Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aa31LG10G5730 Aethionema arabicum HOM05D008385 ORTHO05D010806 7.6e-83 310.5 157 100.0
Aa31LG10G5760 Aethionema arabicum HOM05D008385 ORTHO05D010806 4.1e-44 181.8 141 65.2
Thhalv10012260m.g Eutrema salsugineum HOM05D008385 ORTHO05D001819 2.6e-22 109.4 141 42.6
C03p36070 Brassica napus HOM05D008385 ORTHO05D010806 6.5e-18 94.7 137 40.1
Aa31LG10G5780 Aethionema arabicum HOM05D000036 ORTHO05D001038 2.5e-17 92.8 141 41.1
Aa31LG10G5700 Aethionema arabicum HOM05D008385 ORTHO05D001819 4.7e-16 88.6 133 36.8
Aa31LG10G5770 Aethionema arabicum HOM05D003146 ORTHO05D001819 8.0e-16 87.8 111 38.7
THA.LOC104802648 Tarenaya hassleriana HOM05D003146 ORTHO05D001819 1.4e-15 87.0 133 37.6
Carub.0006s3013 Capsella rubella HOM05D008385 ORTHO05D010806 1.8e-15 86.7 132 37.1
Thhalv10012028m.g Eutrema salsugineum HOM05D008385 ORTHO05D010806 5.2e-15 85.1 144 36.1
A03p29810 Brassica napus HOM05D008385 ORTHO05D001819 3.4e-14 82.4 127 37.0
Aa31LG10G5720 Aethionema arabicum HOM05D008385 ORTHO05D001819 4.4e-14 82.0 126 37.3
Aa31LG10G5710 Aethionema arabicum HOM05D008385 ORTHO05D010806 3.7e-13 79.0 133 33.8
C01p18190 Brassica napus HOM05D008385 ORTHO05D010806 1.4e-12 77.0 133 36.1
Carub.0008s1111 Capsella rubella HOM05D008385 ORTHO05D010806 1.4e-12 77.0 138 34.1
THA.LOC104802649 Tarenaya hassleriana HOM05D003146 ORTHO05D001819 2.4e-12 76.3 136 34.6
Carub.0004s0393 Capsella rubella HOM05D008385 ORTHO05D010806 3.1e-12 75.9 133 34.6
THA.LOC104803096 Tarenaya hassleriana HOM05D003146 ORTHO05D001819 5.4e-12 75.1 130 36.2
C01p18170 Brassica napus HOM05D008385 ORTHO05D010806 7.0e-12 74.7 133 35.3
BolC1t01744H Brassica oleracea HOM05D008385 ORTHO05D010806 7.0e-12 74.7 133 35.3
A01p14670 Brassica napus HOM05D008385 ORTHO05D010806 9.2e-12 74.3 133 34.6
A01p14680 Brassica napus HOM05D008385 ORTHO05D010806 9.2e-12 74.3 133 35.3
AT1G11362 Arabidopsis thaliana HOM05D008385 ORTHO05D010806 2.0e-11 73.2 131 35.1
BraA01t01408Z Brassica rapa HOM05D008385 ORTHO05D010806 2.7e-11 72.8 133 34.6
A08p33500 Brassica napus HOM05D008385 ORTHO05D010806 4.5e-11 72.0 133 35.3
BraA08t35266Z Brassica rapa HOM05D008385 ORTHO05D010806 4.5e-11 72.0 133 35.3
AT1G50340 Arabidopsis thaliana HOM05D008385 ORTHO05D010806 2.3e-10 69.7 89 41.6
Carub.0002s0689 Capsella rubella HOM05D008385 ORTHO05D010806 1.1e-09 67.4 107 35.5
Carub.0008s1110 Capsella rubella HOM05D008385 ORTHO05D010806 1.1e-09 67.4 131 33.6
Carub.0001s2729 Capsella rubella HOM05D008385 ORTHO05D010806 1.5e-09 67.0 134 32.8
THA.LOC104820282 Tarenaya hassleriana HOM05D003146 ORTHO05D001819 1.9e-09 66.6 141 34.0
THA.LOC104825373 Tarenaya hassleriana HOM05D003146 ORTHO05D001819 2.5e-09 66.2 143 35.0
BolC8t49085H Brassica oleracea HOM05D008385 ORTHO05D010806 3.3e-09 65.9 133 33.8
A08p15720 Brassica napus HOM05D008385 ORTHO05D010806 5.6e-09 65.1 132 36.4
BraA01t01407Z Brassica rapa HOM05D008385 ORTHO05D010806 5.6e-09 65.1 138 31.2
AL1G58570 Arabidopsis lyrata HOM05D008385 ORTHO05D010806 7.3e-09 64.7 138 33.3
C08p14420 Brassica napus HOM05D008385 ORTHO05D010806 9.5e-09 64.3 133 33.1
THA.LOC104816708 Tarenaya hassleriana HOM05D003146 ORTHO05D001819 1.2e-08 63.9 141 34.0
THA.LOC104817105 Tarenaya hassleriana HOM05D003146 ORTHO05D001819 1.2e-08 63.9 141 34.0
AT1G48010 Arabidopsis thaliana HOM05D008385 ORTHO05D001819 2.1e-08 63.2 105 35.2
CARHR092490 Cardamine hirsuta HOM05D003146 ORTHO05D001819 2.8e-08 62.8 139 30.2
Thhalv10009973m.g Eutrema salsugineum HOM05D008385 ORTHO05D010806 3.6e-08 62.4 134 33.6
THA.LOC104808963 Tarenaya hassleriana HOM05D003146 ORTHO05D001819 3.6e-08 62.4 137 32.8
Carub.0001s1097 Capsella rubella HOM05D008385 ORTHO05D010806 4.7e-08 62.0 124 30.6
Carub.0001s1211 Capsella rubella HOM05D008385 ORTHO05D010806 6.1e-08 61.6 138 30.4
Carub.0001s1209 Capsella rubella HOM05D008385 ORTHO05D010806 8.0e-08 61.2 129 31.0
Phvul.001G038100 Phaseolus vulgaris HOM05D018574 ORTHO05D001819 1.8e-07 60.1 99 32.3
AT4G03945 Arabidopsis thaliana HOM05D008385 ORTHO05D010806 2.3e-07 59.7 135 31.1
CsaV3_6G022330 Cucumis sativus L. HOM05D003146 ORTHO05D001819 6.8e-07 58.2 119 31.1
Thhalv10027565m.g Eutrema salsugineum HOM05D008385 ORTHO05D010806 6.8e-07 58.2 132 28.8
CsaV3_6G020170 Cucumis sativus L. HOM05D003146 ORTHO05D001819 1.2e-06 57.4 107 30.8
AL3G30250 Arabidopsis lyrata HOM05D003146 ORTHO05D001819 1.5e-06 57.0 108 31.5
Glyma.16G055300 Glycine max HOM05D003146 ORTHO05D001819 2.6e-06 56.2 124 29.8
MELO3C030065.2 Cucumis melo HOM05D003146 ORTHO05D001819 3.4e-06 55.8 104 29.8
Hma1.2p1_1096F.1_g256660 Hydrangea macrophylla HOM05D003146 ORTHO05D001819 3.4e-06 55.8 136 28.7
CsaV3_4G038000 Cucumis sativus L. HOM05D003146 ORTHO05D001819 4.4e-06 55.5 104 30.8
CsaV3_6G023780 Cucumis sativus L. HOM05D003146 ORTHO05D001819 4.4e-06 55.5 104 30.8
CsaV3_UNG007100 Cucumis sativus L. HOM05D003146 ORTHO05D001819 4.4e-06 55.5 104 30.8
CsaV3_UNG217460 Cucumis sativus L. HOM05D003146 ORTHO05D001819 4.4e-06 55.5 104 30.8
CsaV3_UNG225750 Cucumis sativus L. HOM05D003146 ORTHO05D001819 4.4e-06 55.5 104 30.8
CsaV3_UNG235420 Cucumis sativus L. HOM05D003146 ORTHO05D001819 4.4e-06 55.5 104 30.8
AL1G54520 Arabidopsis lyrata HOM05D003146 ORTHO05D001819 5.8e-06 55.1 82 35.4
MELO3C019866.2 Cucumis melo HOM05D003146 ORTHO05D001819 5.8e-06 55.1 104 32.7
MELO3C019867.2 Cucumis melo HOM05D003146 ORTHO05D001819 5.8e-06 55.1 97 33.0
VMungo1383G0905 Vigna mungo HOM05D003146 ORTHO05D001819 5.8e-06 55.1 104 29.8
CsaV3_UNG084670 Cucumis sativus L. HOM05D003146 ORTHO05D001819 7.5e-06 54.7 118 30.5
CsaV3_UNG132030 Cucumis sativus L. HOM05D003146 ORTHO05D001819 7.5e-06 54.7 118 30.5
AT1G11593 Arabidopsis thaliana HOM05D008385 ORTHO05D010806 9.8e-06 54.3 137 30.7
AT3G27999 Arabidopsis thaliana HOM05D008385 ORTHO05D010806 9.8e-06 54.3 137 30.7
MELO3C025842.2 Cucumis melo HOM05D003146 ORTHO05D001819 9.8e-06 54.3 119 30.3


User provided reference genes

Program Settings