Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aa31LG11G13550 Aethionema arabicum HOM05D007149 ORTHO05D008956 1.2e-46 189.5 96 100.0
A10p23000 Brassica napus HOM05D007149 ORTHO05D008956 8.9e-42 173.3 94 89.4
BraA10t44369Z Brassica rapa HOM05D007149 ORTHO05D008956 8.9e-42 173.3 94 89.4
BcaC04g18912 Brassica carinata HOM05D007149 ORTHO05D008956 1.2e-41 172.9 94 88.3
C09p60970 Brassica napus HOM05D007149 ORTHO05D008956 1.2e-41 172.9 94 88.3
BolC9t58944H Brassica oleracea HOM05D007149 ORTHO05D008956 1.2e-41 172.9 94 88.3
CARHR197250 Cardamine hirsuta HOM05D007149 ORTHO05D008956 2.0e-41 172.2 96 86.5
Thhalv10015129m.g Eutrema salsugineum HOM05D007149 ORTHO05D008956 2.0e-41 172.2 96 87.5
Sp6g28070 Schrenkiella parvula HOM05D007149 ORTHO05D008956 2.6e-41 171.8 96 87.5
AL6G26940 Arabidopsis lyrata HOM05D007149 ORTHO05D008956 1.7e-40 169.1 96 85.4
AT5G16060 Arabidopsis thaliana HOM05D007149 ORTHO05D008956 3.7e-40 167.9 96 85.4
Carub.0006s1425 Capsella rubella HOM05D007149 ORTHO05D008956 6.3e-40 167.2 96 84.4
BcaB08g36883 Brassica carinata HOM05D007149 ORTHO05D008956 1.1e-39 166.4 93 86.0
THA.LOC104827153 Tarenaya hassleriana HOM05D007149 ORTHO05D008956 1.1e-36 156.4 90 84.4
THA.LOC104803005 Tarenaya hassleriana HOM05D007149 ORTHO05D008956 3.3e-36 154.8 90 84.4
Aa31LG2G17140 Aethionema arabicum HOM05D007149 ORTHO05D008956 4.3e-36 154.5 77 100.0
CSS0003707 Camellia sinensis var. sinensis HOM05D007149 ORTHO05D008956 9.5e-36 153.3 87 83.9
Ciclev10013207m.g Citrus clementina HOM05D007149 ORTHO05D008956 1.6e-35 152.5 89 79.8
HanXRQChr12g0376461 Helianthus annuus HOM05D007149 ORTHO05D008956 2.1e-35 152.1 87 83.9
Ah.10g037580 Amaranthus hybridus HOM05D007149 ORTHO05D008956 2.8e-35 151.8 89 83.1
CSS0003918 Camellia sinensis var. sinensis HOM05D007149 ORTHO05D008956 3.6e-35 151.4 87 82.8
Actinidia15873 Actinidia chinensis HOM05D007149 ORTHO05D008956 6.1e-35 150.6 86 82.6
CANSAT64G1005 Cannabis sativa HOM05D007149 ORTHO05D008956 1.0e-34 149.8 89 79.8
Cpa.g.sc179.16 Carica papaya HOM05D007149 ORTHO05D008956 1.0e-34 149.8 90 80.0
TWI74G0718 Tripterygium wilfordii HOM05D007149 ORTHO05D008956 1.0e-34 149.8 88 79.5
COL.COLO4_16183 Corchorus olitorius HOM05D007149 ORTHO05D008956 1.4e-34 149.4 89 79.8
Gohir.D07G076000 Gossypium hirsutum HOM05D007149 ORTHO05D008956 1.4e-34 149.4 89 78.7
CDE11G0018 Ceratophyllum demersum HOM05D007149 ORTHO05D008956 1.8e-34 149.1 92 79.3
Dinv34841 Davidia involucrata HOM05D007149 ORTHO05D008956 1.8e-34 149.1 88 80.7
Gohir.A07G071500 Gossypium hirsutum HOM05D007149 ORTHO05D008956 1.8e-34 149.1 89 78.7
Gorai.001G080200 Gossypium raimondii HOM05D007149 ORTHO05D008956 1.8e-34 149.1 89 78.7
Lsat_1_v5_gn_3_78860 Lactuca sativa HOM05D007149 ORTHO05D008956 1.8e-34 149.1 86 82.6
Manes.01G108800 Manihot esculenta HOM05D007149 ORTHO05D008956 1.8e-34 149.1 91 75.8
Nn4g23775 Nelumbo nucifera HOM05D007149 ORTHO05D008956 1.8e-34 149.1 88 79.5
Hund13727 Selenicereus undatus HOM05D007149 ORTHO05D008956 4.0e-34 147.9 90 77.8
Thecc.04G136400 Theobroma cacao HOM05D007149 ORTHO05D008956 4.0e-34 147.9 89 79.8
Actinidia36312 Actinidia chinensis HOM05D007149 ORTHO05D008956 5.2e-34 147.5 87 79.3
Cfa007939 Carpinus fangiana HOM05D007149 ORTHO05D008956 5.2e-34 147.5 89 77.5
CiPaw.04G040600 Carya illinoinensis HOM05D007149 ORTHO05D008956 5.2e-34 147.5 93 76.3
Hma1.2p1_0550F.1_g177300 Hydrangea macrophylla HOM05D007149 ORTHO05D008956 6.8e-34 147.1 88 79.5
Cc07_g08920 Coffea canephora HOM05D007149 ORTHO05D008956 8.9e-34 146.7 86 82.6
Ca_13737_v3 Cicer arietinum L. HOM05D007149 ORTHO05D008956 1.2e-33 146.4 86 80.2
CiPaw.03G060400 Carya illinoinensis HOM05D007149 ORTHO05D008956 1.5e-33 146.0 92 77.2
Migut.H00206 Erythranthe guttata HOM05D007149 ORTHO05D008956 1.5e-33 146.0 93 76.3
Os03g0257900 Oryza sativa ssp. japonica HOM05D007149 ORTHO05D008956 1.5e-33 146.0 86 81.4
QL02p051591 Quercus lobata HOM05D007149 ORTHO05D008956 1.5e-33 146.0 89 77.5
Medtr0024s0060 Medicago truncatula HOM05D007149 ORTHO05D008956 4.4e-33 144.4 86 80.2
Solyc02g063085.1 Solanum lycopersicum HOM05D007149 ORTHO05D008956 4.4e-33 144.4 88 78.4
Eucgr.J01478 Eucalyptus grandis HOM05D007149 ORTHO05D008956 5.8e-33 144.1 86 80.2
vmacro05569 Vaccinium macrocarpon HOM05D007149 ORTHO05D008956 5.8e-33 144.1 87 77.0
EL10Ac2g04594 Beta vulgaris HOM05D007149 ORTHO05D008956 7.5e-33 143.7 89 78.7
CAN.G953.15 Capsicum annuum HOM05D007149 ORTHO05D008956 9.8e-33 143.3 88 78.4
Phvul.004G064400 Phaseolus vulgaris HOM05D007149 ORTHO05D008956 9.8e-33 143.3 83 79.5
FvH4_6g45250 Fragaria vesca HOM05D007149 ORTHO05D008956 1.3e-32 142.9 92 70.7
FAN09G4869 Fragaria x ananassa HOM05D007149 ORTHO05D008956 1.3e-32 142.9 92 70.7
FAN14G5255 Fragaria x ananassa HOM05D007149 ORTHO05D008956 1.3e-32 142.9 92 70.7
Peaxi162Scf00501g00121 Petunia axillaris HOM05D007149 ORTHO05D008956 1.3e-32 142.9 88 77.3
HPP92_011090 Vanilla planifolia HOM05D007149 ORTHO05D008956 1.3e-32 142.9 88 76.1
Sabra17G0093700 Salix brachista HOM05D007149 ORTHO05D008956 1.7e-32 142.5 86 76.7
RcHm_v2.0_Chr2g0162971 Rosa chinensis HOM05D007149 ORTHO05D008956 2.2e-32 142.1 92 69.6
Atru.chr8.867 Acer truncatum HOM05D007149 ORTHO05D008956 2.9e-32 141.7 89 77.5
DCAR_017207 Daucus carota HOM05D007149 ORTHO05D008956 2.9e-32 141.7 91 73.6
Potri.017G113401 Populus trichocarpa HOM05D007149 ORTHO05D008956 2.9e-32 141.7 86 77.9
unitig_899.g14509 Utricularia gibba HOM05D007149 ORTHO05D008956 2.9e-32 141.7 88 78.4
Zm00001eb011230 Zea mays HOM05D007149 ORTHO05D008956 2.9e-32 141.7 86 77.9
ATR0665G039 Amborella trichopoda HOM05D007149 ORTHO05D008956 3.7e-32 141.4 86 76.7
Glyma.19G046200 Glycine max HOM05D007149 ORTHO05D008956 3.7e-32 141.4 83 79.5
Lalb_Chr04g0257361 Lupinus albus HOM05D007149 ORTHO05D008956 3.7e-32 141.4 89 75.3
PGR004G0481 Punica granatum HOM05D007149 ORTHO05D008956 1.4e-31 139.4 83 77.1
Lj2g0020616 Lotus japonicus HOM05D007149 ORTHO05D008956 3.2e-31 138.3 89 74.2
MD07G1095900 Malus domestica HOM05D007149 ORTHO05D008956 4.1e-31 137.9 89 74.2
Sc11g0008240 Simmondsia chinensis HOM05D007149 ORTHO05D008956 4.1e-31 137.9 86 76.7
GSVIVG01031069001 Vitis vinifera HOM05D007149 ORTHO05D008956 4.1e-31 137.9 86 75.6
Aqoxy3G03934 Aquilegia oxysepala HOM05D007149 ORTHO05D008956 9.2e-31 136.7 88 73.9
Psat1g079040 Pisum sativum HOM05D007149 ORTHO05D008956 9.2e-31 136.7 86 75.6
CsaV3_5G039180 Cucumis sativus L. HOM05D007149 ORTHO05D008956 1.2e-30 136.3 86 75.6
MD17G1105000 Malus domestica HOM05D007149 ORTHO05D008956 1.2e-30 136.3 89 73.0
PSO782G5258 Papaver somniferum HOM05D007149 ORTHO05D008956 2.7e-30 135.2 85 74.1
FAN09G3419 Fragaria x ananassa HOM05D007149 ORTHO05D008956 4.6e-30 134.4 103 63.1
MELO3C022093.2 Cucumis melo HOM05D007149 ORTHO05D008956 6.0e-30 134.0 86 73.3
Sed0025185 Sechium edule HOM05D007149 ORTHO05D008956 1.0e-29 133.3 87 73.6
PSO063G3907 Papaver somniferum HOM05D007149 ORTHO05D008956 1.7e-29 132.5 85 72.9
Duzib133G0440 Durio zibethinus HOM05D007149 ORTHO05D008956 1.1e-28 129.8 124 56.5
FAN02G3200 Fragaria x ananassa HOM05D007149 ORTHO05D008956 1.9e-28 129.0 104 59.6
Carub.0055s0008 Capsella rubella HOM05D007149 ORTHO05D008956 2.8e-27 125.2 68 86.8
Nn3g17784 Nelumbo nucifera HOM05D007149 ORTHO05D008956 6.2e-27 124.0 75 74.7
Haze_14138 Corylus avellana HOM05D007149 ORTHO05D008956 1.5e-25 119.4 67 83.6
TPR.G32450 Trifolium pratense HOM05D007149 ORTHO05D008956 1.5e-25 119.4 135 51.9
arahy.Tifrunner.gnm1.ann1.2T9F1Z Arachis hypogaea HOM05D007149 ORTHO05D008956 4.4e-25 117.9 79 69.6
arahy.Tifrunner.gnm1.ann1.HVR4ZG Arachis hypogaea HOM05D007149 ORTHO05D008956 4.4e-25 117.9 79 69.6
PGSC0003DMG400024179 Solanum tuberosum HOM05D007149 ORTHO05D008956 5.8e-25 117.5 74 73.0
CDE05G2183 Ceratophyllum demersum HOM05D007149 ORTHO05D008956 7.5e-25 117.1 66 86.4
Nitab4.5_0001569g0020 Nicotiana tabacum HOM05D007149 ORTHO05D008956 2.9e-24 115.2 69 73.9
ECA246G4376 Erigeron canadensis HOM05D007149 ORTHO05D008956 3.7e-24 114.8 65 80.0
SalBow3G3356 Salvia bowleyana HOM05D007149 ORTHO05D008956 3.7e-24 114.8 66 81.8
HPP92_011107 Vanilla planifolia HOM05D007149 ORTHO05D008956 3.7e-24 114.8 69 78.3
AUR62014527 Chenopodium quinoa HOM05D007149 ORTHO05D008956 1.1e-23 113.2 68 76.5
AagrBONN_evm.TU.Sc2ySwM_228.1220 Anthoceros agrestis HOM05D007149 ORTHO05D008956 4.1e-23 111.3 79 63.3
SalBow6G3599 Salvia bowleyana HOM05D007149 ORTHO05D008956 1.2e-22 109.8 69 71.0
SHI30170 Sapria himalayana HOM05D007149 ORTHO05D008956 1.6e-22 109.4 65 78.5
Sopen02g014160 Solanum pennellii HOM05D007149 ORTHO05D008956 2.7e-22 108.6 67 73.1
ClCG11G005400 Citrullus lanatus HOM05D007149 ORTHO05D008956 4.6e-22 107.8 64 81.2
Prupe.3G238900 Prunus persica HOM05D007149 ORTHO05D008956 1.7e-21 105.9 68 70.6
Pp3c20_17910 Physcomitrium patens HOM05D007149 ORTHO05D008956 3.0e-21 105.1 85 60.0
SMO356G0237 Selaginella moellendorffii HOM05D007149 ORTHO05D008956 8.6e-21 103.6 77 62.3
Mapoly0073s0075 Marchantia polymorpha HOM05D007149 ORTHO05D008956 1.2e-17 93.2 65 63.1
RcHm_v2.0_Chr2g0163021 Rosa chinensis HOM05D007149 ORTHO05D008956 1.7e-13 79.3 65 61.5
SGA_v2.0_scaffold33G13472 Striga asiatica HOM05D007149 ORTHO05D008956 1.7e-13 79.3 45 75.6
Nitab4.5_0002288g0070 Nicotiana tabacum HOM05D007149 ORTHO05D008956 2.8e-11 72.0 86 48.8
MCO15G246 Micromonas commoda HOM05D007149 ORTHO05D008956 8.1e-11 70.5 71 47.9
PRCOL_00003753 Prasinoderma coloniale HOM05D007149 ORTHO05D008956 8.9e-10 67.0 70 48.6


User provided reference genes

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