Ceratophyllum demersum HOM05D007430 ORTHO05D009322 5.4e-18 94.4 64 71.9
Nitab4.5_0000441g0090 Nicotiana tabacum HOM05D007430 ORTHO05D009322 7.1e-18 94.0 67 65.7
FAN02G0166 Fragaria x ananassa HOM05D007430 ORTHO05D009322 4.6e-17 91.3 99 51.5
Nitab4.5_0009877g0030 Nicotiana tabacum HOM05D007430 ORTHO05D009322 7.9e-17 90.5 75 61.3
Mapoly0015s0072 Marchantia polymorpha HOM05D007430 ORTHO05D009322 1.3e-14 83.2 96 45.8
AagrBONN_evm.TU.Sc2ySwM_228.315 Anthoceros agrestis HOM05D007430 ORTHO05D009322 1.8e-13 79.3 99 41.4
MBI16_g39931_MAGBIO Magnolia biondii HOM05D007430 ORTHO05D009322 8.4e-11 70.5 109 41.3
CBR_g37835 Chara braunii HOM05D007430 ORTHO05D009322 1.9e-07 59.3 64 40.6


User provided reference genes

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