Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aa31LG10G4830 Aethionema arabicum HOM05D003701 ORTHO05D004771 2.7e-250 868.2 447 100.0
Sp1g35740 Schrenkiella parvula HOM05D003701 ORTHO05D004771 2.5e-216 755.4 448 85.9
BcaB04g17381 Brassica carinata HOM05D003701 ORTHO05D004771 1.6e-215 752.7 448 85.7
A08p04400 Brassica napus HOM05D003701 ORTHO05D004771 2.8e-215 751.9 448 85.5
BolC8t47272H Brassica oleracea HOM05D003701 ORTHO05D004771 4.8e-215 751.1 448 85.5
C08p04710 Brassica napus HOM05D003701 ORTHO05D004771 6.3e-215 750.7 448 85.5
BraA08t32466Z Brassica rapa HOM05D003701 ORTHO05D004771 6.3e-215 750.7 448 85.3
BcaC07g37102 Brassica carinata HOM05D003701 ORTHO05D004771 8.2e-215 750.4 448 85.5
BcaC05g27549 Brassica carinata HOM05D003701 ORTHO05D004771 1.4e-214 749.6 448 85.0
C05p35350 Brassica napus HOM05D003701 ORTHO05D004771 1.4e-214 749.6 448 85.0
BolC5t32248H Brassica oleracea HOM05D003701 ORTHO05D004771 3.1e-214 748.4 448 84.8
CARHR038850 Cardamine hirsuta HOM05D003701 ORTHO05D004771 4.1e-214 748.0 446 86.1
A05p20860 Brassica napus HOM05D003701 ORTHO05D004771 2.0e-213 745.7 448 84.6
BraA05t20991Z Brassica rapa HOM05D003701 ORTHO05D004771 2.0e-213 745.7 448 84.6
Carub.0001s3800 Capsella rubella HOM05D003701 ORTHO05D004771 3.4e-213 745.0 447 85.5
BcaB02g11304 Brassica carinata HOM05D003701 ORTHO05D004771 2.9e-212 741.9 448 84.2
Thhalv10011486m.g Eutrema salsugineum HOM05D003701 ORTHO05D004771 2.9e-212 741.9 448 84.2
AL1G55580 Arabidopsis lyrata HOM05D003701 ORTHO05D004771 1.1e-211 740.0 447 84.6
AT1G48850 Arabidopsis thaliana HOM05D003701 ORTHO05D004771 9.4e-211 736.9 446 84.5
THA.LOC104827296 Tarenaya hassleriana HOM05D003701 ORTHO05D004771 1.8e-209 732.6 447 83.2
Gohir.A10G206500 Gossypium hirsutum HOM05D003701 ORTHO05D004771 7.9e-202 707.2 437 80.8
Gohir.D10G214600 Gossypium hirsutum HOM05D003701 ORTHO05D004771 3.9e-201 704.9 437 80.8
Duzib106G0278 Durio zibethinus HOM05D003701 ORTHO05D004771 1.3e-199 699.9 430 81.4
Potri.010G221600 Populus trichocarpa HOM05D003701 ORTHO05D004771 7.0e-198 694.1 429 81.4
Atru.chr12.740 Acer truncatum HOM05D003701 ORTHO05D004771 9.1e-198 693.7 431 80.3
Gohir.A05G297100 Gossypium hirsutum HOM05D003701 ORTHO05D004771 4.5e-197 691.4 438 79.2
Thecc.10G072600 Theobroma cacao HOM05D003701 ORTHO05D004771 1.3e-196 689.9 438 78.5
Gohir.D05G297000 Gossypium hirsutum HOM05D003701 ORTHO05D004771 6.5e-196 687.6 438 79.0
Gorai.009G314200 Gossypium raimondii HOM05D003701 ORTHO05D004771 6.5e-196 687.6 438 79.0
Manes.10G045200 Manihot esculenta HOM05D003701 ORTHO05D004771 1.1e-195 686.8 434 80.0
arahy.Tifrunner.gnm1.ann1.X76XU5 Arachis hypogaea HOM05D003701 ORTHO05D004771 1.5e-192 676.4 430 79.3
TWI74G0111 Tripterygium wilfordii HOM05D003701 ORTHO05D004771 1.5e-192 676.4 431 79.1
TWI74G0263 Tripterygium wilfordii HOM05D003701 ORTHO05D004771 1.5e-192 676.4 431 79.1
Glyma.10G211400 Glycine max HOM05D003701 ORTHO05D004771 2.0e-192 676.0 430 78.1
arahy.Tifrunner.gnm1.ann1.V7IKH4 Arachis hypogaea HOM05D003701 ORTHO05D004771 2.6e-192 675.6 430 78.6
Ciclev10031547m.g Citrus clementina HOM05D003701 ORTHO05D004771 4.4e-192 674.9 432 79.4
Phvul.007G094200 Phaseolus vulgaris HOM05D003701 ORTHO05D004771 7.4e-192 674.1 440 77.3
Gorai.011G240200 Gossypium raimondii HOM05D003701 ORTHO05D004771 1.7e-191 672.9 385 85.7
Potri.008G040700 Populus trichocarpa HOM05D003701 ORTHO05D004771 2.8e-191 672.2 429 78.8
Sabra08G0027700 Salix brachista HOM05D003701 ORTHO05D004771 1.1e-190 670.2 434 78.1
VMungo0720G1162 Vigna mungo HOM05D003701 ORTHO05D004771 1.8e-190 669.5 430 78.1
Gorai.011G240100 Gossypium raimondii HOM05D003701 ORTHO05D004771 3.1e-190 668.7 438 76.9
Dinv11780 Davidia involucrata HOM05D003701 ORTHO05D004771 7.0e-190 667.5 432 78.2
Lalb_Chr02g0142141 Lupinus albus HOM05D003701 ORTHO05D004771 1.2e-189 666.8 418 78.0
Glyma.20G179500 Glycine max HOM05D003701 ORTHO05D004771 7.7e-189 664.1 430 77.0
Lalb_Chr06g0162271 Lupinus albus HOM05D003701 ORTHO05D004771 1.7e-188 662.9 418 80.4
Ca_10573_v3 Cicer arietinum L. HOM05D003701 ORTHO05D004771 2.9e-188 662.1 432 77.1
Ca_29596_v3 Cicer arietinum L. HOM05D003701 ORTHO05D004771 2.9e-188 662.1 432 77.1
GSVIVG01016288001 Vitis vinifera HOM05D003701 ORTHO05D004771 5.0e-188 661.4 431 78.0
CSS0025729 Camellia sinensis var. sinensis HOM05D003701 ORTHO05D004771 8.5e-188 660.6 432 77.8
Gohir.A10G206400 Gossypium hirsutum HOM05D003701 ORTHO05D004771 8.5e-188 660.6 438 75.6
Hund12041 Selenicereus undatus HOM05D003701 ORTHO05D004771 8.5e-188 660.6 434 77.4
TPR.G1904 Trifolium pratense HOM05D003701 ORTHO05D004771 1.1e-187 660.2 432 77.1
DCAR_015315 Daucus carota HOM05D003701 ORTHO05D004771 1.9e-187 659.4 437 77.3
Sabra10G0171500 Salix brachista HOM05D003701 ORTHO05D004771 1.9e-187 659.4 478 71.8
Medtr1g095250 Medicago truncatula HOM05D003701 ORTHO05D004771 3.2e-187 658.7 440 75.7
TAR623G1268 Trochodendron aralioides HOM05D003701 ORTHO05D004771 4.2e-187 658.3 432 77.1
TAR633G1876 Trochodendron aralioides HOM05D003701 ORTHO05D004771 4.2e-187 658.3 431 76.6
Eucgr.G02824 Eucalyptus grandis HOM05D003701 ORTHO05D004771 7.2e-187 657.5 435 77.5
Solyc04g049350.4 Solanum lycopersicum HOM05D003701 ORTHO05D004771 9.4e-187 657.1 439 75.2
Sopen04g019270 Solanum pennellii HOM05D003701 ORTHO05D004771 2.1e-186 656.0 438 74.9
Sc06g0004590 Simmondsia chinensis HOM05D003701 ORTHO05D004771 4.7e-186 654.8 431 77.7
Lj5g0008768 Lotus japonicus HOM05D003701 ORTHO05D004771 6.1e-186 654.4 446 75.1
RcHm_v2.0_Chr1g0363491 Rosa chinensis HOM05D003701 ORTHO05D004771 6.1e-186 654.4 431 76.3
FAN03G0046 Fragaria x ananassa HOM05D003701 ORTHO05D004771 8.0e-186 654.1 434 75.6
arahy.Tifrunner.gnm1.ann1.6FL4NC Arachis hypogaea HOM05D003701 ORTHO05D004771 1.0e-185 653.7 430 77.0
Cpa.g.sc53.71 Carica papaya HOM05D003701 ORTHO05D004771 1.0e-185 653.7 455 74.1
PSO063G5795 Papaver somniferum HOM05D003701 ORTHO05D004771 1.0e-185 653.7 418 78.2
CANSAT56G3258 Cannabis sativa HOM05D003701 ORTHO05D004771 3.0e-185 652.1 448 74.8
PGSC0003DMG400024392 Solanum tuberosum HOM05D003701 ORTHO05D004771 4.0e-185 651.7 443 74.3
FAN10G2919 Fragaria x ananassa HOM05D003701 ORTHO05D004771 5.2e-185 651.4 434 75.1
CiPaw.02G174300 Carya illinoinensis HOM05D003701 ORTHO05D004771 8.8e-185 650.6 431 77.3
Sc09g0006470 Simmondsia chinensis HOM05D003701 ORTHO05D004771 1.5e-184 649.8 432 76.6
MSTRG.8153 Avicennia marina HOM05D003701 ORTHO05D004771 2.0e-184 649.4 439 75.4
PSO339G3023 Papaver somniferum HOM05D003701 ORTHO05D004771 2.0e-184 649.4 430 76.3
FvH4_7g19670 Fragaria vesca HOM05D003701 ORTHO05D004771 2.6e-184 649.0 434 75.1
QL08p056106 Quercus lobata HOM05D003701 ORTHO05D004771 3.3e-184 648.7 429 77.4
FAN06G0474 Fragaria x ananassa HOM05D003701 ORTHO05D004771 5.7e-184 647.9 429 75.5
Nitab4.5_0005490g0010 Nicotiana tabacum HOM05D003701 ORTHO05D004771 1.3e-183 646.7 444 74.5
CAN.G186.45 Capsicum annuum HOM05D003701 ORTHO05D004771 1.7e-183 646.4 436 75.7
HanXRQChr09g0249701 Helianthus annuus HOM05D003701 ORTHO05D004771 1.7e-183 646.4 434 76.3
Ah.06g192010 Amaranthus hybridus HOM05D003701 ORTHO05D004771 2.8e-183 645.6 431 76.3
SGA_v2.0_scaffold51G18675 Striga asiatica HOM05D003701 ORTHO05D004771 2.8e-183 645.6 440 75.5
ClCG08G007450 Citrullus lanatus HOM05D003701 ORTHO05D004771 3.7e-183 645.2 441 74.1
Peaxi162Scf00747g00122 Petunia axillaris HOM05D003701 ORTHO05D004771 3.7e-183 645.2 400 79.0
HanXRQChr15g0496661 Helianthus annuus HOM05D003701 ORTHO05D004771 1.1e-182 643.7 435 76.3
Migut.F01774 Erythranthe guttata HOM05D003701 ORTHO05D004771 1.4e-182 643.3 439 74.5
MSTRG.367 Avicennia marina HOM05D003701 ORTHO05D004771 1.8e-182 642.9 439 74.5
MELO3C019790.2 Cucumis melo HOM05D003701 ORTHO05D004771 2.4e-182 642.5 431 74.5
MD01G1108900 Malus domestica HOM05D003701 ORTHO05D004771 5.3e-182 641.3 428 75.5
PGSC0003DMG400016016 Solanum tuberosum HOM05D003701 ORTHO05D004771 9.1e-182 640.6 439 73.6
CsaV3_6G036360 Cucumis sativus L. HOM05D003701 ORTHO05D004771 1.2e-181 640.2 431 74.0
Aqoxy1G01249 Aquilegia oxysepala HOM05D003701 ORTHO05D004771 2.0e-181 639.4 430 75.3
ECA232G2521 Erigeron canadensis HOM05D003701 ORTHO05D004771 5.9e-181 637.9 437 75.3
Lsat_1_v5_gn_2_114381 Lactuca sativa HOM05D003701 ORTHO05D004771 7.7e-181 637.5 434 75.1
MD07G1175200 Malus domestica HOM05D003701 ORTHO05D004771 1.3e-180 636.7 440 73.0
Sopen04g004770 Solanum pennellii HOM05D003701 ORTHO05D004771 2.9e-180 635.6 435 73.1
Actinidia38848 Actinidia chinensis HOM05D003701 ORTHO05D004771 3.8e-180 635.2 432 75.0
ATR0115G006 Amborella trichopoda HOM05D003701 ORTHO05D004771 3.8e-180 635.2 444 73.9
Nn2g13085 Nelumbo nucifera HOM05D003701 ORTHO05D004771 3.8e-180 635.2 442 74.0
Solyc04g009620.4 Solanum lycopersicum HOM05D003701 ORTHO05D004771 3.8e-180 635.2 435 73.8
MBI10_g04889_MAGBIO Magnolia biondii HOM05D003701 ORTHO05D004771 6.5e-180 634.4 448 73.0
Sed0016616 Sechium edule HOM05D003701 ORTHO05D004771 6.5e-180 634.4 440 72.5
AUR62041045 Chenopodium quinoa HOM05D003701 ORTHO05D004771 1.5e-179 633.3 431 74.9
Hma1.2p1_1004F.1_g246800 Hydrangea macrophylla HOM05D003701 ORTHO05D004771 1.9e-179 632.9 431 74.9
EL10Ac2g03249 Beta vulgaris HOM05D003701 ORTHO05D004771 4.2e-179 631.7 433 74.8
FAN01G1080 Fragaria x ananassa HOM05D003701 ORTHO05D004771 4.2e-179 631.7 473 69.6
MBI02_g43493_MAGBIO Magnolia biondii HOM05D003701 ORTHO05D004771 2.1e-178 629.4 430 74.4
CDE04G2332 Ceratophyllum demersum HOM05D003701 ORTHO05D004771 2.7e-178 629.0 434 73.5
AUR62037661 Chenopodium quinoa HOM05D003701 ORTHO05D004771 2.7e-178 629.0 451 72.1
Lj1A914T43 Lonicera japonica HOM05D003701 ORTHO05D004771 1.0e-177 627.1 432 75.0
Nitab4.5_0001029g0070 Nicotiana tabacum HOM05D003701 ORTHO05D004771 2.3e-177 625.9 472 69.7
PGR142G1908 Punica granatum HOM05D003701 ORTHO05D004771 5.2e-177 624.8 430 74.7
Duzib114G1041 Durio zibethinus HOM05D003701 ORTHO05D004771 6.8e-177 624.4 442 72.4
FAN10G2344 Fragaria x ananassa HOM05D003701 ORTHO05D004771 6.3e-175 617.8 434 72.6
DCAR_012659 Daucus carota HOM05D003701 ORTHO05D004771 1.4e-174 616.7 388 77.6
Gohir.D05G297025 Gossypium hirsutum HOM05D003701 ORTHO05D004771 2.4e-174 615.9 433 73.7
Actinidia03057 Actinidia chinensis HOM05D003701 ORTHO05D004771 1.6e-173 613.2 431 72.2
Rhsim09G0152400 Rhododendron simsii HOM05D003701 ORTHO05D004771 5.5e-171 604.7 513 63.5
vmacro04876 Vaccinium macrocarpon HOM05D003701 ORTHO05D004771 5.5e-171 604.7 549 60.1
HPP92_012666 Vanilla planifolia HOM05D003701 ORTHO05D004771 1.2e-170 603.6 415 73.3
Migut.F01773 Erythranthe guttata HOM05D003701 ORTHO05D004771 1.6e-170 603.2 384 77.1
unitig_899.g14441 Utricularia gibba HOM05D003701 ORTHO05D004771 2.8e-170 602.4 430 72.6
Os03g0254800 Oryza sativa ssp. japonica HOM05D003701 ORTHO05D004771 8.0e-170 600.9 398 73.9
SEGI_31492 Sequoiadendron giganteum HOM05D003701 ORTHO05D004771 1.8e-169 599.7 397 76.3
CSS0011231 Camellia sinensis var. sinensis HOM05D003701 ORTHO05D004771 1.2e-168 597.0 431 70.8
SalBow4G1339 Salvia bowleyana HOM05D003701 ORTHO05D004771 1.2e-165 587.0 434 70.0
GSVIVG01025176001 Vitis vinifera HOM05D003701 ORTHO05D004771 3.5e-165 585.5 384 74.5
Mapoly0007s0052 Marchantia polymorpha HOM05D003701 ORTHO05D004771 7.8e-165 584.3 413 70.9
AagrBONN_evm.TU.Sc2ySwM_369.393 Anthoceros agrestis HOM05D003701 ORTHO05D004771 1.3e-164 583.6 382 76.2
CAN.G186.44 Capsicum annuum HOM05D003701 ORTHO05D004771 1.7e-164 583.2 390 72.1
arahy.Tifrunner.gnm1.ann1.914CGH Arachis hypogaea HOM05D003701 ORTHO05D004771 3.8e-164 582.0 342 81.6
SMO146G0105 Selaginella moellendorffii HOM05D003701 ORTHO05D004771 6.6e-164 581.3 440 68.2
Psat6g184400 Pisum sativum HOM05D003701 ORTHO05D004771 8.6e-156 554.3 365 76.7
CiPaw.01G273500 Carya illinoinensis HOM05D003701 ORTHO05D004771 1.2e-154 550.4 337 81.0
Prupe.2G214400 Prunus persica HOM05D003701 ORTHO05D004771 1.4e-153 547.0 365 75.9
Oeu027479.1 Olea europaea HOM05D003701 ORTHO05D004771 4.9e-151 538.5 352 77.6
CANSAT78G2428 Cannabis sativa HOM05D003701 ORTHO05D004771 4.1e-150 535.4 391 68.3
Oeu007390.4 Olea europaea HOM05D003701 ORTHO05D004771 3.5e-149 532.3 344 77.6
Dinv31329 Davidia involucrata HOM05D003701 ORTHO05D004771 1.8e-145 520.0 337 78.0
Zm00001eb011020 Zea mays HOM05D003701 ORTHO05D004771 1.5e-144 516.9 329 77.2
MCO05G587 Micromonas commoda HOM05D003701 ORTHO05D004771 3.4e-144 515.8 373 69.7
Cre03.g145747 Chlamydomonas reinhardtii HOM05D003701 ORTHO05D004771 4.6e-141 505.4 379 68.3
PRCOL_00001179 Prasinoderma coloniale HOM05D003701 ORTHO05D004771 6.6e-140 501.5 366 71.3
unitig_736.g22517 Utricularia gibba HOM05D003701 ORTHO05D004771 2.5e-139 499.6 430 63.0
Eucgr.J01090 Eucalyptus grandis HOM05D003701 ORTHO05D004771 2.4e-137 493.0 345 73.0
CDE07G1562 Ceratophyllum demersum HOM05D003701 ORTHO05D004771 4.0e-137 492.3 434 61.5
COL.COLO4_23690 Corchorus olitorius HOM05D003701 ORTHO05D004771 1.1e-126 457.6 261 84.3
Zm00001eb398410 Zea mays HOM05D003701 ORTHO05D004771 2.9e-119 433.0 330 65.5
COL.COLO4_23691 Corchorus olitorius HOM05D003701 ORTHO05D004771 1.5e-115 420.6 265 80.8
Pp3c1_35940 Physcomitrium patens HOM05D003701 ORTHO05D004771 1.6e-114 417.2 279 73.8
CBR_g41627 Chara braunii HOM05D003701 ORTHO05D004771 2.2e-111 406.8 385 57.1
Haze_16899 Corylus avellana HOM05D003701 ORTHO05D004771 1.3e-98 364.4 230 80.4
Gohir.D10G214532 Gossypium hirsutum HOM05D003701 ORTHO05D004771 7.2e-94 348.6 245 70.6
Gohir.D10G214466 Gossypium hirsutum HOM05D003701 ORTHO05D004771 4.4e-83 312.8 189 83.6
Cc09_g02040 Coffea canephora HOM05D003701 ORTHO05D004771 1.5e-80 304.3 190 80.0
Cc09_g02030 Coffea canephora HOM05D003701 ORTHO05D004771 1.3e-79 301.2 233 67.8
Haze_27259 Corylus avellana HOM05D003701 ORTHO05D004771 4.2e-78 296.2 365 44.7
Cfa022484 Carpinus fangiana HOM05D003701 ORTHO05D004771 9.4e-78 295.0 355 49.0
SHI12194 Sapria himalayana HOM05D003666 ORTHO05D004770 6.1e-69 265.8 157 78.3
RcHm_v2.0_Chr4g0427911 Rosa chinensis HOM05D003701 ORTHO05D004771 8.0e-61 238.8 220 63.2
MSTRG.366 Avicennia marina HOM05D003701 ORTHO05D004771 6.8e-60 235.7 146 78.1
FAN12G0728 Fragaria x ananassa HOM05D003701 ORTHO05D004771 7.0e-57 225.7 244 54.9
TAR636G0034 Trochodendron aralioides HOM05D003701 ORTHO05D004771 5.9e-56 222.6 224 53.6
TAR636G0416 Trochodendron aralioides HOM05D003701 ORTHO05D004771 5.9e-56 222.6 224 53.6
Glyma.14G185633 Glycine max HOM05D003701 ORTHO05D004771 3.5e-40 170.2 99 82.8
MD01G1109200 Malus domestica HOM05D003701 ORTHO05D004771 1.6e-37 161.4 145 58.6
SMO173G0015 Selaginella moellendorffii HOM05D003701 ORTHO05D004771 1.2e-32 145.2 220 45.9
QL07p006097 Quercus lobata HOM05D003701 ORTHO05D030296 4.9e-26 123.2 82 74.4
FAN17G1952 Fragaria x ananassa HOM05D003701 ORTHO05D004771 2.7e-24 117.5 297 34.7
VMungo0647G0194 Vigna mungo HOM05D003701 ORTHO05D432816 1.2e-21 108.6 89 66.3
Oeu052763.1 Olea europaea HOM05D003701 ORTHO05D030296 1.6e-21 108.2 60 86.7
QL07p006183 Quercus lobata HOM05D003701 ORTHO05D030296 7.6e-19 99.4 59 83.1
QL09p045974 Quercus lobata HOM05D003701 ORTHO05D030296 7.6e-19 99.4 59 83.1
FAN12G0587 Fragaria x ananassa HOM05D003701 ORTHO05D004771 1.7e-18 98.2 90 56.7
FAN01G1877 Fragaria x ananassa HOM05D003701 ORTHO05D208017 3.0e-15 87.4 78 60.3
Medtr0368s0020 Medicago truncatula HOM05D003701 ORTHO05D026922 1.6e-13 81.6 49 77.6
Glyma.14G185666 Glycine max HOM05D003701 ORTHO05D026922 8.1e-13 79.3 47 83.0
Oeu043945.1 Olea europaea HOM05D003701 ORTHO05D004771 6.9e-12 76.3 44 79.5
AL1G55650 Arabidopsis lyrata HOM05D003566 ORTHO05D005288 2.7e-08 64.3 59 69.5
C02p38530 Brassica napus HOM05D003701 ORTHO05D101262 1.3e-07 62.0 79 44.3
CBR_g74262 Chara braunii HOM05D003701 ORTHO05D004771 2.3e-07 61.2 43 69.8
BolC2t09870H Brassica oleracea HOM05D003701 ORTHO05D041413 3.0e-07 60.8 79 45.6
C05p40290 Brassica napus HOM05D003701 ORTHO05D041413 3.9e-07 60.5 79 45.6


User provided reference genes

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