Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aa31LG11G10020 Aethionema arabicum HOM05D008255 ORTHO05D011943 1.4e-50 203.0 133 100.0
Thhalv10005106m.g Eutrema salsugineum HOM05D008255 ORTHO05D011943 1.5e-23 113.2 136 49.3
BcaNung03958 Brassica carinata HOM05D008255 ORTHO05D011943 2.0e-20 102.8 134 59.0
Sp2g21360 Schrenkiella parvula HOM05D008255 ORTHO05D011943 2.3e-19 99.4 142 50.7
CARHR186950 Cardamine hirsuta HOM05D008255 ORTHO05D011943 4.0e-16 88.6 93 54.8
THA.LOC104802769 Tarenaya hassleriana HOM05D008255 ORTHO05D011943 8.9e-16 87.4 137 56.2
CARHR080400 Cardamine hirsuta HOM05D024382 ORTHO05D011943 5.7e-15 84.7 94 55.3
BraA06t26610Z Brassica rapa HOM05D008255 ORTHO05D011943 1.7e-14 83.2 137 48.9
BcaNung02826 Brassica carinata HOM05D008255 ORTHO05D011943 6.3e-14 81.3 143 39.9
C07p41630 Brassica napus HOM05D008255 ORTHO05D011943 6.3e-14 81.3 143 37.8
BolC7t44700H Brassica oleracea HOM05D008255 ORTHO05D011943 6.3e-14 81.3 143 39.9
A06p36840 Brassica napus HOM05D008255 ORTHO05D011943 9.2e-13 77.4 138 38.4
AL3G16700 Arabidopsis lyrata HOM05D024382 ORTHO05D011943 2.0e-12 76.3 89 52.8
C02p59110 Brassica napus HOM05D008255 ORTHO05D011943 2.7e-12 75.9 134 47.8
AT5G26720 Arabidopsis thaliana HOM05D008255 ORTHO05D011943 3.5e-12 75.5 140 51.4
Carub.0003s0531 Capsella rubella HOM05D024382 ORTHO05D011943 3.5e-12 75.5 89 53.9
AL6G38460 Arabidopsis lyrata HOM05D008255 ORTHO05D011943 7.8e-12 74.3 141 44.7
BcaB07g29964 Brassica carinata HOM05D008255 ORTHO05D011943 1.7e-11 73.2 131 37.4
BolC2t11966H Brassica oleracea HOM05D008255 ORTHO05D011943 8.6e-11 70.9 131 45.0
BcaC03g17871 Brassica carinata HOM05D008255 ORTHO05D011943 2.5e-10 69.3 131 45.0
BcaNung03956 Brassica carinata HOM05D008255 ORTHO05D011943 9.5e-10 67.4 94 42.6
BraA02t08903Z Brassica rapa HOM05D008255 ORTHO05D011943 9.5e-10 67.4 131 42.7
A02p39380 Brassica napus HOM05D008255 ORTHO05D011943 1.2e-09 67.0 131 41.2
QL03p011396 Quercus lobata HOM05D008155 ORTHO05D010411 1.8e-08 63.2 100 36.0
AT3G05935 Arabidopsis thaliana HOM05D024382 ORTHO05D011943 2.3e-08 62.8 90 42.2
VMungo1383G2435 Vigna mungo HOM05D008155 ORTHO05D010411 2.3e-08 62.8 51 54.9
Manes.09G182600 Manihot esculenta HOM05D008155 ORTHO05D010411 8.9e-08 60.8 96 34.4
TPR.G35721 Trifolium pratense HOM05D008155 ORTHO05D010411 8.9e-08 60.8 121 33.9
Migut.N00987 Erythranthe guttata HOM05D008155 ORTHO05D010411 2.0e-07 59.7 91 42.9
Thecc.05G331400 Theobroma cacao HOM05D008155 ORTHO05D010411 2.0e-07 59.7 92 37.0
Solyc01g102460.4 Solanum lycopersicum HOM05D008155 ORTHO05D010411 2.6e-07 59.3 92 40.2
Sopen01g044900 Solanum pennellii HOM05D008155 ORTHO05D010411 2.6e-07 59.3 92 40.2
Ciclev10029557m.g Citrus clementina HOM05D008155 ORTHO05D010411 3.4e-07 58.9 51 49.0
Manes.08G106200 Manihot esculenta HOM05D008155 ORTHO05D010411 3.4e-07 58.9 96 36.5
Aa31LG5G16350 Aethionema arabicum HOM05D024382 ORTHO05D011943 4.4e-07 58.5 92 40.2
Cfa004403 Carpinus fangiana HOM05D008155 ORTHO05D010411 1.3e-06 57.0 99 33.3
Gohir.A13G206400 Gossypium hirsutum HOM05D008155 ORTHO05D010411 1.3e-06 57.0 49 51.0
Gorai.013G241100 Gossypium raimondii HOM05D008155 ORTHO05D010411 1.3e-06 57.0 49 51.0
Phvul.001G221000 Phaseolus vulgaris HOM05D008155 ORTHO05D010411 1.3e-06 57.0 89 41.6
Glyma.03G227200 Glycine max HOM05D008155 ORTHO05D010411 1.7e-06 56.6 95 42.1
RcHm_v2.0_Chr3g0459031 Rosa chinensis HOM05D008155 ORTHO05D010411 1.7e-06 56.6 97 36.1
CSS0018964 Camellia sinensis var. sinensis HOM05D008155 ORTHO05D010411 2.2e-06 56.2 91 34.1
Oeu034763.2 Olea europaea HOM05D008155 ORTHO05D010411 2.9e-06 55.8 91 38.5
SalBow8G5556 Salvia bowleyana HOM05D008155 ORTHO05D010411 2.9e-06 55.8 48 45.8
MELO3C004141.2 Cucumis melo HOM05D008155 ORTHO05D010411 3.7e-06 55.5 55 47.3
Medtr7g111230 Medicago truncatula HOM05D008155 ORTHO05D010411 3.7e-06 55.5 51 51.0
Sed0026568 Sechium edule HOM05D008155 ORTHO05D010411 4.9e-06 55.1 80 42.5
CANSAT54G1408 Cannabis sativa HOM05D008155 ORTHO05D010411 6.4e-06 54.7 98 34.7
Prupe.6G302400 Prunus persica HOM05D008155 ORTHO05D010411 8.3e-06 54.3 105 37.1
Sed0023159 Sechium edule HOM05D008155 ORTHO05D010411 8.3e-06 54.3 103 34.0


User provided reference genes

Program Settings