Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aa31LG10G6760 Aethionema arabicum HOM05D000529 ORTHO05D000472 5.3e-78 294.3 148 100.0
Aa31LG1G15460 Aethionema arabicum HOM05D000529 ORTHO05D000472 4.6e-29 131.7 121 66.1
Carub.0008s2759 Capsella rubella HOM05D000529 ORTHO05D000472 1.4e-22 110.2 123 55.3
BcaC04g23168 Brassica carinata HOM05D000529 ORTHO05D000472 2.4e-22 109.4 128 53.9
C09p11460 Brassica napus HOM05D000529 ORTHO05D000472 2.4e-22 109.4 128 53.9
BolC9t54031H Brassica oleracea HOM05D000529 ORTHO05D000472 2.4e-22 109.4 128 53.9
Sp2g29750 Schrenkiella parvula HOM05D000529 ORTHO05D000472 2.4e-22 109.4 123 51.2
BraA09t36615Z Brassica rapa HOM05D000529 ORTHO05D000472 2.1e-21 106.3 128 53.1
A09p09670 Brassica napus HOM05D000529 ORTHO05D000472 4.6e-21 105.1 128 53.1
AL8G44500 Arabidopsis lyrata HOM05D000529 ORTHO05D000472 7.8e-21 104.4 123 52.8
Thhalv10003662m.g Eutrema salsugineum HOM05D000529 ORTHO05D000472 3.0e-20 102.4 123 52.0
AT5G66900 Arabidopsis thaliana HOM05D000529 ORTHO05D000472 3.9e-20 102.1 123 51.2
CARHR177840 Cardamine hirsuta HOM05D000529 ORTHO05D000472 3.9e-20 102.1 126 49.2
CARHR289030 Cardamine hirsuta HOM05D000529 ORTHO05D000472 8.6e-20 100.9 121 48.8
BcaB04g20089 Brassica carinata HOM05D000529 ORTHO05D000472 1.5e-19 100.1 124 50.8
Sp2g29760 Schrenkiella parvula HOM05D000529 ORTHO05D000472 3.3e-19 99.0 122 51.6
BcaC04g23170 Brassica carinata HOM05D000529 ORTHO05D000472 4.3e-19 98.6 124 49.2
C09p11430 Brassica napus HOM05D000529 ORTHO05D000472 4.3e-19 98.6 124 49.2
Thhalv10005443m.g Eutrema salsugineum HOM05D000529 ORTHO05D000472 5.6e-19 98.2 121 52.1
Thhalv10020099m.g Eutrema salsugineum HOM05D000529 ORTHO05D000472 5.6e-19 98.2 123 48.8
A06p36590 Brassica napus HOM05D000529 ORTHO05D000472 3.6e-18 95.5 128 48.4
BraA06t26585Z Brassica rapa HOM05D000529 ORTHO05D000472 3.6e-18 95.5 128 48.4
BcaB04g20245 Brassica carinata HOM05D000529 ORTHO05D000472 4.7e-18 95.1 125 48.0
CARHR289650 Cardamine hirsuta HOM05D000529 ORTHO05D000472 1.1e-17 94.0 123 44.7
AT5G66910 Arabidopsis thaliana HOM05D000529 ORTHO05D000472 1.5e-16 90.1 122 48.4
BolC2t12530H Brassica oleracea HOM05D000529 ORTHO05D000472 1.5e-16 90.1 123 47.2
BolC2t10946H Brassica oleracea HOM05D000529 ORTHO05D000472 2.0e-16 89.7 121 46.3
A07p17000 Brassica napus HOM05D000529 ORTHO05D000472 2.6e-16 89.4 127 44.1
BraA07t29427Z Brassica rapa HOM05D000529 ORTHO05D000472 2.6e-16 89.4 127 44.1
C02p64690 Brassica napus HOM05D000529 ORTHO05D000472 9.9e-16 87.4 124 42.7
BcaB02g09973 Brassica carinata HOM05D000529 ORTHO05D000472 1.3e-15 87.0 127 43.3
BolC2t12531H Brassica oleracea HOM05D000529 ORTHO05D000472 1.7e-15 86.7 124 42.7
THA.LOC104819226 Tarenaya hassleriana HOM05D000529 ORTHO05D000472 1.7e-15 86.7 127 44.9
BcaB02g09974 Brassica carinata HOM05D000529 ORTHO05D000472 2.9e-15 85.9 117 46.2
A07p16990 Brassica napus HOM05D000529 ORTHO05D000472 3.7e-15 85.5 121 43.0
BcaC03g17818 Brassica carinata HOM05D000529 ORTHO05D000472 4.9e-15 85.1 124 46.0
C02p58420 Brassica napus HOM05D000529 ORTHO05D000472 4.9e-15 85.1 124 46.0
BcaB04g20091 Brassica carinata HOM05D000529 ORTHO05D000472 1.4e-14 83.6 121 45.5
CARHR292120 Cardamine hirsuta HOM05D000529 ORTHO05D000472 3.2e-14 82.4 109 51.4
BcaC06g34763 Brassica carinata HOM05D000529 ORTHO05D000472 5.4e-14 81.6 121 40.5
BraA02t08859Z Brassica rapa HOM05D000529 ORTHO05D000472 5.4e-14 81.6 123 44.7
BolC2t11904H Brassica oleracea HOM05D000529 ORTHO05D000472 1.6e-13 80.1 125 44.8
A02p38850 Brassica napus HOM05D000529 ORTHO05D000472 7.8e-13 77.8 123 43.9
AL8G44490 Arabidopsis lyrata HOM05D000529 ORTHO05D000472 8.6e-12 74.3 82 53.7
BolC7t43013H Brassica oleracea HOM05D000529 ORTHO05D000472 3.6e-10 68.9 81 46.9
C07p36810 Brassica napus HOM05D000529 ORTHO05D000472 4.7e-10 68.6 127 39.4
C07p24850 Brassica napus HOM05D000529 ORTHO05D000472 6.2e-10 68.2 83 44.6
Glyma.17G179200 Glycine max HOM05D000529 ORTHO05D000472 8.1e-10 67.8 127 36.2
BolC7t44194H Brassica oleracea HOM05D000529 ORTHO05D000472 2.4e-09 66.2 127 38.6
Glyma.05G082200 Glycine max HOM05D000529 ORTHO05D000472 3.1e-09 65.9 127 36.2
BcaB08g34626 Brassica carinata HOM05D000529 ORTHO05D000472 4.0e-09 65.5 128 41.4
Phvul.003G247200 Phaseolus vulgaris HOM05D000529 ORTHO05D000472 4.0e-09 65.5 128 35.2
RcHm_v2.0_Chr4g0411541 Rosa chinensis HOM05D000529 ORTHO05D000472 1.5e-08 63.5 124 33.9
CiPaw.01G024000 Carya illinoinensis HOM05D000529 ORTHO05D000472 3.4e-08 62.4 122 32.8
BolC7t44188H Brassica oleracea HOM05D000529 ORTHO05D000472 5.8e-08 61.6 129 39.5
Glyma.17G180100 Glycine max HOM05D000529 ORTHO05D000472 5.8e-08 61.6 127 34.6
Glyma.05G082400 Glycine max HOM05D000529 ORTHO05D000472 9.9e-08 60.8 128 32.8
Lj4g0014150 Lotus japonicus HOM05D000529 ORTHO05D000472 9.9e-08 60.8 127 35.4
Glyma.05G082500 Glycine max HOM05D000529 ORTHO05D000472 1.3e-07 60.5 127 33.9
TPR.G19002 Trifolium pratense HOM05D000529 ORTHO05D000472 1.3e-07 60.5 127 32.3
CiPaw.01G024100 Carya illinoinensis HOM05D000529 ORTHO05D000472 1.7e-07 60.1 132 32.6
Phvul.003G247300 Phaseolus vulgaris HOM05D000529 ORTHO05D000472 1.7e-07 60.1 128 34.4
Lj4g0013898 Lotus japonicus HOM05D000529 ORTHO05D000472 3.8e-07 58.9 128 33.6
CiPaw.01G024500 Carya illinoinensis HOM05D000529 ORTHO05D000472 6.4e-07 58.2 124 30.6
CiPaw.01G025000 Carya illinoinensis HOM05D000529 ORTHO05D000472 6.4e-07 58.2 124 30.6
CiPaw.01G025500 Carya illinoinensis HOM05D000529 ORTHO05D000472 8.4e-07 57.8 139 32.4
Lsat_1_v5_gn_9_123581 Lactuca sativa HOM05D000529 ORTHO05D000472 1.1e-06 57.4 122 31.1
MD15G1277700 Malus domestica HOM05D000529 ORTHO05D000472 1.1e-06 57.4 124 31.5
CiPaw.01G024200 Carya illinoinensis HOM05D000529 ORTHO05D000472 1.4e-06 57.0 132 31.8
CiPaw.01G025200 Carya illinoinensis HOM05D000529 ORTHO05D000472 1.4e-06 57.0 131 32.1
FAN23G2222 Fragaria x ananassa HOM05D000529 ORTHO05D000472 1.4e-06 57.0 125 33.6
VMungo0251G0147 Vigna mungo HOM05D000529 ORTHO05D000472 1.4e-06 57.0 135 34.8
VMungo0251G3007 Vigna mungo HOM05D000529 ORTHO05D000472 1.4e-06 57.0 128 34.4
FAN23G0179 Fragaria x ananassa HOM05D000529 ORTHO05D000472 1.9e-06 56.6 131 30.5
Actinidia12227 Actinidia chinensis HOM05D000529 ORTHO05D000472 2.4e-06 56.2 127 32.3
FvH4_1g15170 Fragaria vesca HOM05D000529 ORTHO05D000472 2.4e-06 56.2 123 33.3
FAN28G0376 Fragaria x ananassa HOM05D000529 ORTHO05D000472 2.4e-06 56.2 123 33.3
FAN28G1580 Fragaria x ananassa HOM05D000529 ORTHO05D000472 2.4e-06 56.2 123 33.3
Sabra07G0034700 Salix brachista HOM05D000529 ORTHO05D000472 2.4e-06 56.2 122 34.4
SEGI_34482 Sequoiadendron giganteum HOM05D000529 ORTHO05D000472 2.4e-06 56.2 127 30.7
GSVIVG01003566001 Vitis vinifera HOM05D000529 ORTHO05D000472 2.4e-06 56.2 127 32.3
GSVIVG01007144001 Vitis vinifera HOM05D000529 ORTHO05D000472 2.4e-06 56.2 127 32.3
C07p36780 Brassica napus HOM05D000529 ORTHO05D000472 3.2e-06 55.8 155 32.9
CANSAT01G0169 Cannabis sativa HOM05D000529 ORTHO05D000472 3.2e-06 55.8 127 29.9
CiPaw.01G103200 Carya illinoinensis HOM05D000529 ORTHO05D000472 3.2e-06 55.8 139 29.5
Glyma.17G180000 Glycine max HOM05D000529 ORTHO05D000472 3.2e-06 55.8 129 31.8
MD15G1278000 Malus domestica HOM05D000529 ORTHO05D000472 3.2e-06 55.8 123 32.5
VMungo0251G3107 Vigna mungo HOM05D000529 ORTHO05D000472 3.2e-06 55.8 123 31.7
Haze_15448 Corylus avellana HOM05D000529 ORTHO05D000472 4.2e-06 55.5 128 29.7
MD15G1277800 Malus domestica HOM05D000529 ORTHO05D000472 4.2e-06 55.5 122 32.8
Phvul.003G247651 Phaseolus vulgaris HOM05D000529 ORTHO05D000472 4.2e-06 55.5 128 31.2
Potri.007G038700 Populus trichocarpa HOM05D000529 ORTHO05D000472 4.2e-06 55.5 124 33.1
Prupe.7G139500 Prunus persica HOM05D000529 ORTHO05D000472 4.2e-06 55.5 123 34.1
Actinidia30857 Actinidia chinensis HOM05D000529 ORTHO05D000472 5.4e-06 55.1 126 31.7
DCAR_021434 Daucus carota HOM05D000529 ORTHO05D000472 5.4e-06 55.1 135 29.6
Lj4g0026036 Lotus japonicus HOM05D000529 ORTHO05D000472 5.4e-06 55.1 126 32.5
Manes.13G128600 Manihot esculenta HOM05D000529 ORTHO05D000472 5.4e-06 55.1 91 37.4
Prupe.7G139200 Prunus persica HOM05D000529 ORTHO05D000472 5.4e-06 55.1 122 32.8
Ca_22206_v3 Cicer arietinum L. HOM05D000529 ORTHO05D000472 7.1e-06 54.7 128 32.8
FvH4_1g15160 Fragaria vesca HOM05D000529 ORTHO05D000472 7.1e-06 54.7 125 31.2
FAN19G2597 Fragaria x ananassa HOM05D000529 ORTHO05D000472 7.1e-06 54.7 123 32.5
Glyma.17G179500 Glycine max HOM05D000529 ORTHO05D000472 7.1e-06 54.7 130 32.3
HanXRQChr02g0048181 Helianthus annuus HOM05D000529 ORTHO05D000472 7.1e-06 54.7 116 31.0
Sabra07G0031700 Salix brachista HOM05D000529 ORTHO05D000472 7.1e-06 54.7 82 40.2
Sabra07G0035000 Salix brachista HOM05D000529 ORTHO05D000472 7.1e-06 54.7 127 33.1
GSVIVG01003555001 Vitis vinifera HOM05D000529 ORTHO05D000472 7.1e-06 54.7 125 31.2
GSVIVG01003571001 Vitis vinifera HOM05D000529 ORTHO05D000472 7.1e-06 54.7 127 31.5
BraA06t27024Z Brassica rapa HOM05D000529 ORTHO05D000472 9.2e-06 54.3 152 34.9
CiPaw.01G025300 Carya illinoinensis HOM05D000529 ORTHO05D000472 9.2e-06 54.3 139 28.8
FAN28G0855 Fragaria x ananassa HOM05D000529 ORTHO05D000472 9.2e-06 54.3 122 33.6
Lj4g0017861 Lotus japonicus HOM05D000529 ORTHO05D000472 9.2e-06 54.3 81 39.5
MD15G1277400 Malus domestica HOM05D000529 ORTHO05D000472 9.2e-06 54.3 122 32.8
Manes.12G094100 Manihot esculenta HOM05D000529 ORTHO05D000472 9.2e-06 54.3 126 29.4
Prupe.7G138800 Prunus persica HOM05D000529 ORTHO05D000472 9.2e-06 54.3 122 31.1
RcHm_v2.0_Chr2g0104181 Rosa chinensis HOM05D000529 ORTHO05D000472 9.2e-06 54.3 149 28.2
TPR.G30540 Trifolium pratense HOM05D000529 ORTHO05D000472 9.2e-06 54.3 124 32.3


User provided reference genes

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