Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aa31LG10G7340 Aethionema arabicum HOM05D005926 ORTHO05D007001 0.0e+00 1246.9 656 100.0
AL5G32830 Arabidopsis lyrata HOM05D005926 ORTHO05D007001 2.7e-206 722.6 692 61.0
Sp5g10020 Schrenkiella parvula HOM05D005926 ORTHO05D007001 4.6e-206 721.8 692 61.3
Carub.0005s1860 Capsella rubella HOM05D005926 ORTHO05D007001 7.1e-199 698.0 696 59.9
AT3G52240 Arabidopsis thaliana HOM05D005926 ORTHO05D007001 8.1e-195 684.5 691 58.5
Thhalv10010215m.g Eutrema salsugineum HOM05D005926 ORTHO05D007001 4.9e-192 675.2 627 63.5
CARHR161990 Cardamine hirsuta HOM05D005926 ORTHO05D007001 9.0e-186 654.4 688 58.3
BcaB02g08582 Brassica carinata HOM05D005926 ORTHO05D007001 3.4e-177 625.9 694 56.8
A04p07120 Brassica napus HOM05D005926 ORTHO05D007001 2.2e-176 623.2 686 57.0
BraA04t16409Z Brassica rapa HOM05D005926 ORTHO05D007001 3.0e-173 612.8 687 56.6
BcaC02g09269 Brassica carinata HOM05D005926 ORTHO05D007001 1.5e-161 573.9 681 55.2
C04p40700 Brassica napus HOM05D005926 ORTHO05D007001 4.2e-159 565.8 682 54.8
A09p45300 Brassica napus HOM05D005926 ORTHO05D007001 2.2e-155 553.5 678 54.6
BolC4t25653H Brassica oleracea HOM05D005926 ORTHO05D007001 4.8e-155 552.4 665 54.9
BraA09t39993Z Brassica rapa HOM05D005926 ORTHO05D007001 4.5e-153 545.8 682 53.7
C08p27480 Brassica napus HOM05D005926 ORTHO05D007001 1.3e-152 544.3 679 53.5
BolC8t50365H Brassica oleracea HOM05D005926 ORTHO05D007001 1.3e-152 544.3 679 53.5
BcaC07g39594 Brassica carinata HOM05D005926 ORTHO05D007001 5.1e-141 505.8 679 51.3
THA.LOC104814724 Tarenaya hassleriana HOM05D005926 ORTHO05D007001 1.9e-119 434.1 716 46.1
Ciclev10030805m.g Citrus clementina HOM05D005926 ORTHO05D007001 7.4e-55 219.5 579 36.6
QL04p042256 Quercus lobata HOM05D005926 ORTHO05D007001 5.8e-52 209.9 560 34.5
CiPaw.14G029200 Carya illinoinensis HOM05D005926 ORTHO05D007001 1.3e-51 208.8 551 35.0
Atru.chr12.975 Acer truncatum HOM05D005926 ORTHO05D007001 2.9e-51 207.6 573 34.9
Thecc.10G111000 Theobroma cacao HOM05D005926 ORTHO05D007001 3.8e-51 207.2 665 31.7
Prupe.2G085400 Prunus persica HOM05D005926 ORTHO05D007001 1.1e-50 205.7 551 35.0
CsaV3_6G004110 Cucumis sativus L. HOM05D005926 ORTHO05D007001 1.9e-50 204.9 634 33.4
Duzib128G1763 Durio zibethinus HOM05D005926 ORTHO05D007001 9.3e-50 202.6 610 34.3
Gohir.A05G398500 Gossypium hirsutum HOM05D005926 ORTHO05D007001 3.5e-49 200.7 645 31.9
ClCG08G008140 Citrullus lanatus HOM05D005926 ORTHO05D007001 4.6e-49 200.3 642 33.5
Gohir.D04G017400 Gossypium hirsutum HOM05D005926 ORTHO05D007001 1.0e-48 199.1 655 31.3
COL.COLO4_06813 Corchorus olitorius HOM05D005926 ORTHO05D007001 5.1e-48 196.8 617 33.9
Gorai.012G020100 Gossypium raimondii HOM05D005926 ORTHO05D007001 6.7e-48 196.4 644 31.7
Manes.07G090100 Manihot esculenta HOM05D005926 ORTHO05D007001 1.5e-47 195.3 636 31.9
CANSAT56G4130 Cannabis sativa HOM05D005926 ORTHO05D007001 8.2e-46 189.5 598 32.3
MD07G1068100 Malus domestica HOM05D005926 ORTHO05D007001 5.3e-45 186.8 546 33.0
MD02G1248000 Malus domestica HOM05D005926 ORTHO05D007001 6.9e-45 186.4 553 33.1
Potri.008G025000 Populus trichocarpa HOM05D005926 ORTHO05D007001 2.6e-44 184.5 595 32.6
MELO3C019887.2 Cucumis melo HOM05D005926 ORTHO05D007001 3.4e-44 184.1 601 32.4
Duzib106G0448 Durio zibethinus HOM05D005926 ORTHO05D007001 1.7e-43 181.8 595 33.1
FvH4_7g05860 Fragaria vesca HOM05D005926 ORTHO05D007001 3.2e-42 177.6 600 31.0
PGR142G4330 Punica granatum HOM05D005926 ORTHO05D007001 4.2e-42 177.2 506 34.6
Lj5g0002236 Lotus japonicus HOM05D005926 ORTHO05D007001 5.5e-42 176.8 534 32.2
vmacro07227 Vaccinium macrocarpon HOM05D005926 ORTHO05D007001 5.5e-42 176.8 701 30.1
Sabra10G0182600 Salix brachista HOM05D005926 ORTHO05D007001 9.3e-42 176.0 346 40.5
Glyma.20G187800 Glycine max HOM05D005926 ORTHO05D007001 7.9e-41 172.9 531 32.8
RcHm_v2.0_Chr1g0333121 Rosa chinensis HOM05D005926 ORTHO05D007001 7.9e-41 172.9 600 31.7
FAN10G2760 Fragaria x ananassa HOM05D005926 ORTHO05D007001 1.3e-40 172.2 600 30.8
Eucgr.G02709 Eucalyptus grandis HOM05D005926 ORTHO05D007001 1.8e-40 171.8 593 31.5
Glyma.10G202600 Glycine max HOM05D005926 ORTHO05D007001 1.8e-40 171.8 536 33.6
FAN03G1852 Fragaria x ananassa HOM05D005926 ORTHO05D007001 8.7e-40 169.5 599 31.4
Nitab4.5_0001027g0040 Nicotiana tabacum HOM05D005926 ORTHO05D007001 8.7e-40 169.5 549 32.2
Cpa.g.sc19.23 Carica papaya HOM05D005926 ORTHO05D007001 1.9e-39 168.3 769 27.7
Nitab4.5_0003396g0030 Nicotiana tabacum HOM05D005926 ORTHO05D007001 1.9e-39 168.3 582 30.6
GSVIVG01034734001 Vitis vinifera HOM05D005926 ORTHO05D007001 5.7e-39 166.8 319 39.2
TWI63G0673 Tripterygium wilfordii HOM05D005926 ORTHO05D007001 9.7e-39 166.0 554 30.9
Phvul.007G104500 Phaseolus vulgaris HOM05D005926 ORTHO05D007001 2.8e-38 164.5 550 32.2
Lj2C28T9 Lonicera japonica HOM05D005926 ORTHO05D007001 3.7e-38 164.1 528 33.3
TPR.G2562 Trifolium pratense HOM05D005926 ORTHO05D007001 6.3e-38 163.3 538 30.7
Ca_10497_v3 Cicer arietinum L. HOM05D005926 ORTHO05D007001 1.8e-37 161.8 535 31.4
Peaxi162Scf00004g00119 Petunia axillaris HOM05D005926 ORTHO05D007001 2.4e-37 161.4 622 29.6
Psat6g176680 Pisum sativum HOM05D005926 ORTHO05D007001 4.1e-37 160.6 542 31.7
Lalb_Chr03g0036371 Lupinus albus HOM05D005926 ORTHO05D007001 2.6e-36 157.9 507 32.3
PGSC0003DMG400023487 Solanum tuberosum HOM05D005926 ORTHO05D007001 3.4e-36 157.5 507 31.8
Nn2g14047 Nelumbo nucifera HOM05D005926 ORTHO05D007001 7.7e-36 156.4 546 32.1
Sabra08G0016800 Salix brachista HOM05D005926 ORTHO05D007001 2.2e-35 154.8 591 30.6
CSS0031564 Camellia sinensis var. sinensis HOM05D005926 ORTHO05D007001 2.9e-35 154.5 632 28.6
Rhsim03G0105700 Rhododendron simsii HOM05D005926 ORTHO05D007001 2.9e-35 154.5 626 29.6
Cc02_g10060 Coffea canephora HOM05D005926 ORTHO05D007001 5.0e-35 153.7 626 30.7
Medtr1g492840 Medicago truncatula HOM05D005926 ORTHO05D007001 5.0e-35 153.7 690 26.8
TAR636G3019 Trochodendron aralioides HOM05D005926 ORTHO05D007001 8.5e-35 152.9 316 38.0
DCAR_014349 Daucus carota HOM05D005926 ORTHO05D007001 1.4e-34 152.1 507 33.7
Aqoxy2G01361 Aquilegia oxysepala HOM05D005926 ORTHO05D007001 5.5e-34 150.2 532 31.0
Haze_02593 Corylus avellana HOM05D005926 ORTHO05D007001 5.5e-34 150.2 292 41.8
arahy.Tifrunner.gnm1.ann1.J9ASUV Arachis hypogaea HOM05D005926 ORTHO05D007001 7.2e-34 149.8 528 31.2
CAN.G1550.12 Capsicum annuum HOM05D005926 ORTHO05D007001 7.2e-34 149.8 522 31.2
Nn6g35019 Nelumbo nucifera HOM05D005926 ORTHO05D007001 9.4e-34 149.4 562 29.7
Dinv30648 Davidia involucrata HOM05D005926 ORTHO05D007001 1.2e-33 149.1 716 27.9
Sopen05g033810 Solanum pennellii HOM05D005926 ORTHO05D007001 2.1e-33 148.3 536 30.8
CSS0031315 Camellia sinensis var. sinensis HOM05D005926 ORTHO05D007001 2.7e-33 147.9 714 28.4
Sed0009709 Sechium edule HOM05D005926 ORTHO05D007001 3.6e-33 147.5 547 30.7
Solyc05g055360.4 Solanum lycopersicum HOM05D005926 ORTHO05D007001 3.6e-33 147.5 531 30.1
Sc06g0002210 Simmondsia chinensis HOM05D005926 ORTHO05D007001 7.9e-33 146.4 327 37.0
HanXRQChr05g0147041 Helianthus annuus HOM05D005926 ORTHO05D007001 2.3e-32 144.8 505 33.5
SalBow6G1645 Salvia bowleyana HOM05D005926 ORTHO05D007001 2.3e-32 144.8 530 30.9
TAR369G1114 Trochodendron aralioides HOM05D005926 ORTHO05D007001 6.7e-32 143.3 356 36.2
PGSC0003DMG400027309 Solanum tuberosum HOM05D005926 ORTHO05D007001 4.3e-31 140.6 545 30.8
Actinidia18581 Actinidia chinensis HOM05D005926 ORTHO05D007001 1.7e-30 138.7 363 33.3
Nitab4.5_0002878g0030 Nicotiana tabacum HOM05D005926 ORTHO05D007001 2.2e-30 138.3 466 33.0
Lsat_1_v5_gn_6_90261 Lactuca sativa HOM05D005926 ORTHO05D007001 1.4e-29 135.6 520 32.1
Migut.F00893 Erythranthe guttata HOM05D005926 ORTHO05D007001 6.9e-29 133.3 527 29.0
TAR623G1319 Trochodendron aralioides HOM05D005926 ORTHO05D007001 3.4e-28 131.0 606 29.9
ECA232G4290 Erigeron canadensis HOM05D005926 ORTHO05D007001 4.5e-28 130.6 515 31.5
Aqoxy4G02869 Aquilegia oxysepala HOM05D005926 ORTHO05D007001 5.9e-28 130.2 559 30.9
Hma1.2p1_0010F.1_g007030 Hydrangea macrophylla HOM05D005926 ORTHO05D007001 5.9e-28 130.2 461 31.5
Nitab4.5_0012334g0010 Nicotiana tabacum HOM05D005926 ORTHO05D007001 5.9e-28 130.2 462 32.0
Solyc11g007510.2 Solanum lycopersicum HOM05D005926 ORTHO05D007001 2.2e-27 128.3 484 32.2
SGA_v2.0_scaffold62G21348 Striga asiatica HOM05D005926 ORTHO05D007001 2.2e-27 128.3 438 31.7
EL10Ac4g08669 Beta vulgaris HOM05D005926 ORTHO05D007001 6.5e-27 126.7 533 28.7
Ah.04g163700 Amaranthus hybridus HOM05D005926 ORTHO05D007001 1.1e-26 125.9 611 26.8
Sed0000046 Sechium edule HOM05D005926 ORTHO05D007001 4.2e-26 124.0 486 29.0
Sopen11g003350 Solanum pennellii HOM05D005926 ORTHO05D007001 7.2e-26 123.2 462 31.2
Actinidia28534 Actinidia chinensis HOM05D005926 ORTHO05D007001 2.7e-25 121.3 607 27.7
VMungo0720G0267 Vigna mungo HOM05D005926 ORTHO05D007001 6.7e-24 116.7 504 29.8
CSS0037332 Camellia sinensis var. sinensis HOM05D005926 ORTHO05D007001 1.3e-22 112.5 742 25.3
PSO339G4155 Papaver somniferum HOM05D005926 ORTHO05D007001 1.7e-22 112.1 516 29.8
PSO384G0761 Papaver somniferum HOM05D005926 ORTHO05D007001 2.8e-22 111.3 523 30.2
PSO443G0029 Papaver somniferum HOM05D005926 ORTHO05D007001 2.8e-22 111.3 294 34.7
Os05g0445800 Oryza sativa ssp. japonica HOM05D005926 ORTHO05D007001 6.3e-22 110.2 602 27.7
AUR62041545 Chenopodium quinoa HOM05D005926 ORTHO05D007001 5.3e-21 107.1 549 27.5
CSS0015422 Camellia sinensis var. sinensis HOM05D005926 ORTHO05D007001 7.0e-21 106.7 712 25.0
Os05g0446500 Oryza sativa ssp. japonica HOM05D005926 ORTHO05D007001 1.5e-18 99.0 368 28.5
arahy.Tifrunner.gnm1.ann1.9BC44J Arachis hypogaea HOM05D005926 ORTHO05D007001 2.1e-17 95.1 475 27.8
Zm00001eb147390 Zea mays HOM05D005926 ORTHO05D007001 1.8e-16 92.0 269 32.7
GSVIVG01031385001 Vitis vinifera HOM05D005926 ORTHO05D007001 5.2e-16 90.5 415 29.6
Dinv20819 Davidia involucrata HOM05D005926 ORTHO05D007001 2.0e-15 88.6 349 30.4
CDE04G2986 Ceratophyllum demersum HOM05D005926 ORTHO05D007001 4.4e-15 87.4 604 27.0
HPP92_002057 Vanilla planifolia HOM05D005926 ORTHO05D007001 1.1e-13 82.8 179 38.0
Zm00001eb289020 Zea mays HOM05D005926 ORTHO05D007001 1.6e-12 79.0 197 33.5
Os04g0646050 Oryza sativa ssp. japonica HOM05D005926 ORTHO05D007001 5.0e-11 73.9 150 36.7
unitig_0.g760 Utricularia gibba HOM05D005926 ORTHO05D007001 4.2e-10 70.9 280 27.5
ATR0820G003 Amborella trichopoda HOM05D005926 ORTHO05D007001 2.0e-07 62.0 554 25.3
arahy.Tifrunner.gnm1.ann1.UA3HQT Arachis hypogaea HOM05D005926 ORTHO05D007001 6.3e-06 57.0 250 31.2


User provided reference genes

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