Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aa31LG11G10360 Aethionema arabicum HOM05D008408 ORTHO05D009173 8.0e-44 179.9 81 100.0
Aa31LG11G10380 Aethionema arabicum HOM05D008408 ORTHO05D009173 2.3e-22 108.6 80 66.2
Aa31LG11G10370 Aethionema arabicum HOM05D008408 ORTHO05D009173 8.6e-22 106.7 79 62.0
AT5G19315 Arabidopsis thaliana HOM05D008408 ORTHO05D009173 1.5e-13 79.3 79 45.6
Carub.0006s1765 Capsella rubella HOM05D008408 ORTHO05D009173 9.5e-13 76.6 80 47.5
BNapus_Darmor_BZH_scaffold_38p02640 Brassica napus HOM05D008408 ORTHO05D009173 1.2e-12 76.3 80 47.5
A02p05470 Brassica napus HOM05D008408 ORTHO05D009173 1.6e-12 75.9 80 47.5
BraA02t05498Z Brassica rapa HOM05D008408 ORTHO05D009173 1.6e-12 75.9 80 47.5
Thhalv10001718m.g Eutrema salsugineum HOM05D008408 ORTHO05D009173 3.6e-12 74.7 84 46.4
AL6G30800 Arabidopsis lyrata HOM05D008408 ORTHO05D009173 4.7e-12 74.3 79 45.6
THA.LOC109116863 Tarenaya hassleriana HOM05D008408 ORTHO05D009173 2.3e-11 72.0 76 48.7
Sp4g25680 Schrenkiella parvula HOM05D008408 ORTHO05D009173 4.0e-11 71.2 84 44.0
BraA02t04950Z Brassica rapa HOM05D008408 ORTHO05D009173 1.5e-10 69.3 79 44.3
Carub.0008s0682 Capsella rubella HOM05D008408 ORTHO05D009173 2.6e-10 68.6 80 42.5
C02p03520 Brassica napus HOM05D008408 ORTHO05D009173 3.4e-10 68.2 79 44.3
BolC2t06311H Brassica oleracea HOM05D008408 ORTHO05D009173 3.4e-10 68.2 79 44.3
A10p28360 Brassica napus HOM05D008408 ORTHO05D009173 4.4e-10 67.8 78 43.6
BraA10t44883Z Brassica rapa HOM05D008408 ORTHO05D009173 5.8e-10 67.4 78 43.6
C09p68620 Brassica napus HOM05D008408 ORTHO05D009173 7.5e-10 67.0 78 43.6
CARHR193650 Cardamine hirsuta HOM05D008408 ORTHO05D009173 7.5e-10 67.0 75 46.7
AT5G08315 Arabidopsis thaliana HOM05D008408 ORTHO05D009173 9.9e-10 66.6 80 41.2
BolC9t59606H Brassica oleracea HOM05D008408 ORTHO05D009173 1.3e-09 66.2 79 41.8
THA.LOC109116906 Tarenaya hassleriana HOM05D008408 ORTHO05D009173 1.7e-09 65.9 77 42.9
Carub.0008s0683 Capsella rubella HOM05D008408 ORTHO05D009173 4.9e-09 64.3 75 42.7
BcaC03g13221 Brassica carinata HOM05D008408 ORTHO05D009173 6.4e-09 63.9 83 42.2
C02p03510 Brassica napus HOM05D008408 ORTHO05D009173 6.4e-09 63.9 78 42.3
BolC2t06310H Brassica oleracea HOM05D008408 ORTHO05D009173 6.4e-09 63.9 78 42.3
CARHR138690 Cardamine hirsuta HOM05D008408 ORTHO05D009173 1.4e-08 62.8 78 44.9
AT5G08055 Arabidopsis thaliana HOM05D008408 ORTHO05D009173 2.4e-08 62.0 80 38.8
AL6G18730 Arabidopsis lyrata HOM05D008408 ORTHO05D009173 1.2e-07 59.7 77 40.3
Thecc.01G234600 Theobroma cacao HOM05D008282 ORTHO05D009173 2.1e-07 58.9 80 43.8
AT1G33607 Arabidopsis thaliana HOM05D008408 ORTHO05D009173 3.0e-06 55.1 81 39.5


User provided reference genes

Program Settings