Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aa31LG10G5380 Aethionema arabicum HOM05D006487 ORTHO05D007982 5.2e-151 537.7 278 100.0
AL1G54980 Arabidopsis lyrata HOM05D006487 ORTHO05D007982 7.4e-81 304.7 238 72.3
Sp1g35330 Schrenkiella parvula HOM05D006487 ORTHO05D007982 1.8e-79 300.1 239 70.7
Thhalv10011620m.g Eutrema salsugineum HOM05D006487 ORTHO05D007982 3.1e-79 299.3 240 70.8
A08p04750 Brassica napus HOM05D006487 ORTHO05D007982 1.7e-77 293.5 247 69.2
BraA08t32504Z Brassica rapa HOM05D006487 ORTHO05D007982 1.7e-77 293.5 247 69.2
AT1G48380 Arabidopsis thaliana HOM05D006487 ORTHO05D007982 1.9e-76 290.0 247 69.2
Carub.0001s3750 Capsella rubella HOM05D006487 ORTHO05D007982 1.9e-76 290.0 239 70.3
CARHR037990 Cardamine hirsuta HOM05D006487 ORTHO05D007982 2.5e-76 289.7 237 69.6
BcaC07g37138 Brassica carinata HOM05D006487 ORTHO05D007982 6.7e-74 281.6 242 66.5
C08p05120 Brassica napus HOM05D006487 ORTHO05D007982 1.1e-73 280.8 244 66.4
BcaB04g17434 Brassica carinata HOM05D006487 ORTHO05D007982 1.9e-73 280.0 238 68.1
BolC8t47322H Brassica oleracea HOM05D006487 ORTHO05D007982 1.3e-72 277.3 241 66.8
THA.LOC104820327 Tarenaya hassleriana HOM05D006487 ORTHO05D007982 9.4e-60 234.6 237 59.9
Peaxi162Scf00171g00242 Petunia axillaris HOM05D006487 ORTHO05D007982 3.1e-47 193.0 222 48.2
CAN.G929.21 Capsicum annuum HOM05D006487 ORTHO05D007982 9.1e-47 191.4 224 49.1
Hma1.2p1_0989F.1_g244820 Hydrangea macrophylla HOM05D006487 ORTHO05D007982 1.6e-46 190.7 250 48.0
Nitab4.5_0003040g0090 Nicotiana tabacum HOM05D006487 ORTHO05D007982 2.6e-46 189.9 223 48.9
Solyc03g098620.3 Solanum lycopersicum HOM05D006487 ORTHO05D007982 3.5e-46 189.5 224 48.7
Sopen03g029330 Solanum pennellii HOM05D006487 ORTHO05D007982 4.5e-46 189.1 224 48.2
COL.COLO4_24904 Corchorus olitorius HOM05D006487 ORTHO05D007982 2.9e-45 186.4 226 46.9
GSVIVG01027119001 Vitis vinifera HOM05D006487 ORTHO05D007982 2.9e-45 186.4 229 47.6
Gohir.A08G225300 Gossypium hirsutum HOM05D006487 ORTHO05D007982 5.0e-45 185.7 256 45.3
Nitab4.5_0000782g0060 Nicotiana tabacum HOM05D006487 ORTHO05D007982 8.5e-45 184.9 224 48.7
Thecc.05G197400 Theobroma cacao HOM05D006487 ORTHO05D007982 8.5e-45 184.9 260 45.8
PGR083G2465 Punica granatum HOM05D006487 ORTHO05D007982 1.5e-44 184.1 241 44.8
PGSC0003DMG400010175 Solanum tuberosum HOM05D006487 ORTHO05D007982 1.5e-44 184.1 224 47.8
Actinidia34682 Actinidia chinensis HOM05D006487 ORTHO05D007982 1.9e-44 183.7 250 45.2
Psat1g121120 Pisum sativum HOM05D006487 ORTHO05D007982 1.9e-44 183.7 237 49.4
TPR.G19888 Trifolium pratense HOM05D006487 ORTHO05D007982 1.9e-44 183.7 243 48.6
arahy.Tifrunner.gnm1.ann1.FG107U Arachis hypogaea HOM05D006487 ORTHO05D007982 4.2e-44 182.6 245 44.9
Ciclev10020398m.g Citrus clementina HOM05D006487 ORTHO05D007982 4.2e-44 182.6 244 45.5
Dinv03426 Davidia involucrata HOM05D006487 ORTHO05D007982 7.2e-44 181.8 241 46.5
TWI81G0553 Tripterygium wilfordii HOM05D006487 ORTHO05D007982 9.4e-44 181.4 262 42.7
Cfa017861 Carpinus fangiana HOM05D006487 ORTHO05D007982 2.7e-43 179.9 260 44.2
PSO782G2052 Papaver somniferum HOM05D006487 ORTHO05D007982 3.6e-43 179.5 249 45.0
Lj2g0009690 Lotus japonicus HOM05D006487 ORTHO05D007982 4.7e-43 179.1 259 45.9
Lalb_Chr22g0353991 Lupinus albus HOM05D006487 ORTHO05D007982 8.0e-43 178.3 248 45.6
Phvul.004G139000 Phaseolus vulgaris HOM05D006487 ORTHO05D007982 8.0e-43 178.3 254 44.9
SGA_v2.0_scaffold90G27746 Striga asiatica HOM05D006487 ORTHO05D007982 8.0e-43 178.3 238 45.8
Gohir.D08G245700 Gossypium hirsutum HOM05D006487 ORTHO05D007982 1.4e-42 177.6 256 43.8
Lsat_1_v5_gn_0_10541 Lactuca sativa HOM05D006487 ORTHO05D007982 1.4e-42 177.6 228 46.9
FAN13G0937 Fragaria x ananassa HOM05D006487 ORTHO05D007982 1.8e-42 177.2 233 44.6
Gorai.004G262200 Gossypium raimondii HOM05D006487 ORTHO05D007982 1.8e-42 177.2 256 43.4
Manes.02G218400 Manihot esculenta HOM05D006487 ORTHO05D007982 1.8e-42 177.2 183 54.6
Glyma.16G213000 Glycine max HOM05D006487 ORTHO05D007982 4.0e-42 176.0 249 45.4
Hma1.2p1_0989F.1_g244830 Hydrangea macrophylla HOM05D006487 ORTHO05D007982 4.0e-42 176.0 159 58.5
Aqoxy3G04297 Aquilegia oxysepala HOM05D006487 ORTHO05D007982 5.2e-42 175.6 243 43.2
arahy.Tifrunner.gnm1.ann1.49K0I5 Arachis hypogaea HOM05D006487 ORTHO05D007982 6.8e-42 175.3 245 43.7
VMungo0464G1082 Vigna mungo HOM05D006487 ORTHO05D007982 6.8e-42 175.3 240 45.4
Haze_18332 Corylus avellana HOM05D006487 ORTHO05D007982 8.8e-42 174.9 284 40.8
PSO063G4419 Papaver somniferum HOM05D006487 ORTHO05D007982 2.0e-41 173.7 249 44.6
Migut.O00267 Erythranthe guttata HOM05D006487 ORTHO05D007982 2.6e-41 173.3 243 44.9
TAR629G0717 Trochodendron aralioides HOM05D006487 ORTHO05D007982 2.6e-41 173.3 256 44.5
Ca_11836_v3 Cicer arietinum L. HOM05D006487 ORTHO05D007982 4.4e-41 172.6 240 45.8
Sed0005317 Sechium edule HOM05D006487 ORTHO05D007982 4.4e-41 172.6 262 45.4
Glyma.09G164600 Glycine max HOM05D006487 ORTHO05D007982 5.7e-41 172.2 254 43.3
Medtr6g077860 Medicago truncatula HOM05D006487 ORTHO05D007982 7.5e-41 171.8 244 45.5
FvH4_5g18410 Fragaria vesca HOM05D006487 ORTHO05D007982 1.3e-40 171.0 256 41.0
MD14G1245900 Malus domestica HOM05D006487 ORTHO05D007982 1.3e-40 171.0 180 52.2
CANSAT64G1132 Cannabis sativa HOM05D006487 ORTHO05D007982 1.7e-40 170.6 264 42.0
Rhsim08G0124800 Rhododendron simsii HOM05D006487 ORTHO05D007982 1.7e-40 170.6 154 56.5
QL10p034099 Quercus lobata HOM05D006487 ORTHO05D007982 2.2e-40 170.2 268 40.7
MSTRG.23212 Avicennia marina HOM05D006487 ORTHO05D007982 2.8e-40 169.9 225 45.3
Potri.004G069400 Populus trichocarpa HOM05D006487 ORTHO05D007982 2.8e-40 169.9 248 43.5
MBI06_g27513_MAGBIO Magnolia biondii HOM05D006487 ORTHO05D007982 6.3e-40 168.7 244 43.4
HanXRQChr15g0492111 Helianthus annuus HOM05D006487 ORTHO05D007982 8.3e-40 168.3 224 44.6
Oeu023551.1 Olea europaea HOM05D006487 ORTHO05D007982 1.4e-39 167.5 247 41.3
Prupe.5G243800 Prunus persica HOM05D006487 ORTHO05D007982 1.4e-39 167.5 259 40.5
FAN18G0592 Fragaria x ananassa HOM05D006487 ORTHO05D007982 2.4e-39 166.8 221 44.3
Cpa.g.sc168.16 Carica papaya HOM05D006487 ORTHO05D007982 7.0e-39 165.2 146 56.2
CiPaw.16G073400 Carya illinoinensis HOM05D006487 ORTHO05D007982 7.0e-39 165.2 259 42.1
DCAR_011682 Daucus carota HOM05D006487 ORTHO05D007982 1.2e-38 164.5 238 42.4
Nn4g25081 Nelumbo nucifera HOM05D006487 ORTHO05D007982 2.7e-38 163.3 261 43.7
Atru.chr9.84 Acer truncatum HOM05D006487 ORTHO05D007982 5.9e-38 162.2 146 53.4
CsaV3_1G007510 Cucumis sativus L. HOM05D006487 ORTHO05D007982 1.3e-37 161.0 262 44.3
FAN08G3399 Fragaria x ananassa HOM05D006487 ORTHO05D007982 1.3e-37 161.0 234 43.2
MELO3C002168.2 Cucumis melo HOM05D006487 ORTHO05D007982 2.2e-37 160.2 266 43.2
RcHm_v2.0_Chr7g0177071 Rosa chinensis HOM05D006487 ORTHO05D007982 3.8e-37 159.5 267 38.2
SalBow5G2999 Salvia bowleyana HOM05D006487 ORTHO05D007982 6.5e-37 158.7 258 39.9
AUR62040775 Chenopodium quinoa HOM05D006487 ORTHO05D007982 1.5e-36 157.5 176 51.7
AUR62033020 Chenopodium quinoa HOM05D006487 ORTHO05D007982 1.9e-36 157.1 227 44.5
ClCG01G014820 Citrullus lanatus HOM05D006487 ORTHO05D007982 4.0e-34 149.4 150 53.3
Sc07g0007560 Simmondsia chinensis HOM05D006487 ORTHO05D007982 3.4e-33 146.4 225 41.3
Sabra04G0046600 Salix brachista HOM05D006487 ORTHO05D007982 4.4e-33 146.0 291 36.4
Zm00001eb271770 Zea mays HOM05D006487 ORTHO05D007982 1.3e-32 144.4 231 42.0
Cc04_g08450 Coffea canephora HOM05D006487 ORTHO05D007982 2.8e-32 143.3 251 39.4
Os07g0172200 Oryza sativa ssp. japonica HOM05D006487 ORTHO05D007982 6.3e-32 142.1 226 42.5
vmacro17744 Vaccinium macrocarpon HOM05D006487 ORTHO05D007982 4.1e-31 139.4 220 37.7
ATR0618G270 Amborella trichopoda HOM05D006487 ORTHO05D007982 2.7e-30 136.7 261 36.4
Eucgr.H00648 Eucalyptus grandis HOM05D006487 ORTHO05D007982 2.7e-30 136.7 111 55.9
HPP92_014774 Vanilla planifolia HOM05D006487 ORTHO05D007982 5.9e-30 135.6 237 37.1
Prupe.4G244900 Prunus persica HOM05D006487 ORTHO05D007982 3.8e-29 132.9 148 48.0
Mapoly0080s0074 Marchantia polymorpha HOM05D006487 ORTHO05D007982 4.2e-28 129.4 168 43.5
Lj9A412T44 Lonicera japonica HOM05D006487 ORTHO05D007982 9.5e-28 128.3 268 35.4
BcaC05g27591 Brassica carinata HOM05D006487 ORTHO05D007982 1.2e-27 127.9 119 63.9
SMO117G0078 Selaginella moellendorffii HOM05D006487 ORTHO05D007982 1.0e-26 124.8 150 43.3
EL10Ac8g19478 Beta vulgaris HOM05D006487 ORTHO05D007982 6.8e-26 122.1 247 36.0
SEGI_16734 Sequoiadendron giganteum HOM05D006487 ORTHO05D007982 7.5e-25 118.6 242 31.8
AagrBONN_evm.TU.Sc2ySwM_228.567 Anthoceros agrestis HOM05D006487 ORTHO05D007982 9.8e-25 118.2 175 36.6
CDE04G1004 Ceratophyllum demersum HOM05D006487 ORTHO05D007982 1.1e-23 114.8 248 34.3
Pp3c5_25480 Physcomitrium patens HOM05D006487 ORTHO05D007982 3.2e-23 113.2 214 32.2
Pp3c25_9140 Physcomitrium patens HOM05D006487 ORTHO05D007982 4.5e-22 109.4 222 34.2
Hund22367 Selenicereus undatus HOM05D006487 ORTHO05D007982 1.1e-20 104.8 175 39.4
FAN04G2664 Fragaria x ananassa HOM05D006487 ORTHO05D007982 5.6e-20 102.4 220 35.9
Ca_30285_v3 Cicer arietinum L. HOM05D006487 ORTHO05D007982 9.5e-20 101.7 187 41.2
BcaC05g27879 Brassica carinata HOM05D024450 ORTHO05D007982 3.4e-17 93.2 88 61.4
TAR629G1006 Trochodendron aralioides HOM05D006487 ORTHO05D007982 4.6e-14 82.8 44 79.5
FAN09G4505 Fragaria x ananassa HOM05D006487 ORTHO05D007982 7.3e-12 75.5 43 72.1
Cre13.g576500 Chlamydomonas reinhardtii HOM05D006487 ORTHO05D007982 9.5e-12 75.1 83 42.2
FAN09G0815 Fragaria x ananassa HOM05D006487 ORTHO05D007982 1.6e-11 74.3 39 76.9
Prupe.2G315400 Prunus persica HOM05D006487 ORTHO05D007982 4.7e-11 72.8 152 34.9
PRCOL_00006754 Prasinoderma coloniale HOM05D006487 ORTHO05D007982 3.1e-10 70.1 67 47.8
CSS0035874 Camellia sinensis var. sinensis HOM05D006487 ORTHO05D007982 9.8e-09 65.1 240 29.6
A10p09420 Brassica napus HOM05D024450 ORTHO05D033433 5.4e-07 59.3 48 64.6
BraA10t43019Z Brassica rapa HOM05D024450 ORTHO05D033731 5.4e-07 59.3 48 64.6
SMO117G0021 Selaginella moellendorffii HOM05D006487 ORTHO05D007982 7.1e-07 58.9 140 32.1
C05p35710 Brassica napus HOM05D024450 ORTHO05D033433 1.2e-06 58.2 48 64.6
ECA232G2176 Erigeron canadensis HOM05D006487 ORTHO05D007982 4.6e-06 56.2 165 32.7
MCO12G143 Micromonas commoda HOM05D006487 ORTHO05D007982 6.0e-06 55.8 69 44.9


User provided reference genes

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