Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aa31LG11G12180 Aethionema arabicum HOM05D002536 ORTHO05D008091 1.0e-196 689.9 343 100.0
Sp6g26760 Schrenkiella parvula HOM05D002536 ORTHO05D008091 2.3e-124 449.5 267 87.6
Thhalv10014009m.g Eutrema salsugineum HOM05D002536 ORTHO05D008091 6.7e-124 448.0 267 87.3
A02p04220 Brassica napus HOM05D002536 ORTHO05D008091 5.8e-120 434.9 284 81.7
BraA02t05385Z Brassica rapa HOM05D002536 ORTHO05D008091 5.8e-120 434.9 284 81.7
BolC2t06821H Brassica oleracea HOM05D002536 ORTHO05D008091 1.7e-119 433.3 281 81.5
C02p09100 Brassica napus HOM05D002536 ORTHO05D008091 1.6e-117 426.8 288 79.5
AL6G28530 Arabidopsis lyrata HOM05D002536 ORTHO05D008091 1.9e-115 419.9 267 84.3
CARHR195750 Cardamine hirsuta HOM05D002536 ORTHO05D008091 2.5e-115 419.5 271 82.3
TWI53G1346 Tripterygium wilfordii HOM05D002536 ORTHO05D008091 7.4e-115 417.9 272 77.2
Sabra04G0061700 Salix brachista HOM05D002536 ORTHO05D008091 2.1e-114 416.4 270 78.5
Atru.chr1.1780 Acer truncatum HOM05D002536 ORTHO05D008091 7.6e-112 407.9 266 78.6
Atru.chr1.1783 Acer truncatum HOM05D002536 ORTHO05D008091 7.6e-112 407.9 266 78.6
Potri.004G091600 Populus trichocarpa HOM05D002536 ORTHO05D008091 1.0e-111 407.5 270 77.8
Carub.0006s1568 Capsella rubella HOM05D002536 ORTHO05D008091 3.8e-111 405.6 267 80.9
Eucgr.F02816 Eucalyptus grandis HOM05D002536 ORTHO05D008091 6.5e-111 404.8 269 77.7
Rhsim10G0078900 Rhododendron simsii HOM05D002536 ORTHO05D008091 8.4e-111 404.4 322 66.5
DCAR_008922 Daucus carota HOM05D000103 ORTHO05D008091 1.6e-109 400.2 266 78.2
CsaV3_3G017670 Cucumis sativus L. HOM05D002536 ORTHO05D008091 6.0e-109 398.3 268 76.9
Lalb_Chr03g0036071 Lupinus albus HOM05D002536 ORTHO05D008091 1.8e-108 396.7 269 75.5
Sed0014940 Sechium edule HOM05D002536 ORTHO05D008091 1.8e-108 396.7 270 76.7
MELO3C020303.2 Cucumis melo HOM05D002536 ORTHO05D008091 6.7e-108 394.8 270 75.9
TPR.G11790 Trifolium pratense HOM05D002536 ORTHO05D008091 8.7e-108 394.4 316 65.5
arahy.Tifrunner.gnm1.ann1.SZ684F Arachis hypogaea HOM05D002536 ORTHO05D008091 2.5e-107 392.9 284 71.1
COL.COLO4_16592 Corchorus olitorius HOM05D002536 ORTHO05D008091 2.5e-107 392.9 273 75.8
Medtr5g087440 Medicago truncatula HOM05D002536 ORTHO05D008091 2.5e-107 392.9 290 70.3
AT5G17460 Arabidopsis thaliana HOM05D002536 ORTHO05D008091 3.3e-107 392.5 235 88.9
Ciclev10012168m.g Citrus clementina HOM05D002536 ORTHO05D008091 3.3e-107 392.5 275 75.3
CANSAT78G0797 Cannabis sativa HOM05D002536 ORTHO05D008091 7.4e-107 391.3 270 75.2
ClCG05G010840 Citrullus lanatus HOM05D002536 ORTHO05D008091 9.7e-107 391.0 270 75.9
Psat2g023480 Pisum sativum HOM05D002536 ORTHO05D008091 9.7e-107 391.0 280 70.7
Haze_14213 Corylus avellana HOM05D002536 ORTHO05D008091 1.6e-106 390.2 291 69.8
Ca_06135_v3 Cicer arietinum L. HOM05D002536 ORTHO05D008091 2.2e-106 389.8 269 73.2
Medtr5g086010 Medicago truncatula HOM05D002536 ORTHO05D008091 6.3e-106 388.3 269 72.9
arahy.Tifrunner.gnm1.ann1.NZLK2N Arachis hypogaea HOM05D002536 ORTHO05D008091 1.8e-105 386.7 265 74.0
LjContig00564g0008816 Lotus japonicus HOM05D002536 ORTHO05D008091 1.8e-105 386.7 270 74.1
Cfa007856 Carpinus fangiana HOM05D002536 ORTHO05D008091 4.1e-105 385.6 277 71.5
Actinidia15922 Actinidia chinensis HOM05D002536 ORTHO05D008091 9.0e-105 384.4 269 72.9
AUR62023248 Chenopodium quinoa HOM05D002536 ORTHO05D008091 9.0e-105 384.4 270 74.1
Cpa.g.sc116.19 Carica papaya HOM05D002536 ORTHO05D008091 1.5e-104 383.6 269 75.8
Aqoxy3G00142 Aquilegia oxysepala HOM05D002536 ORTHO05D008091 2.6e-104 382.9 266 73.7
CiPaw.04G045700 Carya illinoinensis HOM05D002536 ORTHO05D008091 1.3e-103 380.6 277 72.6
QL05p059601 Quercus lobata HOM05D002536 ORTHO05D008091 1.3e-103 380.6 283 69.6
Ah.10g037920 Amaranthus hybridus HOM05D002536 ORTHO05D008091 1.7e-103 380.2 265 74.3
Lj2P435T31 Lonicera japonica HOM05D002536 ORTHO05D008091 5.0e-103 378.6 263 74.1
EL10Ac2g04494 Beta vulgaris HOM05D002536 ORTHO05D008091 6.5e-103 378.3 265 74.0
PGR004G1229 Punica granatum HOM05D002536 ORTHO05D008091 8.5e-103 377.9 266 74.1
QL05p059839 Quercus lobata HOM05D002536 ORTHO05D008091 1.9e-102 376.7 275 71.3
Cc07_g08230 Coffea canephora HOM05D002536 ORTHO05D008091 5.5e-102 375.2 266 72.6
Prupe.3G152500 Prunus persica HOM05D002536 ORTHO05D008091 1.6e-101 373.6 269 72.1
HanXRQChr11g0325231 Helianthus annuus HOM05D002536 ORTHO05D008091 2.1e-101 373.2 271 72.0
QL05p058873 Quercus lobata HOM05D002536 ORTHO05D008091 2.7e-101 372.9 272 71.3
BcaC03g13522 Brassica carinata HOM05D002536 ORTHO05D008091 4.6e-101 372.1 248 78.6
MD09G1260700 Malus domestica HOM05D002536 ORTHO05D008091 6.1e-101 371.7 266 72.9
MSTRG.23612 Avicennia marina HOM05D002536 ORTHO05D008091 1.8e-100 370.2 266 71.8
GSVIVG01030878001 Vitis vinifera HOM05D002536 ORTHO05D008091 3.0e-100 369.4 277 69.7
TAR622G0880 Trochodendron aralioides HOM05D002536 ORTHO05D008091 5.1e-100 368.6 267 73.0
GSVIVG01030879001 Vitis vinifera HOM05D002536 ORTHO05D008091 6.7e-100 368.2 269 71.4
ECA232G4028 Erigeron canadensis HOM05D002536 ORTHO05D008091 8.8e-100 367.9 270 70.7
Manes.01G115200 Manihot esculenta HOM05D002536 ORTHO05D008091 8.8e-100 367.9 235 82.1
VMungo1309G0890 Vigna mungo HOM05D002536 ORTHO05D008091 8.8e-100 367.9 316 63.3
Sopen02g035940 Solanum pennellii HOM05D002536 ORTHO05D008091 2.5e-99 366.3 266 72.6
Solyc02g091320.4 Solanum lycopersicum HOM05D002536 ORTHO05D008091 3.3e-99 365.9 266 72.6
FAN23G2237 Fragaria x ananassa HOM05D002536 ORTHO05D008091 1.7e-98 363.6 269 70.3
Gohir.D04G186100 Gossypium hirsutum HOM05D002536 ORTHO05D008091 2.2e-98 363.2 273 71.1
Gorai.012G182500 Gossypium raimondii HOM05D002536 ORTHO05D008091 2.2e-98 363.2 273 71.1
Phvul.004G133300 Phaseolus vulgaris HOM05D002536 ORTHO05D008091 2.8e-98 362.8 290 66.6
SalBow3G4287 Salvia bowleyana HOM05D002536 ORTHO05D008091 3.7e-98 362.5 270 69.6
Lsat_1_v5_gn_4_154760 Lactuca sativa HOM05D002536 ORTHO05D008091 4.8e-98 362.1 278 70.1
Hund13690 Selenicereus undatus HOM05D002536 ORTHO05D008091 4.8e-98 362.1 266 70.7
Gohir.A04G142800 Gossypium hirsutum HOM05D002536 ORTHO05D008091 1.4e-97 360.5 273 70.7
Thecc.02G292900 Theobroma cacao HOM05D002536 ORTHO05D008091 1.8e-97 360.1 273 71.1
Migut.H00262 Erythranthe guttata HOM05D002536 ORTHO05D008091 3.1e-97 359.4 267 70.0
arahy.Tifrunner.gnm1.ann1.CBV847 Arachis hypogaea HOM05D002536 ORTHO05D008091 4.1e-97 359.0 269 68.0
arahy.Tifrunner.gnm1.ann1.YLI9AK Arachis hypogaea HOM05D002536 ORTHO05D008091 6.9e-97 358.2 245 73.1
Duzib248G1146 Durio zibethinus HOM05D002536 ORTHO05D008091 1.2e-96 357.5 277 70.4
Oeu047422.1 Olea europaea HOM05D002536 ORTHO05D008091 1.2e-96 357.5 267 70.8
CAN.G625.80 Capsicum annuum HOM05D002536 ORTHO05D008091 2.6e-96 356.3 270 70.4
Phvul.008G162400 Phaseolus vulgaris HOM05D002536 ORTHO05D008091 2.6e-96 356.3 289 65.4
MBI16_g05920_MAGBIO Magnolia biondii HOM05D002536 ORTHO05D006290 1.0e-95 354.4 269 69.5
Nitab4.5_0002456g0160 Nicotiana tabacum HOM05D002536 ORTHO05D008091 1.0e-95 354.4 266 70.3
Nitab4.5_0002248g0020 Nicotiana tabacum HOM05D002536 ORTHO05D008091 5.0e-95 352.1 266 69.9
Peaxi162Scf00803g00531 Petunia axillaris HOM05D002536 ORTHO05D008091 6.5e-95 351.7 269 69.5
PGSC0003DMG400030642 Solanum tuberosum HOM05D002536 ORTHO05D008091 6.5e-95 351.7 266 70.7
Sc10g0000870 Simmondsia chinensis HOM05D002536 ORTHO05D008091 1.1e-94 350.9 269 68.4
Nn3g18195 Nelumbo nucifera HOM05D002536 ORTHO05D008091 1.9e-94 350.1 273 68.5
RcHm_v2.0_Chr3g0492091 Rosa chinensis HOM05D002536 ORTHO05D008091 3.2e-94 349.4 269 69.1
Hma1.2p1_0283F.1_g113560 Hydrangea macrophylla HOM05D002536 ORTHO05D008091 1.6e-93 347.1 266 68.8
CSS0023678 Camellia sinensis var. sinensis HOM05D002536 ORTHO05D006290 6.1e-93 345.1 266 68.4
PSO478G1642 Papaver somniferum HOM05D002536 ORTHO05D008091 3.0e-92 342.8 271 69.7
Dinv19004 Davidia involucrata HOM05D002536 ORTHO05D008091 3.9e-92 342.4 266 68.4
FvH4_1g30050 Fragaria vesca HOM05D002536 ORTHO05D008091 6.7e-92 341.7 269 66.9
PSO782G0049 Papaver somniferum HOM05D002536 ORTHO05D008091 1.1e-91 340.9 273 67.8
FAN26G2179 Fragaria x ananassa HOM05D002536 ORTHO05D008091 1.5e-91 340.5 279 64.9
FAN19G1396 Fragaria x ananassa HOM05D002536 ORTHO05D008091 2.0e-91 340.1 267 67.0
QL05p059463 Quercus lobata HOM05D002536 ORTHO05D008091 1.5e-88 330.5 275 64.0
Os01g0125700 Oryza sativa ssp. japonica HOM05D002536 ORTHO05D008091 1.1e-83 314.3 267 62.5
ATR0041G006 Amborella trichopoda HOM05D002536 ORTHO05D008091 5.7e-83 312.0 275 62.5
CDE07G0699 Ceratophyllum demersum HOM05D002536 ORTHO05D008091 6.3e-82 308.5 287 58.9
SGA_v2.0_scaffold6G03262 Striga asiatica HOM05D002536 ORTHO05D008091 7.0e-81 305.1 281 57.3
AUR62023202 Chenopodium quinoa HOM05D002536 ORTHO05D008091 1.7e-79 300.4 215 71.2
SHI17045 Sapria himalayana HOM05D002536 ORTHO05D008091 6.1e-77 292.0 267 62.2
SGA_v2.0_scaffold6G03263 Striga asiatica HOM05D002536 ORTHO05D008091 9.7e-75 284.6 279 55.6
FAN28G0948 Fragaria x ananassa HOM05D002536 ORTHO05D008091 2.8e-74 283.1 231 63.6
Glyma.14G164000 Glycine max HOM05D002536 ORTHO05D008091 3.8e-71 272.7 318 51.9
SGA_v2.0_scaffold6G03266 Striga asiatica HOM05D002536 ORTHO05D008091 8.5e-71 271.6 241 60.6
Zm00001eb334950 Zea mays HOM05D002536 ORTHO05D008091 4.0e-68 262.7 170 77.6
MD09G1260800 Malus domestica HOM05D002536 ORTHO05D008091 1.7e-63 247.3 185 70.8
MBI16_g46274_MAGBIO Magnolia biondii HOM05D002536 ORTHO05D008091 3.8e-63 246.1 172 73.3
unitig_899.g15351 Utricularia gibba HOM05D002536 ORTHO05D008091 5.5e-62 242.3 218 56.9
SEGI_34238 Sequoiadendron giganteum HOM05D002536 ORTHO05D008091 7.8e-56 221.9 270 46.3
SGA_v2.0_scaffold6G03268 Striga asiatica HOM05D002536 ORTHO05D008091 1.9e-54 217.2 233 53.2
Glyma.13G079200 Glycine max HOM05D002536 ORTHO05D008091 4.3e-54 216.1 228 53.5
BcaB08g36768 Brassica carinata HOM05D002536 ORTHO05D007973 8.6e-47 191.8 134 76.1
MD09G1260900 Malus domestica HOM05D002536 ORTHO05D008091 1.7e-39 167.5 189 51.3
FAN28G0812 Fragaria x ananassa HOM05D002536 ORTHO05D008091 1.7e-34 151.0 266 39.8
A10p21940 Brassica napus HOM05D002536 ORTHO05D008091 1.5e-27 127.9 81 82.7
HPP92_000766 Vanilla planifolia HOM05D002536 ORTHO05D008091 4.2e-25 119.8 135 51.1
BcaC04g18790 Brassica carinata HOM05D002536 ORTHO05D008091 1.0e-23 115.2 91 73.6
BolC9t58807H Brassica oleracea HOM05D002536 ORTHO05D008091 5.1e-23 112.8 85 71.8
C09p59690 Brassica napus HOM05D002536 ORTHO05D008091 1.9e-22 110.9 91 72.5
BraA10t44252Z Brassica rapa HOM05D002536 ORTHO05D008091 2.0e-11 74.3 66 62.1
A10p21930 Brassica napus HOM05D002536 ORTHO05D008091 7.6e-11 72.4 66 62.1
Carub.0006s1569 Capsella rubella HOM05D006437 ORTHO05D007973 1.5e-06 58.2 25 96.0
BcaC04g18789 Brassica carinata HOM05D006437 ORTHO05D007973 3.3e-06 57.0 25 92.0
AL6G28540 Arabidopsis lyrata HOM05D006437 ORTHO05D007973 5.6e-06 56.2 25 88.0
CARHR195740 Cardamine hirsuta HOM05D006437 ORTHO05D007973 5.6e-06 56.2 25 92.0


User provided reference genes

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