Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aa31LG11G13320 Aethionema arabicum HOM05D003580 ORTHO05D004441 0.0e+00 2161.0 1103 100.0
CARHR197010 Cardamine hirsuta HOM05D003580 ORTHO05D004441 0.0e+00 1842.8 1108 85.8
Thhalv10012518m.g Eutrema salsugineum HOM05D003580 ORTHO05D004441 0.0e+00 1833.9 1104 85.4
Sp6g27860 Schrenkiella parvula HOM05D003580 ORTHO05D004441 0.0e+00 1833.9 1104 85.3
AL6G27200 Arabidopsis lyrata HOM05D003580 ORTHO05D004441 0.0e+00 1830.5 1102 85.9
Carub.0006s1449 Capsella rubella HOM05D003580 ORTHO05D004441 0.0e+00 1827.0 1104 85.3
AT5G16300 Arabidopsis thaliana HOM05D003580 ORTHO05D004441 0.0e+00 1803.1 1104 84.6
BolC9t58909H Brassica oleracea HOM05D003580 ORTHO05D004441 0.0e+00 1771.5 1105 82.8
BraA10t44342Z Brassica rapa HOM05D003580 ORTHO05D004441 0.0e+00 1755.3 1105 82.2
BcaB01g04993 Brassica carinata HOM05D003580 ORTHO05D004441 0.0e+00 1750.7 1103 82.4
A03p07660 Brassica napus HOM05D003580 ORTHO05D004441 0.0e+00 1729.1 1105 81.6
BraA03t10094Z Brassica rapa HOM05D003580 ORTHO05D004441 0.0e+00 1721.8 1105 81.4
C03p08900 Brassica napus HOM05D003580 ORTHO05D004441 0.0e+00 1721.1 1105 81.4
BolC3t13385H Brassica oleracea HOM05D003580 ORTHO05D004441 0.0e+00 1718.7 1105 81.4
C09p60740 Brassica napus HOM05D003580 ORTHO05D004441 0.0e+00 1695.6 1048 83.0
A10p22770 Brassica napus HOM05D003580 ORTHO05D004441 0.0e+00 1694.1 1047 82.8
THA.LOC104820933 Tarenaya hassleriana HOM05D003580 ORTHO05D004441 0.0e+00 1668.3 1109 79.1
Potri.010G177200 Populus trichocarpa HOM05D003580 ORTHO05D004441 0.0e+00 1455.3 1111 68.4
Ciclev10014110m.g Citrus clementina HOM05D003580 ORTHO05D004441 0.0e+00 1416.0 1108 68.4
Sabra10G0136200 Salix brachista HOM05D003580 ORTHO05D004441 0.0e+00 1409.0 1155 64.6
Manes.13G155600 Manihot esculenta HOM05D003580 ORTHO05D004441 0.0e+00 1404.4 1111 66.6
Potri.008G079700 Populus trichocarpa HOM05D003580 ORTHO05D004441 0.0e+00 1401.7 1111 66.2
TWI53G0960 Tripterygium wilfordii HOM05D003580 ORTHO05D004441 0.0e+00 1382.9 1105 66.1
QL01p005312 Quercus lobata HOM05D003580 ORTHO05D004441 0.0e+00 1378.6 1087 66.6
CiPaw.04G180400 Carya illinoinensis HOM05D003580 ORTHO05D004441 0.0e+00 1364.4 1088 66.5
Sabra08G0059400 Salix brachista HOM05D003580 ORTHO05D004441 0.0e+00 1348.6 1177 61.9
Gohir.D04G010100 Gossypium hirsutum HOM05D003580 ORTHO05D004441 0.0e+00 1335.9 1092 64.0
Gorai.012G011900 Gossypium raimondii HOM05D003580 ORTHO05D004441 0.0e+00 1334.7 1092 63.9
Gohir.A05G405500 Gossypium hirsutum HOM05D003580 ORTHO05D004441 0.0e+00 1326.6 1092 63.7
Cfa002307 Carpinus fangiana HOM05D003580 ORTHO05D004441 0.0e+00 1325.8 1088 64.9
Eucgr.G00871 Eucalyptus grandis HOM05D003580 ORTHO05D004441 0.0e+00 1322.0 1098 63.8
Gorai.009G355000 Gossypium raimondii HOM05D003580 ORTHO05D004441 0.0e+00 1322.0 1088 63.7
MELO3C008782.2 Cucumis melo HOM05D003580 ORTHO05D004441 0.0e+00 1320.1 1093 63.1
Gohir.A04G049300 Gossypium hirsutum HOM05D003580 ORTHO05D004441 0.0e+00 1317.8 1088 63.2
CsaV3_2G009280 Cucumis sativus L. HOM05D003580 ORTHO05D004441 0.0e+00 1315.8 1093 63.2
TAR362G0544 Trochodendron aralioides HOM05D003580 ORTHO05D004441 0.0e+00 1315.4 1083 63.3
TAR633G0565 Trochodendron aralioides HOM05D003580 ORTHO05D004441 0.0e+00 1315.4 1080 63.6
Gohir.D05G331100 Gossypium hirsutum HOM05D003580 ORTHO05D004441 0.0e+00 1315.1 1088 63.4
Thecc.05G131900 Theobroma cacao HOM05D003580 ORTHO05D004441 0.0e+00 1314.3 1091 63.8
ClCG11G011150 Citrullus lanatus HOM05D003580 ORTHO05D004441 0.0e+00 1310.4 1094 62.9
Actinidia22096 Actinidia chinensis HOM05D003580 ORTHO05D004441 0.0e+00 1304.7 1108 62.8
PGR042G2902 Punica granatum HOM05D003580 ORTHO05D004441 0.0e+00 1303.9 1088 63.0
arahy.Tifrunner.gnm1.ann1.U0AKQE Arachis hypogaea HOM05D003580 ORTHO05D004441 0.0e+00 1302.3 1088 64.4
arahy.Tifrunner.gnm1.ann1.TPGZ8P Arachis hypogaea HOM05D003580 ORTHO05D004441 0.0e+00 1299.3 1088 64.3
COL.COLO4_02821 Corchorus olitorius HOM05D003580 ORTHO05D004441 0.0e+00 1291.2 1115 61.3
Haze_24513 Corylus avellana HOM05D003580 ORTHO05D004441 0.0e+00 1285.8 1178 60.2
Sed0022441 Sechium edule HOM05D003580 ORTHO05D004441 0.0e+00 1282.7 1084 62.3
Nn5g28173 Nelumbo nucifera HOM05D003580 ORTHO05D004441 0.0e+00 1278.1 1080 62.0
VMungo0720G1645 Vigna mungo HOM05D003580 ORTHO05D004441 0.0e+00 1277.7 1105 61.9
Glyma.20G188500 Glycine max HOM05D003580 ORTHO05D004441 0.0e+00 1276.9 1105 62.4
Phvul.007G105200 Phaseolus vulgaris HOM05D003580 ORTHO05D004441 0.0e+00 1276.2 1105 62.6
Sed0017385 Sechium edule HOM05D003580 ORTHO05D004441 0.0e+00 1270.8 1096 61.1
Lalb_Chr02g0151301 Lupinus albus HOM05D003580 ORTHO05D004441 0.0e+00 1264.6 1111 61.8
Ca_10488_v3 Cicer arietinum L. HOM05D003580 ORTHO05D004441 0.0e+00 1262.3 1082 62.5
Nn1g09424 Nelumbo nucifera HOM05D003580 ORTHO05D004441 0.0e+00 1262.3 1083 60.8
Glyma.10G201900 Glycine max HOM05D003580 ORTHO05D004441 0.0e+00 1261.9 1105 61.6
Lj5g0021899 Lotus japonicus HOM05D003580 ORTHO05D004441 0.0e+00 1261.9 1107 61.4
Lalb_Chr21g0313231 Lupinus albus HOM05D003580 ORTHO05D004441 0.0e+00 1259.2 1117 61.6
Sopen03g039520 Solanum pennellii HOM05D003580 ORTHO05D004441 0.0e+00 1258.0 1097 60.7
CANSAT64G0454 Cannabis sativa HOM05D003580 ORTHO05D004441 0.0e+00 1255.4 1087 61.6
Solyc03g120700.3 Solanum lycopersicum HOM05D003580 ORTHO05D004441 0.0e+00 1255.0 1097 60.5
Psat6g176280 Pisum sativum HOM05D003580 ORTHO05D004441 0.0e+00 1254.6 1082 62.6
PGSC0003DMG400002624 Solanum tuberosum HOM05D003580 ORTHO05D004441 0.0e+00 1250.7 1097 60.6
Hund21939 Selenicereus undatus HOM05D003580 ORTHO05D004441 0.0e+00 1248.0 1094 61.4
Actinidia30566 Actinidia chinensis HOM05D003580 ORTHO05D004441 0.0e+00 1245.7 1108 61.1
GSVIVG01006267001 Vitis vinifera HOM05D003580 ORTHO05D004441 0.0e+00 1237.2 1069 61.8
vmacro09152 Vaccinium macrocarpon HOM05D003580 ORTHO05D004441 0.0e+00 1231.1 1227 56.0
Duzib140G0001 Durio zibethinus HOM05D003580 ORTHO05D004441 0.0e+00 1228.4 1092 60.5
Lj2A356T45 Lonicera japonica HOM05D003580 ORTHO05D004441 0.0e+00 1228.4 1084 60.0
AUR62000253 Chenopodium quinoa HOM05D003580 ORTHO05D004441 0.0e+00 1224.2 1094 61.2
EL10Ac4g10045 Beta vulgaris HOM05D003580 ORTHO05D004441 0.0e+00 1219.9 1096 61.1
PSO675G0774 Papaver somniferum HOM05D003580 ORTHO05D004441 0.0e+00 1214.1 1086 59.1
HanXRQChr01g0024861 Helianthus annuus HOM05D003580 ORTHO05D004441 0.0e+00 1211.8 1081 59.1
Rhsim04G0086300 Rhododendron simsii HOM05D003580 ORTHO05D004441 0.0e+00 1210.7 1181 57.7
Migut.J00662 Erythranthe guttata HOM05D003580 ORTHO05D004441 0.0e+00 1208.0 1102 57.5
HanXRQChr12g0356901 Helianthus annuus HOM05D003580 ORTHO05D004441 0.0e+00 1206.0 1083 58.6
Cc06_g21420 Coffea canephora HOM05D003580 ORTHO05D004441 0.0e+00 1204.9 1091 59.9
PSO732G0238 Papaver somniferum HOM05D003580 ORTHO05D004441 0.0e+00 1204.9 1109 58.1
PSO063G3475 Papaver somniferum HOM05D003580 ORTHO05D004441 0.0e+00 1200.7 1107 57.9
Prupe.1G575000 Prunus persica HOM05D003580 ORTHO05D004441 0.0e+00 1195.6 1110 59.5
Ah.04g159420 Amaranthus hybridus HOM05D003580 ORTHO05D004441 0.0e+00 1194.9 1094 59.9
DCAR_019887 Daucus carota HOM05D003580 ORTHO05D004441 0.0e+00 1189.5 1098 57.2
ECA248G2481 Erigeron canadensis HOM05D003580 ORTHO05D004441 0.0e+00 1188.3 1084 57.0
Lsat_1_v5_gn_1_58860 Lactuca sativa HOM05D003580 ORTHO05D004441 0.0e+00 1186.4 1097 58.4
Dinv20243 Davidia involucrata HOM05D003580 ORTHO05D004441 0.0e+00 1183.3 1096 58.6
MBI18_g04901_MAGBIO Magnolia biondii HOM05D003580 ORTHO05D004441 0.0e+00 1181.0 1085 57.9
MD08G1237500 Malus domestica HOM05D003580 ORTHO05D004441 0.0e+00 1178.7 1107 59.1
Aqoxy6G00271 Aquilegia oxysepala HOM05D003580 ORTHO05D004441 0.0e+00 1175.6 1091 57.1
AUR62006600 Chenopodium quinoa HOM05D003580 ORTHO05D004441 0.0e+00 1172.9 1093 59.3
CAN.G438.18 Capsicum annuum HOM05D003580 ORTHO05D004441 0.0e+00 1171.4 1034 59.8
RcHm_v2.0_Chr7g0220971 Rosa chinensis HOM05D003580 ORTHO05D004441 0.0e+00 1171.0 1093 60.2
MSTRG.19281 Avicennia marina HOM05D003580 ORTHO05D004441 0.0e+00 1169.8 1101 56.9
MD15G1429400 Malus domestica HOM05D003580 ORTHO05D004441 0.0e+00 1157.9 1112 58.2
Oeu011931.1 Olea europaea HOM05D003580 ORTHO05D004441 0.0e+00 1156.4 1093 57.3
TPR.G2546 Trifolium pratense HOM05D003580 ORTHO05D004441 0.0e+00 1152.1 1081 58.6
FAN18G2191 Fragaria x ananassa HOM05D003580 ORTHO05D004441 0.0e+00 1137.9 1096 58.6
Peaxi162Scf00076g00824 Petunia axillaris HOM05D003580 ORTHO05D004441 0.0e+00 1129.0 1110 55.9
FAN08G0025 Fragaria x ananassa HOM05D003580 ORTHO05D004441 0.0e+00 1124.0 1086 58.3
FAN04G1111 Fragaria x ananassa HOM05D003580 ORTHO05D004441 0.0e+00 1109.7 1086 58.0
Oeu055491.1 Olea europaea HOM05D003580 ORTHO05D004441 0.0e+00 1098.6 1033 57.3
CSS0030366 Camellia sinensis var. sinensis HOM05D003580 ORTHO05D004441 0.0e+00 1092.0 985 59.7
FAN13G3018 Fragaria x ananassa HOM05D003580 ORTHO05D004441 4.5e-307 1058.1 1027 57.9
Medtr1g492710 Medicago truncatula HOM05D003580 ORTHO05D004441 4.2e-305 1051.6 1113 53.1
unitig_749.g14304 Utricularia gibba HOM05D003580 ORTHO05D004441 2.1e-304 1049.3 1130 50.8
ATR0743G251 Amborella trichopoda HOM05D003580 ORTHO05D004441 5.4e-300 1034.6 1098 51.8
Sc16g0010760 Simmondsia chinensis HOM05D003580 ORTHO05D004441 2.6e-294 1015.8 921 58.2
FvH4_5g28760 Fragaria vesca HOM05D003580 ORTHO05D004441 3.0e-287 992.3 966 57.1
CDE04G2219 Ceratophyllum demersum HOM05D003580 ORTHO05D004441 3.4e-286 988.8 1033 52.2
HPP92_017521 Vanilla planifolia HOM05D003580 ORTHO05D004441 4.4e-286 988.4 1133 48.9
SHI02481 Sapria himalayana HOM05D003580 ORTHO05D004441 6.6e-282 974.5 1153 47.7
Cpa.g.sc440.1 Carica papaya HOM05D003580 ORTHO05D004441 1.1e-281 973.8 747 67.7
SGA_v2.0_scaffold31G12889 Striga asiatica HOM05D003580 ORTHO05D004441 1.8e-279 966.5 1052 52.2
Zm00001eb369950 Zea mays HOM05D003580 ORTHO05D004441 1.5e-273 946.8 1108 48.5
Zm00001eb151630 Zea mays HOM05D003580 ORTHO05D004441 8.1e-272 941.0 1119 47.7
Atru.chr10.106 Acer truncatum HOM05D003580 ORTHO05D004441 8.6e-266 921.0 730 66.7
SGA_v2.0_scaffold13G06689 Striga asiatica HOM05D003580 ORTHO05D004441 1.5e-265 920.2 934 53.2
Os01g0777000 Oryza sativa ssp. japonica HOM05D003580 ORTHO05D004441 1.2e-264 917.1 1058 48.9
Atru.chr10.124 Acer truncatum HOM05D003580 ORTHO05D004441 8.4e-261 904.4 718 66.4
Nitab4.5_0000001g0420 Nicotiana tabacum HOM05D003580 ORTHO05D004441 1.1e-244 850.9 1091 46.7
SEGI_21118 Sequoiadendron giganteum HOM05D003580 ORTHO05D004441 1.9e-236 823.5 994 45.9
SGA_v2.0_scaffold31G12887 Striga asiatica HOM05D003580 ORTHO05D004441 6.9e-223 778.5 961 47.0
Nitab4.5_0000693g0020 Nicotiana tabacum HOM05D003580 ORTHO05D004441 4.3e-217 759.2 1027 44.6
Mapoly0006s0304 Marchantia polymorpha HOM05D003580 ORTHO05D004441 4.1e-207 726.1 1159 38.9
Dinv14590 Davidia involucrata HOM05D003580 ORTHO05D004441 9.4e-204 714.9 614 61.4
Pp3c21_18130 Physcomitrium patens HOM05D003580 ORTHO05D004441 5.0e-189 666.0 1122 37.0
AagrBONN_evm.TU.Sc2ySwM_228.612 Anthoceros agrestis HOM05D003580 ORTHO05D004441 5.7e-185 652.5 1165 37.0
SMO116G0219 Selaginella moellendorffii HOM05D003580 ORTHO05D004441 7.8e-174 615.5 1080 35.9
Cfa002308 Carpinus fangiana HOM05D003580 ORTHO05D004441 7.3e-172 609.0 505 63.0
Dinv14589 Davidia involucrata HOM05D003580 ORTHO05D004441 2.6e-161 573.9 480 63.1
SEGI_09994 Sequoiadendron giganteum HOM05D003580 ORTHO05D004441 7.0e-159 565.8 665 45.7
Atru.chr10.123 Acer truncatum HOM05D003580 ORTHO05D004441 4.9e-128 463.4 372 66.7
Atru.chr10.105 Acer truncatum HOM05D003580 ORTHO05D004441 8.4e-112 409.5 327 68.2
CDE02G3888 Ceratophyllum demersum HOM05D003580 ORTHO05D004441 1.1e-111 409.1 486 49.6
Pp3c18_6580 Physcomitrium patens HOM05D003580 ORTHO05D004441 3.5e-110 404.1 756 34.7
BcaNung02234 Brassica carinata HOM05D003580 ORTHO05D004441 1.5e-108 398.7 359 64.9
SEGI_02361 Sequoiadendron giganteum HOM05D003580 ORTHO05D004441 1.4e-106 392.1 421 52.0
Eucgr.A01176 Eucalyptus grandis HOM05D003580 ORTHO05D004441 9.0e-106 389.4 526 43.9
CBR_g38826 Chara braunii HOM05D000019 ORTHO05D000048 7.4e-92 343.2 759 31.9
Pp3c22_14630 Physcomitrium patens HOM05D003580 ORTHO05D004441 3.2e-79 301.2 1036 27.3
SEGI_02603 Sequoiadendron giganteum HOM05D003580 ORTHO05D004441 1.5e-63 249.2 399 37.6
Cpa.g.sc272.6 Carica papaya HOM05D003580 ORTHO05D004441 2.1e-62 245.4 162 75.9
SEGI_41100 Sequoiadendron giganteum HOM05D003580 ORTHO05D004441 1.8e-58 232.3 363 36.9
SGA_v2.0_scaffold1489G53965 Striga asiatica HOM05D003580 ORTHO05D004441 1.9e-55 222.2 205 58.0
SEGI_26119 Sequoiadendron giganteum HOM05D003580 ORTHO05D004441 3.4e-52 211.5 286 38.5
MCO16G457 Micromonas commoda HOM05D003580 ORTHO05D004441 2.4e-50 205.3 1026 22.6
SEGI_10162 Sequoiadendron giganteum HOM05D003580 ORTHO05D004441 1.0e-48 199.9 287 38.0
QL01p051611 Quercus lobata HOM05D003580 ORTHO05D004441 2.3e-48 198.7 119 80.7
Cre14.g628050 Chlamydomonas reinhardtii HOM05D003580 ORTHO05D004441 3.9e-48 198.0 1291 22.5
QL01p051634 Quercus lobata HOM05D003580 ORTHO05D004441 5.0e-48 197.6 304 40.5
PRCOL_00004619 Prasinoderma coloniale HOM05D003580 ORTHO05D004441 2.5e-47 195.3 1038 23.1
CBR_g38824 Chara braunii HOM05D003580 ORTHO05D000002 3.1e-45 188.3 325 39.7
arahy.Tifrunner.gnm1.ann1.G7UC7Z Arachis hypogaea HOM05D003580 ORTHO05D004441 5.8e-44 184.1 144 61.8
arahy.Tifrunner.gnm1.ann1.0G6L2R Arachis hypogaea HOM05D003580 ORTHO05D004441 7.5e-44 183.7 161 57.1
SEGI_40357 Sequoiadendron giganteum HOM05D003580 ORTHO05D000003 4.1e-42 177.9 293 33.4
BcaB04g17891 Brassica carinata HOM05D003580 ORTHO05D004441 1.4e-37 162.9 92 85.9
FvH4_3g34230 Fragaria vesca HOM05D003580 ORTHO05D004441 1.4e-37 162.9 162 54.9
SEGI_20620 Sequoiadendron giganteum HOM05D003580 ORTHO05D004441 1.2e-36 159.8 168 45.8
SEGI_17593 Sequoiadendron giganteum HOM05D003580 ORTHO05D004441 4.9e-35 154.5 159 45.3
SEGI_21703 Sequoiadendron giganteum HOM05D003580 ORTHO05D004441 1.2e-33 149.8 185 42.7
TPR.G7717 Trifolium pratense HOM05D003580 ORTHO05D004441 3.5e-33 148.3 125 60.8
SEGI_22494 Sequoiadendron giganteum HOM05D003580 ORTHO05D004441 9.5e-31 140.2 136 47.8
Actinidia22485 Actinidia chinensis HOM05D003580 ORTHO05D004441 2.1e-30 139.0 194 44.8
SEGI_12986 Sequoiadendron giganteum HOM05D003580 ORTHO05D004441 1.8e-29 136.0 182 39.0
SEGI_01451 Sequoiadendron giganteum HOM05D003580 ORTHO05D004441 6.8e-29 134.0 154 42.2
SEGI_10836 Sequoiadendron giganteum HOM05D003580 ORTHO05D004441 1.5e-28 132.9 150 42.0
SEGI_37648 Sequoiadendron giganteum HOM05D003580 ORTHO05D004441 7.8e-25 120.6 166 42.8
SEGI_18317 Sequoiadendron giganteum HOM05D003580 ORTHO05D004441 3.9e-24 118.2 311 27.7
Cpa.g.c39794 Carica papaya HOM05D003580 ORTHO05D004441 2.5e-23 115.5 65 87.7
SEGI_24255 Sequoiadendron giganteum HOM05D000018 ORTHO05D003948 1.6e-22 112.8 125 42.4
SEGI_00259 Sequoiadendron giganteum HOM05D003580 ORTHO05D004441 9.0e-21 107.1 130 42.3
SEGI_23236 Sequoiadendron giganteum HOM05D003580 ORTHO05D000001 1.5e-20 106.3 154 37.0
SEGI_37860 Sequoiadendron giganteum HOM05D003580 ORTHO05D004441 7.6e-20 104.0 119 40.3
SEGI_40013 Sequoiadendron giganteum HOM05D003580 ORTHO05D004441 9.9e-20 103.6 131 39.7
QL01p051624 Quercus lobata HOM05D003580 ORTHO05D004441 1.4e-18 99.8 92 60.9
SEGI_07846 Sequoiadendron giganteum HOM05D003580 ORTHO05D004441 4.6e-17 94.7 98 46.9
SEGI_13143 Sequoiadendron giganteum HOM05D003580 ORTHO05D004441 1.1e-15 90.1 103 39.8
SEGI_32072 Sequoiadendron giganteum HOM05D003580 ORTHO05D004441 2.5e-15 89.0 95 41.1
PSO063G6607 Papaver somniferum HOM05D003580 ORTHO05D004441 3.1e-13 82.0 98 46.9
SEGI_00546 Sequoiadendron giganteum HOM05D003580 ORTHO05D004441 1.5e-12 79.7 76 47.4
VMungo1383G0656 Vigna mungo HOM05D003580 ORTHO05D004441 8.4e-11 73.9 49 77.6
SEGI_06299 Sequoiadendron giganteum HOM05D003580 ORTHO05D019257 1.1e-10 73.6 66 51.5
Medtr1g492720 Medicago truncatula HOM05D003580 ORTHO05D004441 4.2e-10 71.6 60 68.3


User provided reference genes

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