Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aa31LG10G9610 Aethionema arabicum HOM05D000880 ORTHO05D009684 1.1e-218 763.8 696 100.0
Aa31LG10G9680 Aethionema arabicum HOM05D000880 ORTHO05D009684 1.9e-125 454.1 611 89.2
Sp2g22620 Schrenkiella parvula HOM05D000880 ORTHO05D009684 8.3e-57 226.1 316 63.9
Thhalv10003880m.g Eutrema salsugineum HOM05D000880 ORTHO05D009684 2.4e-56 224.6 313 63.3
A06p35600 Brassica napus HOM05D000880 ORTHO05D009684 2.5e-53 214.5 317 62.8
Carub.0006s2268 Capsella rubella HOM05D000880 ORTHO05D009684 9.6e-53 212.6 314 61.5
BraA06t26485Z Brassica rapa HOM05D000880 ORTHO05D009684 3.6e-52 210.7 317 62.5
CARHR188620 Cardamine hirsuta HOM05D000880 ORTHO05D009684 8.1e-52 209.5 318 61.3
C07p42940 Brassica napus HOM05D000880 ORTHO05D009684 1.4e-51 208.8 317 62.1
AT5G24830 Arabidopsis thaliana HOM05D000880 ORTHO05D009684 7.6e-50 203.0 312 60.9
BolC7t44823H Brassica oleracea HOM05D000880 ORTHO05D009684 2.9e-49 201.1 316 62.0
AL6G36470 Arabidopsis lyrata HOM05D000880 ORTHO05D009684 1.9e-48 198.4 312 61.2
Atru.chr7.2671 Acer truncatum HOM05D000880 ORTHO05D009684 1.1e-45 189.1 339 53.1
Cpa.g.sc10.206 Carica papaya HOM05D000880 ORTHO05D009684 5.1e-38 163.7 341 51.3
Cfa013251 Carpinus fangiana HOM05D000880 ORTHO05D008158 5.1e-38 163.7 357 49.0
CiPaw.07G214800 Carya illinoinensis HOM05D000880 ORTHO05D009684 9.6e-37 159.5 349 48.7
Actinidia06447 Actinidia chinensis HOM05D000880 ORTHO05D009684 1.5e-34 152.1 242 59.9
Prupe.1G462500 Prunus persica HOM05D000880 ORTHO05D009684 4.5e-34 150.6 339 49.0
arahy.Tifrunner.gnm1.ann1.D3X7TW Arachis hypogaea HOM05D005666 ORTHO05D007183 4.9e-33 147.1 349 45.3
CSS0007644 Camellia sinensis var. sinensis HOM05D000880 ORTHO05D009684 1.1e-32 146.0 243 58.0
Ca_12883_v3 Cicer arietinum L. HOM05D000880 ORTHO05D009684 1.9e-32 145.2 241 59.8
arahy.Tifrunner.gnm1.ann1.CHY0RW Arachis hypogaea HOM05D000880 ORTHO05D009684 2.4e-32 144.8 349 45.3
CsaV3_2G031530 Cucumis sativus L. HOM05D000880 ORTHO05D009684 4.2e-32 144.1 251 57.0
Dinv15656 Davidia involucrata HOM05D000880 ORTHO05D009684 9.3e-32 142.9 247 57.1
Haze_21694 Corylus avellana HOM05D000880 ORTHO05D009684 2.7e-31 141.4 237 59.5
Ciclev10007859m.g Citrus clementina HOM05D000880 ORTHO05D009684 1.3e-30 139.0 317 49.8
MD08G1133900 Malus domestica HOM05D000880 ORTHO05D009684 1.8e-30 138.7 332 47.0
Manes.07G088100 Manihot esculenta HOM05D000880 ORTHO05D009684 2.3e-30 138.3 320 48.1
FAN20G2124 Fragaria x ananassa HOM05D000880 ORTHO05D009684 6.7e-30 136.7 341 46.0
Lalb_Chr03g0032741 Lupinus albus HOM05D000880 ORTHO05D009684 6.7e-30 136.7 240 57.9
Hund04480 Selenicereus undatus HOM05D000880 ORTHO05D009684 8.7e-30 136.3 250 56.8
CANSAT78G1387 Cannabis sativa HOM05D000880 ORTHO05D009684 1.1e-29 136.0 333 47.4
Rhsim04G0217100 Rhododendron simsii HOM05D000880 ORTHO05D009684 1.9e-29 135.2 254 54.3
RcHm_v2.0_Chr6g0312241 Rosa chinensis HOM05D000880 ORTHO05D009684 2.5e-29 134.8 349 46.1
Potri.018G004400 Populus trichocarpa HOM05D000880 ORTHO05D009684 3.3e-29 134.4 250 55.2
BcaNung01260 Brassica carinata HOM05D000880 ORTHO05D009684 1.3e-28 132.5 182 48.4
QL12p024656 Quercus lobata HOM05D000880 ORTHO05D009684 3.7e-28 131.0 323 48.9
FAN24G3119 Fragaria x ananassa HOM05D000880 ORTHO05D009684 6.2e-28 130.2 337 45.7
Sed0004667 Sechium edule HOM05D000880 ORTHO05D009684 1.1e-27 129.4 225 61.8
Lj3g0007027 Lotus japonicus HOM05D000880 ORTHO05D009684 1.8e-27 128.6 230 49.6
TAR626G1204 Trochodendron aralioides HOM05D000880 ORTHO05D009684 6.9e-27 126.7 237 57.8
Glyma.13G197400 Glycine max HOM05D000880 ORTHO05D009684 2.0e-26 125.2 240 55.0
Thecc.09G004700 Theobroma cacao HOM05D000880 ORTHO05D009684 1.0e-25 122.9 195 38.5
VMungo1127G1257 Vigna mungo HOM05D000880 ORTHO05D009684 2.9e-25 121.3 235 57.4
MELO3C011202.2 Cucumis melo HOM05D000880 ORTHO05D009684 4.9e-25 120.6 230 57.8
Lj6C69T3 Lonicera japonica HOM05D000880 ORTHO05D009684 6.5e-25 120.2 318 46.5
ClCG08G012780 Citrullus lanatus HOM05D006422 ORTHO05D007992 1.4e-24 119.0 230 57.0
FvH4_2g30660 Fragaria vesca HOM05D000880 ORTHO05D009684 2.5e-24 118.2 269 51.7
TPR.G12115 Trifolium pratense HOM05D000880 ORTHO05D009684 2.5e-24 118.2 293 47.4
FAN27G3148 Fragaria x ananassa HOM05D000880 ORTHO05D009684 3.2e-24 117.9 248 54.4
Phvul.011G207000 Phaseolus vulgaris HOM05D000880 ORTHO05D009684 7.1e-24 116.7 238 55.9
Nitab4.5_0000502g0180 Nicotiana tabacum HOM05D000880 ORTHO05D009684 9.3e-24 116.3 291 47.8
Sabra18G0010100 Salix brachista HOM05D000880 ORTHO05D009684 9.3e-24 116.3 326 45.4
Sabra18G0001200 Salix brachista HOM05D000880 ORTHO05D009684 1.2e-23 115.9 325 45.5
Nn8g39798 Nelumbo nucifera HOM05D000880 ORTHO05D009684 3.5e-23 114.4 292 47.9
vmacro08195 Vaccinium macrocarpon HOM05D000880 ORTHO05D009684 3.5e-23 114.4 245 53.9
vmacro08192 Vaccinium macrocarpon HOM05D000880 ORTHO05D009684 6.0e-23 113.6 326 46.3
Aqoxy5G01876 Aquilegia oxysepala HOM05D000880 ORTHO05D009684 3.0e-22 111.3 251 52.2
Glyma.15G236000 Glycine max HOM05D000880 ORTHO05D009684 1.1e-21 109.4 195 61.5
Lj4A910T18 Lonicera japonica HOM05D000880 ORTHO05D009684 1.1e-21 109.4 241 54.8
GSVIVG01003996001 Vitis vinifera HOM05D000880 ORTHO05D009684 1.1e-21 109.4 209 61.7
Haze_10332 Corylus avellana HOM05D000880 ORTHO05D009684 1.9e-21 108.6 214 58.9
PGSC0003DMG400005692 Solanum tuberosum HOM05D000880 ORTHO05D009684 1.9e-21 108.6 348 43.1
Migut.E01433 Erythranthe guttata HOM05D000880 ORTHO05D009684 2.5e-21 108.2 289 49.8
Psat6g031840 Pisum sativum HOM05D000880 ORTHO05D009684 2.5e-21 108.2 297 47.8
Cc08_g06370 Coffea canephora HOM05D000880 ORTHO05D009684 3.3e-21 107.8 331 45.3
Medtr1g010020 Medicago truncatula HOM05D000880 ORTHO05D009684 3.3e-21 107.8 287 48.4
Solyc03g120070.4 Solanum lycopersicum HOM05D000880 ORTHO05D009684 5.7e-21 107.1 320 45.0
AUR62017906 Chenopodium quinoa HOM05D000880 ORTHO05D009684 1.8e-19 102.1 229 51.1
SGA_v2.0_scaffold121G33022 Striga asiatica HOM05D000880 ORTHO05D009684 5.3e-19 100.5 251 48.2
Sopen03g038940 Solanum pennellii HOM05D000880 ORTHO05D009684 3.4e-18 97.8 320 43.4
AUR62003593 Chenopodium quinoa HOM05D000880 ORTHO05D009684 4.5e-18 97.4 224 51.8
PGR044G0315 Punica granatum HOM05D000880 ORTHO05D009684 2.9e-17 94.7 327 41.9
Nitab4.5_0001956g0020 Nicotiana tabacum HOM05D000880 ORTHO05D009684 2.5e-16 91.7 285 47.4
SalBow8G2909 Salvia bowleyana HOM05D004918 ORTHO05D005706 7.2e-16 90.1 222 55.0
Ah.02g121750 Amaranthus hybridus HOM05D000880 ORTHO05D009684 9.3e-16 89.7 237 50.6
HanXRQChr07g0202221 Helianthus annuus HOM05D000880 ORTHO05D009684 9.3e-16 89.7 145 40.0
Peaxi162Scf00288g01016 Petunia axillaris HOM05D000880 ORTHO05D009684 2.7e-15 88.2 260 46.9
EL10Ac6g15284 Beta vulgaris HOM05D000880 ORTHO05D009684 3.5e-15 87.8 225 53.8
Eucgr.H00073 Eucalyptus grandis HOM05D000880 ORTHO05D009684 3.0e-14 84.7 199 29.6
Lsat_1_v5_gn_5_33201 Lactuca sativa HOM05D000880 ORTHO05D009684 5.1e-14 84.0 198 32.8
ECA236G3570 Erigeron canadensis HOM05D000705 ORTHO05D002970 4.3e-13 80.9 237 49.8
CiPaw.15G081300 Carya illinoinensis HOM05D000880 ORTHO05D009684 9.7e-13 79.7 97 44.3
ECA232G0576 Erigeron canadensis HOM05D000880 ORTHO05D009684 2.8e-12 78.2 104 37.5
MD15G1110300 Malus domestica HOM05D000880 ORTHO05D009684 3.1e-11 74.7 175 58.3
Sc07g0001710 Simmondsia chinensis HOM05D000880 ORTHO05D009684 5.3e-11 73.9 96 41.7
Cpa.g.sc10.209 Carica papaya HOM05D000880 ORTHO05D009684 2.6e-10 71.6 47 61.7
Oeu040613.1 Olea europaea HOM05D000880 ORTHO05D009684 4.5e-10 70.9 130 33.1
PSO017G1147 Papaver somniferum HOM05D000880 ORTHO05D001950 4.5e-10 70.9 106 35.8
MBI13_g01685_MAGBIO Magnolia biondii HOM05D000880 ORTHO05D001950 2.2e-09 68.6 112 31.2
HPP92_017364 Vanilla planifolia HOM05D003382 ORTHO05D003930 1.4e-08 65.9 117 35.0
DCAR_017077 Daucus carota HOM05D000880 ORTHO05D009684 3.2e-08 64.7 72 45.8
MSTRG.13951 Avicennia marina HOM05D000880 ORTHO05D009684 4.2e-08 64.3 208 53.8
CSS0003109 Camellia sinensis var. sinensis HOM05D000880 ORTHO05D009684 3.0e-06 58.2 67 47.8
Cpa.g.sc10.208 Carica papaya HOM05D000880 ORTHO05D009684 3.9e-06 57.8 68 42.6


User provided reference genes

Program Settings