Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aa31LG10G5370 Aethionema arabicum HOM05D004919 ORTHO05D005994 8.4e-149 530.4 281 100.0
AL1G55030 Arabidopsis lyrata HOM05D004919 ORTHO05D005994 2.5e-60 236.5 295 52.9
CARHR038020 Cardamine hirsuta HOM05D004919 ORTHO05D005994 6.8e-58 228.4 292 51.0
AT1G48405 Arabidopsis thaliana HOM05D004919 ORTHO05D005994 4.4e-57 225.7 292 51.0
Aa31LG8G4550 Aethionema arabicum HOM05D004919 ORTHO05D005994 9.8e-57 224.6 297 49.8
Carub.0001s3752 Capsella rubella HOM05D004919 ORTHO05D005994 2.2e-56 223.4 288 50.0
Carub.0003s1741 Capsella rubella HOM05D004919 ORTHO05D005994 1.4e-55 220.7 327 47.7
BraA05t22046Z Brassica rapa HOM05D004919 ORTHO05D005994 3.2e-55 219.5 308 47.7
CARHR093030 Cardamine hirsuta HOM05D004919 ORTHO05D005994 4.1e-55 219.2 307 49.2
AT3G17680 Arabidopsis thaliana HOM05D004919 ORTHO05D005994 1.2e-54 217.6 315 47.3
AL3G30800 Arabidopsis lyrata HOM05D004919 ORTHO05D005994 2.0e-54 216.9 308 47.7
Sp1g35340 Schrenkiella parvula HOM05D004919 ORTHO05D005994 2.0e-54 216.9 297 48.1
BcaB06g25823 Brassica carinata HOM05D004919 ORTHO05D005994 1.7e-53 213.8 308 46.8
Sp3g15820 Schrenkiella parvula HOM05D004919 ORTHO05D005994 2.3e-53 213.4 310 47.7
A08p04740 Brassica napus HOM05D004919 ORTHO05D005994 1.5e-52 210.7 292 49.0
Thhalv10021085m.g Eutrema salsugineum HOM05D004919 ORTHO05D005994 3.3e-52 209.5 318 45.9
BraA08t32503Z Brassica rapa HOM05D004919 ORTHO05D005994 4.3e-52 209.1 292 48.6
Thhalv10012064m.g Eutrema salsugineum HOM05D004919 ORTHO05D005994 7.3e-52 208.4 290 50.7
BcaB06g25821 Brassica carinata HOM05D004919 ORTHO05D005994 3.6e-51 206.1 305 46.6
A05p32170 Brassica napus HOM05D004919 ORTHO05D005994 1.8e-50 203.8 292 47.6
C08p05110 Brassica napus HOM05D004919 ORTHO05D005994 6.8e-50 201.8 296 47.0
C05p48710 Brassica napus HOM05D004919 ORTHO05D005994 2.0e-49 200.3 292 46.6
BolC5t33607H Brassica oleracea HOM05D004919 ORTHO05D005994 2.0e-49 200.3 292 46.6
BolC8t47321H Brassica oleracea HOM05D004919 ORTHO05D005994 2.6e-49 199.9 296 46.6
BcaC07g37137 Brassica carinata HOM05D004919 ORTHO05D005994 9.8e-49 198.0 296 46.6
AL1G55008 Arabidopsis lyrata HOM05D004919 ORTHO05D005994 1.7e-48 197.2 185 62.2
BcaB07g33762 Brassica carinata HOM05D004919 ORTHO05D005994 1.4e-47 194.1 250 50.0
BraA06t23655Z Brassica rapa HOM05D004919 ORTHO05D005994 5.4e-39 165.6 253 45.1
A06p04510 Brassica napus HOM05D004919 ORTHO05D005994 5.1e-37 159.1 253 44.3
BcaC01g03740 Brassica carinata HOM05D004919 ORTHO05D005994 6.8e-34 148.7 185 49.7
BcaB04g18959 Brassica carinata HOM05D004919 ORTHO05D005994 7.6e-33 145.2 118 62.7
C03p49080 Brassica napus HOM05D004919 ORTHO05D005994 7.3e-28 128.6 144 52.8
BolC3t17188H Brassica oleracea HOM05D004919 ORTHO05D005994 7.3e-28 128.6 144 52.8
BcaB04g17432 Brassica carinata HOM05D004919 ORTHO05D005994 1.5e-20 104.4 195 42.6
Hund22396 Selenicereus undatus HOM05D004919 ORTHO05D005994 2.9e-16 90.1 113 43.4
TAR622G0944 Trochodendron aralioides HOM05D004919 ORTHO05D005994 3.8e-16 89.7 116 44.8
EL10Ac8g19437 Beta vulgaris HOM05D004919 ORTHO05D005994 3.2e-15 86.7 113 43.4
BcaB04g17430 Brassica carinata HOM05D004919 ORTHO05D005994 3.2e-15 86.7 183 40.4
Atru.chr9.355 Acer truncatum HOM05D004919 ORTHO05D005994 7.1e-15 85.5 170 35.3
ClCG04G012590 Citrullus lanatus HOM05D004919 ORTHO05D005994 9.3e-15 85.1 149 38.3
Aqoxy3G04241 Aquilegia oxysepala HOM05D004919 ORTHO05D005994 1.6e-14 84.3 119 40.3
TWI60G1404 Tripterygium wilfordii HOM05D004919 ORTHO05D005994 1.6e-14 84.3 288 26.7
Potri.012G038000 Populus trichocarpa HOM05D004919 ORTHO05D005994 2.7e-14 83.6 195 34.4
TWI81G0707 Tripterygium wilfordii HOM05D004919 ORTHO05D005994 3.5e-14 83.2 149 34.9
FvH4_5g18280 Fragaria vesca HOM05D004919 ORTHO05D005994 4.6e-14 82.8 226 29.6
QL03p069496 Quercus lobata HOM05D004919 ORTHO05D005994 6.0e-14 82.4 156 37.2
Ca_00018_v3 Cicer arietinum L. HOM05D004919 ORTHO05D005994 7.9e-14 82.0 181 32.6
Ciclev10020883m.g Citrus clementina HOM05D004919 ORTHO05D005994 7.9e-14 82.0 115 37.4
PSO782G5234 Papaver somniferum HOM05D004919 ORTHO05D005994 1.0e-13 81.6 168 33.9
Oeu061193.1 Olea europaea HOM05D004919 ORTHO05D005994 1.3e-13 81.3 150 35.3
Prupe.5G242300 Prunus persica HOM05D004919 ORTHO05D005994 1.3e-13 81.3 121 38.0
SalBow8G2727 Salvia bowleyana HOM05D004919 ORTHO05D005994 1.3e-13 81.3 125 37.6
FAN08G0951 Fragaria x ananassa HOM05D004919 ORTHO05D005994 1.8e-13 80.9 221 29.4
Glyma.16G216300 Glycine max HOM05D004919 ORTHO05D005994 1.8e-13 80.9 215 32.1
CAN.G65.77 Capsicum annuum HOM05D004919 ORTHO05D005994 2.3e-13 80.5 152 34.9
Cfa017790 Carpinus fangiana HOM05D004919 ORTHO05D005994 2.3e-13 80.5 204 32.4
DCAR_010223 Daucus carota HOM05D004919 ORTHO05D005994 2.3e-13 80.5 119 38.7
Nitab4.5_0002049g0020 Nicotiana tabacum HOM05D004919 ORTHO05D005994 2.3e-13 80.5 105 41.9
PSO063G6227 Papaver somniferum HOM05D004919 ORTHO05D005994 2.3e-13 80.5 168 33.3
FAN18G2684 Fragaria x ananassa HOM05D004919 ORTHO05D005994 3.0e-13 80.1 226 29.2
FAN13G3100 Fragaria x ananassa HOM05D004919 ORTHO05D005994 3.9e-13 79.7 222 28.8
DCAR_013999 Daucus carota HOM05D004919 ORTHO05D005994 6.7e-13 79.0 165 34.5
Glyma.09G166300 Glycine max HOM05D004919 ORTHO05D005994 6.7e-13 79.0 163 33.1
Solyc06g072290.3 Solanum lycopersicum HOM05D004919 ORTHO05D005994 6.7e-13 79.0 164 34.8
Hma1.2p1_0983F.1_g244060 Hydrangea macrophylla HOM05D004919 ORTHO05D005994 8.7e-13 78.6 158 35.4
unitig_37.g12835 Utricularia gibba HOM05D004919 ORTHO05D005994 8.7e-13 78.6 125 39.2
arahy.Tifrunner.gnm1.ann1.SE8RA9 Arachis hypogaea HOM05D004919 ORTHO05D005994 1.1e-12 78.2 150 34.7
arahy.Tifrunner.gnm1.ann1.UCE8LX Arachis hypogaea HOM05D004919 ORTHO05D005994 1.1e-12 78.2 150 34.7
FAN04G2831 Fragaria x ananassa HOM05D004919 ORTHO05D005994 1.1e-12 78.2 221 29.0
PGSC0003DMG400027049 Solanum tuberosum HOM05D004919 ORTHO05D005994 1.1e-12 78.2 188 34.0
CiPaw.16G072100 Carya illinoinensis HOM05D004919 ORTHO05D005994 1.5e-12 77.8 189 34.4
AUR62034040 Chenopodium quinoa HOM05D004919 ORTHO05D005994 1.5e-12 77.8 192 30.7
Eucgr.K02309 Eucalyptus grandis HOM05D004919 ORTHO05D005994 1.5e-12 77.8 195 31.3
Sopen06g028660 Solanum pennellii HOM05D004919 ORTHO05D005994 1.5e-12 77.8 184 33.7
SGA_v2.0_scaffold335G49119 Striga asiatica HOM05D004919 ORTHO05D003750 1.5e-12 77.8 119 39.5
Haze_18425 Corylus avellana HOM05D004919 ORTHO05D005994 1.9e-12 77.4 203 33.0
CsaV3_1G005110 Cucumis sativus L. HOM05D004919 ORTHO05D005994 1.9e-12 77.4 191 31.9
arahy.Tifrunner.gnm1.ann1.C1QDUR Arachis hypogaea HOM05D004919 ORTHO05D005994 2.5e-12 77.0 150 34.7
CAN.G1909.1 Capsicum annuum HOM05D004919 ORTHO05D005994 2.5e-12 77.0 164 32.9
Lalb_Chr22g0353861 Lupinus albus HOM05D004919 ORTHO05D005994 2.5e-12 77.0 222 28.8
arahy.Tifrunner.gnm1.ann1.03EXEF Arachis hypogaea HOM05D004919 ORTHO05D005994 3.3e-12 76.6 150 34.7
Lj2g0012075 Lotus japonicus HOM05D004919 ORTHO05D005994 3.3e-12 76.6 175 32.0
Peaxi162Scf00171g00315 Petunia axillaris HOM05D004919 ORTHO05D005994 3.3e-12 76.6 162 34.0
Potri.015G030100 Populus trichocarpa HOM05D004919 ORTHO05D005994 3.3e-12 76.6 204 33.8
Lj5P166T67 Lonicera japonica HOM05D004919 ORTHO05D005994 4.3e-12 76.3 208 31.7
Nitab4.5_0000782g0200 Nicotiana tabacum HOM05D004919 ORTHO05D005994 4.3e-12 76.3 151 35.1
Nitab4.5_0004612g0040 Nicotiana tabacum HOM05D004919 ORTHO05D005994 4.3e-12 76.3 162 34.0
Sabra12G0026400 Salix brachista HOM05D004919 ORTHO05D005994 4.3e-12 76.3 128 38.3
Solyc03g098450.3 Solanum lycopersicum HOM05D004919 ORTHO05D005994 4.3e-12 76.3 164 32.9
Sopen03g029190 Solanum pennellii HOM05D004919 ORTHO05D005994 4.3e-12 76.3 164 32.9
VMungo0464G0748 Vigna mungo HOM05D004919 ORTHO05D005994 4.3e-12 76.3 217 29.0
MSTRG.4322 Avicennia marina HOM05D004919 ORTHO05D005994 5.6e-12 75.9 207 31.4
AUR62033077 Chenopodium quinoa HOM05D004919 ORTHO05D005994 5.6e-12 75.9 190 29.5
Migut.D02060 Erythranthe guttata HOM05D004919 ORTHO05D005994 5.6e-12 75.9 163 35.0
Nn4g24904 Nelumbo nucifera HOM05D004919 ORTHO05D005994 5.6e-12 75.9 113 39.8
ATR0618G253 Amborella trichopoda HOM05D004919 ORTHO05D005994 7.4e-12 75.5 226 25.7
TPR.G24055 Trifolium pratense HOM05D004919 ORTHO05D005994 7.4e-12 75.5 173 33.5
Lalb_Chr24g0398491 Lupinus albus HOM05D004919 ORTHO05D005994 9.6e-12 75.1 205 28.8
MSTRG.9710 Avicennia marina HOM05D004919 ORTHO05D005994 1.3e-11 74.7 127 36.2
RcHm_v2.0_Chr7g0177301 Rosa chinensis HOM05D004919 ORTHO05D005994 1.3e-11 74.7 224 28.1
MELO3C001949.2 Cucumis melo HOM05D004919 ORTHO05D005994 1.6e-11 74.3 205 31.2
DCAR_023254 Daucus carota HOM05D004919 ORTHO05D005994 2.1e-11 73.9 188 31.4
MD06G1238400 Malus domestica HOM05D004919 ORTHO05D005994 2.8e-11 73.6 213 30.0
Phvul.004G141900 Phaseolus vulgaris HOM05D004919 ORTHO05D005994 2.8e-11 73.6 194 29.9
PGR083G2189 Punica granatum HOM05D004919 ORTHO05D005994 2.8e-11 73.6 210 30.5
PGSC0003DMG400010158 Solanum tuberosum HOM05D004919 ORTHO05D005994 2.8e-11 73.6 170 31.2
Dinv06632 Davidia involucrata HOM05D004919 ORTHO05D005994 3.7e-11 73.2 117 38.5
MD14G1244700 Malus domestica HOM05D004919 ORTHO05D005994 4.8e-11 72.8 121 33.1
Medtr6g081040 Medicago truncatula HOM05D004919 ORTHO05D005994 4.8e-11 72.8 289 27.0
Lj1g0019516 Lotus japonicus HOM05D004919 ORTHO05D005994 6.2e-11 72.4 182 30.8
PGR044G0656 Punica granatum HOM05D004919 ORTHO05D005994 6.2e-11 72.4 129 33.3
Sabra15G0025100 Salix brachista HOM05D004919 ORTHO05D005994 6.2e-11 72.4 207 33.8
BcaB04g17431 Brassica carinata HOM05D004919 ORTHO05D005994 8.1e-11 72.0 86 52.3
Oeu038486.1 Olea europaea HOM05D004919 ORTHO05D005994 8.1e-11 72.0 160 33.1
unitig_0.g27 Utricularia gibba HOM05D004919 ORTHO05D005994 1.1e-10 71.6 100 39.0
Manes.02G214000 Manihot esculenta HOM05D004919 ORTHO05D005994 1.8e-10 70.9 246 27.2
Cc00_g18770 Coffea canephora HOM05D004919 ORTHO05D005994 2.4e-10 70.5 174 31.0
Peaxi162Scf00643g00061 Petunia axillaris HOM05D004919 ORTHO05D005994 2.4e-10 70.5 161 32.9
Psat1g120680 Pisum sativum HOM05D004919 ORTHO05D005994 4.0e-10 69.7 293 24.6
MBI03_g05108_MAGBIO Magnolia biondii HOM05D004919 ORTHO05D005994 6.9e-10 68.9 184 28.8
Sed0023393 Sechium edule HOM05D004919 ORTHO05D005994 6.9e-10 68.9 171 32.2
C06p02850 Brassica napus HOM05D004919 ORTHO05D005994 1.2e-09 68.2 151 35.8
C06p02890 Brassica napus HOM05D004919 ORTHO05D005994 1.2e-09 68.2 151 35.8
C06p02940 Brassica napus HOM05D004919 ORTHO05D005994 1.2e-09 68.2 151 35.8
CANSAT01G3029 Cannabis sativa HOM05D004919 ORTHO05D005994 1.2e-09 68.2 159 30.8
Oeu023547.1 Olea europaea HOM05D004919 ORTHO05D005994 5.8e-09 65.9 225 28.4
CDE05G3589 Ceratophyllum demersum HOM05D004919 ORTHO05D005994 7.6e-09 65.5 173 30.1
HPP92_008286 Vanilla planifolia HOM05D004919 ORTHO05D005994 1.7e-08 64.3 279 27.2
Actinidia34660 Actinidia chinensis HOM05D004919 ORTHO05D005994 8.4e-08 62.0 184 29.9
CDE05G0351 Ceratophyllum demersum HOM05D004919 ORTHO05D005994 8.4e-08 62.0 173 29.5
Lj9C413T11 Lonicera japonica HOM05D004919 ORTHO05D005994 6.0e-06 55.8 129 31.8


User provided reference genes

Program Settings