Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aa31LG10G6870 Aethionema arabicum HOM05D007839 ORTHO05D009924 2.6e-147 525.4 273 100.0
CARHR128620 Cardamine hirsuta HOM05D007839 ORTHO05D009924 4.5e-115 418.3 276 79.7
AT2G34530 Arabidopsis thaliana HOM05D007839 ORTHO05D009924 1.1e-110 403.7 276 76.1
AL4G30500 Arabidopsis lyrata HOM05D007839 ORTHO05D009924 1.8e-108 396.4 276 75.4
Sp4g16790 Schrenkiella parvula HOM05D007839 ORTHO05D009924 7.0e-108 394.4 269 77.0
BcaB02g09533 Brassica carinata HOM05D007839 ORTHO05D009924 5.2e-103 378.3 267 73.8
BcaC02g11515 Brassica carinata HOM05D007839 ORTHO05D009924 2.8e-101 372.5 260 73.5
BolC4t23033H Brassica oleracea HOM05D007839 ORTHO05D009924 1.8e-100 369.8 270 71.5
BraA05t20061Z Brassica rapa HOM05D007839 ORTHO05D009924 1.0e-98 364.0 270 70.4
C04p63860 Brassica napus HOM05D007839 ORTHO05D009924 4.4e-94 348.6 274 69.0
BraA04t18149Z Brassica rapa HOM05D007839 ORTHO05D009924 4.4e-94 348.6 274 69.0
Carub.0004s1620 Capsella rubella HOM05D007839 ORTHO05D009924 9.1e-92 340.9 276 67.8
BcaB06g28780 Brassica carinata HOM05D007839 ORTHO05D009924 8.0e-88 327.8 260 67.7
THA.LOC104814297 Tarenaya hassleriana HOM05D007839 ORTHO05D009924 6.1e-80 301.6 286 57.3
C04p14500 Brassica napus HOM05D007839 ORTHO05D009924 2.3e-79 299.7 208 74.5
Thhalv10017730m.g Eutrema salsugineum HOM05D007839 ORTHO05D009924 2.2e-77 293.1 226 69.9
A05p11150 Brassica napus HOM05D007839 ORTHO05D009924 6.3e-77 291.6 208 72.6
BolC4t27853H Brassica oleracea HOM05D007839 ORTHO05D009924 3.1e-71 272.7 224 66.5
A04p26450 Brassica napus HOM05D007839 ORTHO05D009924 1.1e-49 201.1 134 77.6
TWI09G0569 Tripterygium wilfordii HOM05D007839 ORTHO05D009924 7.8e-43 178.3 272 39.7
Manes.17G069900 Manihot esculenta HOM05D007839 ORTHO05D009924 5.1e-42 175.6 266 39.8
CiPaw.09G123500 Carya illinoinensis HOM05D007839 ORTHO05D009924 6.6e-42 175.3 198 49.5
TWI73G0350 Tripterygium wilfordii HOM05D007839 ORTHO05D009924 8.7e-42 174.9 274 39.4
Cpa.g.sc166.6 Carica papaya HOM05D007839 ORTHO05D009924 1.1e-41 174.5 271 40.2
Cfa000944 Carpinus fangiana HOM05D007839 ORTHO05D009924 1.1e-41 174.5 272 41.2
TWI73G0663 Tripterygium wilfordii HOM05D007839 ORTHO05D009924 3.3e-41 172.9 276 38.8
Atru.chr10.1228 Acer truncatum HOM05D007839 ORTHO05D009924 4.3e-41 172.6 271 39.1
Haze_05595 Corylus avellana HOM05D007839 ORTHO05D009924 4.3e-41 172.6 270 40.4
Ciclev10017838m.g Citrus clementina HOM05D007839 ORTHO05D009924 7.3e-41 171.8 192 47.9
Potri.004G064800 Populus trichocarpa HOM05D007839 ORTHO05D009924 1.3e-40 171.0 263 39.9
CSS0048482 Camellia sinensis var. sinensis HOM05D007839 ORTHO05D009924 1.1e-39 167.9 259 40.2
MD10G1262200 Malus domestica HOM05D007839 ORTHO05D009924 1.5e-38 164.1 271 39.5
Sabra11G0067200 Salix brachista HOM05D007839 ORTHO05D009924 5.8e-38 162.2 264 36.4
MD05G1283900 Malus domestica HOM05D007839 ORTHO05D009924 7.6e-38 161.8 275 39.3
FAN25G1788 Fragaria x ananassa HOM05D007839 ORTHO05D009924 4.9e-37 159.1 268 41.0
QL05p058124 Quercus lobata HOM05D007839 ORTHO05D009924 6.4e-37 158.7 195 45.1
QL05p058196 Quercus lobata HOM05D007839 ORTHO05D009924 8.4e-37 158.3 262 36.6
Prupe.4G080500 Prunus persica HOM05D007839 ORTHO05D009924 1.1e-36 157.9 272 40.1
Sopen02g019500 Solanum pennellii HOM05D007839 ORTHO05D009924 6.0e-35 152.1 191 45.0
RcHm_v2.0_Chr5g0014141 Rosa chinensis HOM05D007839 ORTHO05D009924 1.7e-34 150.6 265 40.8
Sabra04G0043100 Salix brachista HOM05D007839 ORTHO05D009924 5.1e-34 149.1 263 37.6
FAN16G2540 Fragaria x ananassa HOM05D000499 ORTHO05D006980 1.1e-33 147.9 264 38.3
Peaxi162Scf00008g02916 Petunia axillaris HOM05D007839 ORTHO05D009924 5.6e-33 145.6 207 42.5
Duzib235G0881 Durio zibethinus HOM05D007839 ORTHO05D009924 4.8e-32 142.5 203 43.8
Thecc.06G150800 Theobroma cacao HOM05D007839 ORTHO05D009924 1.1e-31 141.4 272 36.4
MBI07_g43266_MAGBIO Magnolia biondii HOM05D007839 ORTHO05D009924 1.4e-31 141.0 245 36.3
HPP92_020033 Vanilla planifolia HOM05D007839 ORTHO05D009924 2.4e-31 140.2 210 40.5
FvH4_3g05560 Fragaria vesca HOM05D007839 ORTHO05D009924 5.3e-31 139.0 268 36.9
RcHm_v2.0_Chr5g0014111 Rosa chinensis HOM05D007839 ORTHO05D009924 6.9e-31 138.7 198 44.9
CANSAT35G0562 Cannabis sativa HOM05D007839 ORTHO05D009924 9.0e-31 138.3 195 44.1
PGSC0003DMG400021096 Solanum tuberosum HOM05D007839 ORTHO05D009924 3.4e-30 136.3 134 54.5
FAN11G2724 Fragaria x ananassa HOM05D000499 ORTHO05D006980 2.9e-29 133.3 226 38.1
Gohir.D06G142600 Gossypium hirsutum HOM05D007839 ORTHO05D009924 6.4e-29 132.1 196 40.3
Gohir.A06G137400 Gossypium hirsutum HOM05D007839 ORTHO05D009924 8.4e-29 131.7 196 40.3
arahy.Tifrunner.gnm1.ann1.EDFF2E Arachis hypogaea HOM05D007839 ORTHO05D009924 1.1e-28 131.3 129 51.9
Gorai.010G166400 Gossypium raimondii HOM05D007839 ORTHO05D009924 2.4e-28 130.2 196 39.8
COL.COLO4_31073 Corchorus olitorius HOM05D007839 ORTHO05D009924 1.3e-26 124.4 189 38.1
ClCG01G024620 Citrullus lanatus HOM05D007839 ORTHO05D009924 1.8e-26 124.0 205 37.1
Sed0023114 Sechium edule HOM05D007839 ORTHO05D009924 1.8e-26 124.0 198 37.4
Nitab4.5_0000869g0080 Nicotiana tabacum HOM05D007839 ORTHO05D009924 5.1e-26 122.5 234 35.0
Nitab4.5_0009201g0030 Nicotiana tabacum HOM05D007839 ORTHO05D009924 1.5e-25 120.9 188 38.8
CsaV3_6G051740 Cucumis sativus L. HOM05D007839 ORTHO05D009924 5.6e-25 119.0 275 28.4
GSVIVG01021451001 Vitis vinifera HOM05D007839 ORTHO05D009924 2.4e-23 113.6 189 37.0
Medtr2g019410 Medicago truncatula HOM05D007839 ORTHO05D009924 5.3e-23 112.5 190 38.4
GSVIVG01021458001 Vitis vinifera HOM05D007839 ORTHO05D009924 6.9e-23 112.1 126 50.8
Gorai.010G238500 Gossypium raimondii HOM05D007839 ORTHO05D009924 4.5e-22 109.4 272 32.4
Phvul.006G164900 Phaseolus vulgaris HOM05D007839 ORTHO05D009924 1.3e-21 107.8 193 38.9
MELO3C007133.2 Cucumis melo HOM05D007839 ORTHO05D009924 2.9e-21 106.7 263 30.0
CiPaw.09G123700 Carya illinoinensis HOM05D007839 ORTHO05D009924 7.9e-19 98.6 134 43.3
Glyma.15G094000 Glycine max HOM05D007839 ORTHO05D009924 1.0e-18 98.2 188 37.2
MBI07_g37165_MAGBIO Magnolia biondii HOM05D007839 ORTHO05D009924 2.3e-18 97.1 134 43.3
TPR.G11372 Trifolium pratense HOM05D007839 ORTHO05D009924 2.5e-17 93.6 130 44.6
ATR1091G096 Amborella trichopoda HOM05D000884 ORTHO05D002127 1.4e-15 87.8 134 38.8
ATR1091G017 Amborella trichopoda HOM05D007839 ORTHO05D009924 4.1e-15 86.3 254 29.9
Gohir.D06G204450 Gossypium hirsutum HOM05D007839 ORTHO05D009924 3.4e-14 83.2 177 35.6
CANSAT35G0336 Cannabis sativa HOM05D007839 ORTHO05D009924 7.6e-14 82.0 198 33.3
MBI07_g35861_MAGBIO Magnolia biondii HOM05D007839 ORTHO05D009924 6.5e-13 79.0 101 43.6
Haze_05600 Corylus avellana HOM05D007839 ORTHO05D009924 3.2e-12 76.6 354 26.3
arahy.Tifrunner.gnm1.ann1.9V8GBM Arachis hypogaea HOM05D007839 ORTHO05D009924 5.5e-12 75.9 101 41.6
ATR1091G011 Amborella trichopoda HOM05D007839 ORTHO05D009924 7.1e-12 75.5 121 38.0
ATR1091G114 Amborella trichopoda HOM05D007839 ORTHO05D009924 4.6e-11 72.8 165 31.5
Cpa.g.sc166.5 Carica papaya HOM05D008587 ORTHO05D010485 1.6e-08 64.3 148 32.4
Ciclev10016244m.g Citrus clementina HOM05D008587 ORTHO05D010485 3.7e-08 63.2 125 32.8
QL05p058141 Quercus lobata HOM05D008587 ORTHO05D010485 3.7e-08 63.2 135 31.9
Atru.chr10.1227 Acer truncatum HOM05D008587 ORTHO05D010485 3.1e-07 60.1 147 34.0
Manes.17G070000 Manihot esculenta HOM05D008587 ORTHO05D010485 3.1e-07 60.1 133 32.3
TWI73G0910 Tripterygium wilfordii HOM05D008587 ORTHO05D010485 1.5e-06 57.8 141 29.8
CANSAT35G1906 Cannabis sativa HOM05D007839 ORTHO05D009924 4.5e-06 56.2 271 24.0
CiPaw.09G123600 Carya illinoinensis HOM05D008587 ORTHO05D010485 5.9e-06 55.8 158 31.6
QL05p058191 Quercus lobata HOM05D008587 ORTHO05D010485 5.9e-06 55.8 116 33.6
Sabra04G0043200 Salix brachista HOM05D008587 ORTHO05D010485 5.9e-06 55.8 124 33.9


User provided reference genes

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