Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aa31LG11G13710 Aethionema arabicum HOM05D005714 ORTHO05D006812 2.4e-182 642.1 349 100.0
CARHR197420 Cardamine hirsuta HOM05D005714 ORTHO05D006812 4.1e-161 571.6 349 88.5
Sp6g28230 Schrenkiella parvula HOM05D005714 ORTHO05D006812 1.4e-158 563.1 349 87.1
Thhalv10015850m.g Eutrema salsugineum HOM05D005714 ORTHO05D006812 7.9e-157 557.4 349 86.0
AL6G26770 Arabidopsis lyrata HOM05D005714 ORTHO05D006812 8.8e-156 553.9 349 86.8
AL6G26782 Arabidopsis lyrata HOM05D005714 ORTHO05D006812 8.8e-156 553.9 349 86.8
Carub.0006s1407 Capsella rubella HOM05D005714 ORTHO05D006812 5.7e-155 551.2 349 85.4
AT5G15880 Arabidopsis thaliana HOM05D005714 ORTHO05D006812 2.8e-154 548.9 349 85.7
BraA03t10072Z Brassica rapa HOM05D005714 ORTHO05D006812 8.8e-148 527.3 352 83.5
BraA03t10075Z Brassica rapa HOM05D005714 ORTHO05D006812 5.7e-147 524.6 352 83.5
C03p08640 Brassica napus HOM05D005714 ORTHO05D006812 7.4e-147 524.2 350 82.9
BolC3t13366H Brassica oleracea HOM05D005714 ORTHO05D006812 7.4e-147 524.2 350 82.9
BraA10t44382Z Brassica rapa HOM05D005714 ORTHO05D006812 2.2e-146 522.7 349 81.9
BolC3t13356H Brassica oleracea HOM05D005714 ORTHO05D006812 3.7e-146 521.9 349 82.2
A03p07460 Brassica napus HOM05D005714 ORTHO05D006812 8.2e-146 520.8 352 83.2
C03p08510 Brassica napus HOM05D005714 ORTHO05D006812 1.1e-145 520.4 349 82.2
BcaB08g36870 Brassica carinata HOM05D005714 ORTHO05D006812 1.4e-145 520.0 349 81.4
THA.LOC104802994 Tarenaya hassleriana HOM05D005714 ORTHO05D006812 4.0e-140 501.9 349 79.1
BcaB01g05015 Brassica carinata HOM05D005714 ORTHO05D006812 7.7e-136 487.6 347 79.3
BolC9t58957H Brassica oleracea HOM05D005714 ORTHO05D006812 2.0e-131 473.0 355 75.8
Thecc.04G144400 Theobroma cacao HOM05D005714 ORTHO05D006812 5.0e-111 405.2 351 66.4
Cpa.g.sc179.47 Carica papaya HOM05D005714 ORTHO05D006812 1.6e-109 400.2 349 65.0
Potri.017G110300 Populus trichocarpa HOM05D005714 ORTHO05D006812 4.4e-107 392.1 350 64.3
Sabra17G0092200 Salix brachista HOM05D005714 ORTHO05D006812 7.5e-107 391.3 350 64.0
Dinv33913 Davidia involucrata HOM05D005714 ORTHO05D006812 1.7e-106 390.2 351 65.5
CiPaw.03G006400 Carya illinoinensis HOM05D005714 ORTHO05D006812 1.0e-103 380.9 352 63.4
COL.COLO4_03920 Corchorus olitorius HOM05D005714 ORTHO05D006812 1.0e-103 380.9 350 64.0
Gohir.D11G174600 Gossypium hirsutum HOM05D005714 ORTHO05D006812 1.7e-103 380.2 352 61.1
Gorai.007G187100 Gossypium raimondii HOM05D005714 ORTHO05D006812 3.9e-103 379.0 352 61.4
CANSAT64G2721 Cannabis sativa HOM05D005714 ORTHO05D006812 7.3e-102 374.8 352 63.6
FvH4_6g45610 Fragaria vesca HOM05D005714 ORTHO05D006812 1.2e-101 374.0 352 62.5
Lj7A8G44 Lonicera japonica HOM05D005714 ORTHO05D006812 2.1e-101 373.2 351 64.1
Duzib138G1804 Durio zibethinus HOM05D005714 ORTHO05D006812 8.1e-101 371.3 351 60.7
Potri.004G105400 Populus trichocarpa HOM05D005714 ORTHO05D006812 1.1e-100 370.9 350 62.6
Oeu032870.1 Olea europaea HOM05D005714 ORTHO05D006812 1.8e-100 370.2 353 63.2
Manes.02G065100 Manihot esculenta HOM05D005714 ORTHO05D006812 5.2e-100 368.6 349 62.5
PGR042G2576 Punica granatum HOM05D005714 ORTHO05D006812 8.9e-100 367.9 351 62.4
MD09G1081200 Malus domestica HOM05D005714 ORTHO05D006812 3.4e-99 365.9 350 63.7
Eucgr.J01456 Eucalyptus grandis HOM05D005714 ORTHO05D006812 1.3e-98 364.0 354 60.5
Sed0016830 Sechium edule HOM05D005714 ORTHO05D006812 1.7e-98 363.6 350 60.9
Cfa007977 Carpinus fangiana HOM05D001801 ORTHO05D001739 6.4e-98 361.7 351 61.0
GSVIVG01036468001 Vitis vinifera HOM05D005714 ORTHO05D006812 1.9e-97 360.1 350 60.0
RcHm_v2.0_Chr2g0163761 Rosa chinensis HOM05D005714 ORTHO05D006812 2.4e-97 359.8 352 60.8
Medtr6g016870 Medicago truncatula HOM05D005714 ORTHO05D006812 9.2e-97 357.8 355 61.1
Actinidia36301 Actinidia chinensis HOM05D005714 ORTHO05D006812 2.7e-96 356.3 351 62.1
CsaV3_3G020470 Cucumis sativus L. HOM05D005714 ORTHO05D006812 3.5e-96 355.9 352 59.9
Nitab4.5_0000612g0140 Nicotiana tabacum HOM05D005714 ORTHO05D006812 4.6e-96 355.5 351 63.0
Peaxi162Scf00479g00037 Petunia axillaris HOM05D005714 ORTHO05D006812 4.6e-96 355.5 350 62.0
Rhsim10G0064900 Rhododendron simsii HOM05D005714 ORTHO05D006812 1.3e-95 354.0 364 61.3
CSS0016024 Camellia sinensis var. sinensis HOM05D005714 ORTHO05D006812 1.7e-95 353.6 351 61.3
CSS0020756 Camellia sinensis var. sinensis HOM05D005714 ORTHO05D006812 1.7e-95 353.6 351 61.3
MELO3C023776.2 Cucumis melo HOM05D005714 ORTHO05D006812 1.7e-95 353.6 359 58.8
Nn3g17645 Nelumbo nucifera HOM05D005714 ORTHO05D006812 3.9e-95 352.4 361 59.3
MD17G1072600 Malus domestica HOM05D005714 ORTHO05D006812 8.6e-95 351.3 350 62.0
Atru.BG.225.p Acer truncatum HOM05D005714 ORTHO05D006812 1.1e-94 350.9 351 61.0
Lalb_Chr21g0317991 Lupinus albus HOM05D005714 ORTHO05D006812 1.5e-94 350.5 352 60.5
Prupe.3G242300 Prunus persica HOM05D005714 ORTHO05D006812 2.5e-94 349.7 352 60.8
Sc10g0001430 Simmondsia chinensis HOM05D005714 ORTHO05D006812 9.5e-94 347.8 350 59.7
Migut.H00540 Erythranthe guttata HOM05D005714 ORTHO05D006812 2.8e-93 346.3 355 60.0
MSTRG.2945 Avicennia marina HOM05D005714 ORTHO05D006812 4.7e-93 345.5 355 58.9
ClCG05G011990 Citrullus lanatus HOM05D005714 ORTHO05D006812 6.2e-93 345.1 367 57.8
SGA_v2.0_scaffold204G41660 Striga asiatica HOM05D005714 ORTHO05D006812 6.2e-93 345.1 352 59.4
PGSC0003DMG400018763 Solanum tuberosum HOM05D005714 ORTHO05D006812 8.1e-93 344.7 352 60.2
Sabra04G0076700 Salix brachista HOM05D005714 ORTHO05D006812 1.1e-92 344.4 420 51.2
EL10Ac2g04627 Beta vulgaris HOM05D005714 ORTHO05D006812 1.4e-92 344.0 352 58.0
Ca_20731_v3 Cicer arietinum L. HOM05D005714 ORTHO05D006812 2.0e-91 340.1 354 59.3
SalBow1G2935 Salvia bowleyana HOM05D005714 ORTHO05D006812 3.4e-91 339.3 352 58.5
SalBow1G3421 Salvia bowleyana HOM05D005714 ORTHO05D006812 4.4e-91 339.0 352 58.2
Ah.10g037360 Amaranthus hybridus HOM05D005714 ORTHO05D006812 7.6e-91 338.2 340 57.4
Cc07_g04960 Coffea canephora HOM05D005714 ORTHO05D006812 7.6e-91 338.2 352 59.1
Phvul.004G049100 Phaseolus vulgaris HOM05D005714 ORTHO05D006812 9.9e-91 337.8 350 59.1
Hund16108 Selenicereus undatus HOM05D005714 ORTHO05D006812 6.4e-90 335.1 365 56.4
PSO063G3590 Papaver somniferum HOM05D005714 ORTHO05D006812 1.9e-89 333.6 356 59.0
QL02p053457 Quercus lobata HOM05D005714 ORTHO05D006812 3.2e-89 332.8 351 58.4
ECA232G3066 Erigeron canadensis HOM05D005714 ORTHO05D006812 4.1e-89 332.4 352 59.7
MBI15_g36941_MAGBIO Magnolia biondii HOM05D005714 ORTHO05D006812 6.0e-88 328.6 352 57.1
Nitab4.5_0003161g0010 Nicotiana tabacum HOM05D005714 ORTHO05D006812 7.8e-88 328.2 344 59.0
TPR.G9671 Trifolium pratense HOM05D005714 ORTHO05D006812 1.3e-87 327.4 354 57.6
CAN.G551.30 Capsicum annuum HOM05D005714 ORTHO05D006812 5.1e-87 325.5 350 58.3
FAN09G3422 Fragaria x ananassa HOM05D005714 ORTHO05D006812 5.6e-86 322.0 353 56.7
arahy.Tifrunner.gnm1.ann1.AEQW57 Arachis hypogaea HOM05D005714 ORTHO05D006812 7.3e-86 321.6 355 58.3
Aqoxy3G03832 Aquilegia oxysepala HOM05D005714 ORTHO05D006812 9.6e-86 321.2 351 57.0
CSS0044543 Camellia sinensis var. sinensis HOM05D005714 ORTHO05D006812 1.6e-85 320.5 352 57.4
CSS0047938 Camellia sinensis var. sinensis HOM05D005714 ORTHO05D006812 1.6e-85 320.5 352 57.4
Ciclev10012317m.g Citrus clementina HOM05D005714 ORTHO05D006812 2.0e-83 313.5 301 62.5
Lj2g0024465 Lotus japonicus HOM05D005714 ORTHO05D006812 8.4e-82 308.1 335 57.6
TWI74G1644 Tripterygium wilfordii HOM05D005714 ORTHO05D006812 2.4e-81 306.6 349 55.0
arahy.Tifrunner.gnm1.ann1.R8VTVZ Arachis hypogaea HOM05D005714 ORTHO05D006812 9.3e-81 304.7 374 54.8
PSO782G2399 Papaver somniferum HOM05D005714 ORTHO05D006812 9.3e-81 304.7 342 56.7
HanXRQChr15g0490211 Helianthus annuus HOM05D005714 ORTHO05D006812 3.5e-80 302.8 351 57.0
vmacro05584 Vaccinium macrocarpon HOM05D005714 ORTHO05D006812 1.3e-79 300.8 400 52.0
Lsat_1_v5_gn_4_175801 Lactuca sativa HOM05D005714 ORTHO05D006812 2.3e-79 300.1 296 61.5
Os09g0108400 Oryza sativa ssp. japonica HOM05D005714 ORTHO05D006812 4.5e-75 285.8 352 50.9
HPP92_027404 Vanilla planifolia HOM05D005714 ORTHO05D006812 2.2e-74 283.5 355 52.4
Gohir.A11G168300 Gossypium hirsutum HOM05D005714 ORTHO05D006812 1.2e-72 277.7 252 62.7
CDE02G2817 Ceratophyllum demersum HOM05D005714 ORTHO05D006812 1.5e-70 270.8 383 49.1
unitig_899.g15126 Utricularia gibba HOM05D005714 ORTHO05D006812 1.2e-64 251.1 352 50.0
A10p17320 Brassica napus HOM05D000327 ORTHO05D006812 5.6e-62 242.3 230 64.3
Actinidia18116 Actinidia chinensis HOM05D005714 ORTHO05D006812 3.7e-61 239.6 352 50.3
Psat1g062640 Pisum sativum HOM05D005714 ORTHO05D006812 2.1e-56 223.8 232 58.6
Zm00001eb208920 Zea mays HOM05D005714 ORTHO05D006812 3.5e-56 223.0 333 45.6
FAN05G0119 Fragaria x ananassa HOM05D005714 ORTHO05D006812 1.9e-54 217.2 201 62.2
BcaC04g18926 Brassica carinata HOM05D005714 ORTHO05D006812 2.0e-51 207.2 324 46.0
VMungo0464G1377 Vigna mungo HOM05D005714 ORTHO05D006812 1.3e-50 204.5 234 54.7
Solyc03g046260.2 Solanum lycopersicum HOM05D005714 ORTHO05D006812 1.3e-45 188.0 229 53.3
Cfa007975 Carpinus fangiana HOM05D005714 ORTHO05D006812 2.2e-45 187.2 316 43.0
TAR622G1272 Trochodendron aralioides HOM05D005714 ORTHO05D006812 6.3e-45 185.7 194 58.2
Glyma.19G041200 Glycine max HOM05D005714 ORTHO05D006812 6.9e-44 182.2 181 60.2
C09p61160 Brassica napus HOM05D005714 ORTHO05D006812 4.5e-43 179.5 113 84.1
RcHm_v2.0_Chr2g0163701 Rosa chinensis HOM05D005714 ORTHO05D006812 1.7e-42 177.6 142 68.3
AUR62014554 Chenopodium quinoa HOM05D005714 ORTHO05D006812 1.0e-39 168.3 235 48.1
C09p61150 Brassica napus HOM05D005714 ORTHO05D006812 1.1e-38 164.9 101 83.2
AUR62008947 Chenopodium quinoa HOM05D005714 ORTHO05D006812 1.3e-37 161.4 237 45.6
ATR0752G125 Amborella trichopoda HOM05D005714 ORTHO05D006812 1.5e-35 154.5 133 63.9
MD17G1072400 Malus domestica HOM05D005714 ORTHO05D006812 1.5e-35 154.5 201 51.7
Pp3c1_6350 Physcomitrium patens HOM05D005714 ORTHO05D006812 2.0e-35 154.1 377 35.8
AagrBONN_evm.TU.Sc2ySwM_344.4539 Anthoceros agrestis HOM05D005714 ORTHO05D006812 2.2e-34 150.6 295 36.9
BcaB07g33635 Brassica carinata HOM05D005714 ORTHO05D006812 8.8e-31 138.7 123 64.2
SMO139G0044 Selaginella moellendorffii HOM05D005714 ORTHO05D006812 2.8e-29 133.7 290 37.6
BcaB08g36868 Brassica carinata HOM05D005714 ORTHO05D006812 9.1e-28 128.6 122 68.0
Sopen03g009720 Solanum pennellii HOM05D005714 ORTHO05D006812 4.5e-27 126.3 96 69.8
ATR0752G036 Amborella trichopoda HOM05D005714 ORTHO05D006812 2.2e-26 124.0 229 41.9
Mapoly0066s0019 Marchantia polymorpha HOM05D005714 ORTHO05D006812 2.3e-23 114.0 370 30.3
SMO145G0024 Selaginella moellendorffii HOM05D005714 ORTHO05D006812 6.3e-21 105.9 279 37.6
RcHm_v2.0_Chr2g0163721 Rosa chinensis HOM05D005714 ORTHO05D006812 7.7e-19 99.0 71 71.8
Medtr3g067495 Medicago truncatula HOM05D005714 ORTHO05D006812 2.9e-18 97.1 92 57.6
BcaB01g04945 Brassica carinata HOM05D004183 ORTHO05D005022 3.0e-15 87.0 103 55.3
RcHm_v2.0_Chr2g0163711 Rosa chinensis HOM05D005714 ORTHO05D006812 2.0e-14 84.3 77 61.0
SEGI_16525 Sequoiadendron giganteum HOM05D005714 ORTHO05D006812 1.1e-12 78.6 95 45.3
SEGI_18448 Sequoiadendron giganteum HOM05D005714 ORTHO05D006812 1.1e-12 78.6 225 32.9
BolC3t18733H Brassica oleracea HOM05D005714 ORTHO05D006812 3.5e-11 73.6 45 77.8
RcHm_v2.0_Chr2g0163621 Rosa chinensis HOM05D005714 ORTHO05D006812 9.5e-09 65.5 87 48.3
SGA_v2.0_scaffold254G45250 Striga asiatica HOM05D005714 ORTHO05D051379 6.1e-08 62.8 46 73.9


User provided reference genes

Program Settings