Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aa31LG10G60 Aethionema arabicum HOM05D004577 ORTHO05D005062 3.0e-57 224.9 112 100.0
AT1G56200 Arabidopsis thaliana HOM05D004577 ORTHO05D005062 9.4e-19 97.1 92 62.0
Sp1g41840 Schrenkiella parvula HOM05D004577 ORTHO05D005062 3.6e-18 95.1 87 62.1
Carub.0001s4488 Capsella rubella HOM05D004577 ORTHO05D005062 5.2e-17 91.3 99 57.6
CARHR045970 Cardamine hirsuta HOM05D004577 ORTHO05D005062 2.0e-16 89.4 91 62.6
AL1G64510 Arabidopsis lyrata HOM05D004577 ORTHO05D005062 2.6e-16 89.0 92 59.8
THA.LOC104826365 Tarenaya hassleriana HOM05D004577 ORTHO05D005062 2.4e-14 82.4 99 49.5
BolC4t23212H Brassica oleracea HOM05D004577 ORTHO05D005062 3.1e-14 82.0 90 55.6
A05p12690 Brassica napus HOM05D004577 ORTHO05D005062 7.0e-14 80.9 96 57.3
C04p16620 Brassica napus HOM05D004577 ORTHO05D005062 1.6e-13 79.7 90 56.7
Thhalv10011850m.g Eutrema salsugineum HOM05D004577 ORTHO05D005062 2.0e-13 79.3 41 90.2
BraA05t20207Z Brassica rapa HOM05D004577 ORTHO05D005062 2.7e-13 79.0 90 56.7
BcaB02g10507 Brassica carinata HOM05D004577 ORTHO05D005062 3.2e-11 72.0 90 55.6
Sp1g26310 Schrenkiella parvula HOM05D004577 ORTHO05D005062 6.1e-10 67.8 81 53.1
BcaNung05263 Brassica carinata HOM05D004577 ORTHO05D005062 1.8e-09 66.2 73 53.4
C07p15110 Brassica napus HOM05D004577 ORTHO05D005062 1.8e-09 66.2 64 54.7
BolC7t42015H Brassica oleracea HOM05D004577 ORTHO05D005062 1.8e-09 66.2 64 54.7
CARHR029880 Cardamine hirsuta HOM05D004577 ORTHO05D005062 1.8e-09 66.2 56 55.4
Manes.01G021500 Manihot esculenta HOM05D004577 ORTHO05D005062 1.8e-09 66.2 63 52.4
C03p76790 Brassica napus HOM05D004577 ORTHO05D005062 3.0e-09 65.5 72 51.4
BcaB03g13825 Brassica carinata HOM05D004577 ORTHO05D005062 4.0e-09 65.1 48 66.7
A07p09910 Brassica napus HOM05D004577 ORTHO05D005062 8.8e-09 63.9 48 66.7
BraA07t28780Z Brassica rapa HOM05D004577 ORTHO05D005062 1.5e-08 63.2 36 77.8
Eucgr.E00269 Eucalyptus grandis HOM05D004577 ORTHO05D005062 2.0e-08 62.8 100 39.0
Thhalv10008915m.g Eutrema salsugineum HOM05D004577 ORTHO05D005062 2.6e-08 62.4 63 58.7
A08p24420 Brassica napus HOM05D004577 ORTHO05D005062 3.4e-08 62.0 73 47.9
BraA08t34397Z Brassica rapa HOM05D004577 ORTHO05D005062 3.4e-08 62.0 73 47.9
PGR004G1013 Punica granatum HOM05D004577 ORTHO05D005062 3.4e-08 62.0 80 45.0
AL1G44500 Arabidopsis lyrata HOM05D004577 ORTHO05D005062 4.4e-08 61.6 38 71.1
AT1G30475 Arabidopsis thaliana HOM05D004577 ORTHO05D005062 5.7e-08 61.2 53 54.7
BcaC01g00196 Brassica carinata HOM05D004577 ORTHO05D005062 7.5e-08 60.8 74 50.0
BolC3t19933H Brassica oleracea HOM05D004577 ORTHO05D005062 7.5e-08 60.8 74 50.0
Carub.0001s2869 Capsella rubella HOM05D004577 ORTHO05D005062 1.7e-07 59.7 39 71.8
Thecc.07G153300 Theobroma cacao HOM05D004577 ORTHO05D005062 2.8e-07 58.9 64 51.6
ClCG10G003880 Citrullus lanatus HOM05D004577 ORTHO05D005062 3.7e-07 58.5 90 45.6
ClCG10G004020 Citrullus lanatus HOM05D004577 ORTHO05D005062 3.7e-07 58.5 90 45.6
ClCG10G004040 Citrullus lanatus HOM05D004577 ORTHO05D005062 3.7e-07 58.5 90 45.6
Solyc04g051850.3 Solanum lycopersicum HOM05D004577 ORTHO05D005062 3.7e-07 58.5 39 69.2
PGSC0003DMG400016552 Solanum tuberosum HOM05D004577 ORTHO05D005062 3.7e-07 58.5 39 69.2
THA.LOC104798603 Tarenaya hassleriana HOM05D004577 ORTHO05D005062 3.7e-07 58.5 36 66.7
Sopen04g023180 Solanum pennellii HOM05D004577 ORTHO05D005062 4.8e-07 58.2 39 69.2
Duzib187G1448 Durio zibethinus HOM05D004577 ORTHO05D005062 6.3e-07 57.8 64 51.6
CiPaw.11G206900 Carya illinoinensis HOM05D004577 ORTHO05D005062 8.3e-07 57.4 106 40.6
Manes.05G118000 Manihot esculenta HOM05D004577 ORTHO05D005062 8.3e-07 57.4 61 54.1
MELO3C014068.2 Cucumis melo HOM05D004577 ORTHO05D005062 1.1e-06 57.0 57 52.6
Duzib268G0228 Durio zibethinus HOM05D004577 ORTHO05D005062 1.1e-06 57.0 62 54.8
Solyc08g006050.2 Solanum lycopersicum HOM05D004577 ORTHO05D005062 1.8e-06 56.2 50 60.0
Sopen08g002020 Solanum pennellii HOM05D004577 ORTHO05D005062 1.8e-06 56.2 46 60.9
PGSC0003DMG400014846 Solanum tuberosum HOM05D004577 ORTHO05D005062 2.4e-06 55.8 46 60.9
CsaV3_3G003860 Cucumis sativus L. HOM05D004577 ORTHO05D005062 3.1e-06 55.5 47 57.4
Nitab4.5_0000904g0010 Nicotiana tabacum HOM05D004577 ORTHO05D005062 3.1e-06 55.5 38 65.8
Peaxi162Scf00359g00123 Petunia axillaris HOM05D004577 ORTHO05D005062 3.1e-06 55.5 38 65.8
Gohir.D07G172500 Gossypium hirsutum HOM05D004577 ORTHO05D005062 5.4e-06 54.7 48 58.3
Potri.011G163900 Populus trichocarpa HOM05D004577 ORTHO05D005062 7.0e-06 54.3 77 46.8
Gohir.A01G038800 Gossypium hirsutum HOM05D004577 ORTHO05D005062 9.1e-06 53.9 48 58.3
Sabra11G0141000 Salix brachista HOM05D002312 ORTHO05D006455 9.1e-06 53.9 102 39.2


User provided reference genes

Program Settings