Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aa31LG10G410 Aethionema arabicum HOM05D011788 ORTHO05D014339 3.3e-74 281.6 136 100.0
Thhalv10011398m.g Eutrema salsugineum HOM05D001067 ORTHO05D000876 2.1e-36 156.0 145 57.2
AL1G63890 Arabidopsis lyrata HOM05D011788 ORTHO05D014339 1.8e-35 152.9 134 61.2
AT1G55775 Arabidopsis thaliana HOM05D011788 ORTHO05D014339 1.8e-35 152.9 132 62.1
THA.LOC104815685 Tarenaya hassleriana HOM05D011788 ORTHO05D000687 1.8e-35 152.9 137 61.3
Carub.0001s4434 Capsella rubella HOM05D011788 ORTHO05D014339 4.3e-34 148.3 138 56.5
CARHR045460 Cardamine hirsuta HOM05D011788 ORTHO05D014339 1.3e-33 146.7 139 54.0
CARHR045490 Cardamine hirsuta HOM05D011788 ORTHO05D014339 9.0e-32 140.6 143 55.2
C03p93210 Brassica napus HOM05D011788 ORTHO05D014339 5.8e-31 137.9 146 52.7
BolC3t21619H Brassica oleracea HOM05D011788 ORTHO05D014339 6.5e-30 134.4 138 55.1
Sp1g41360 Schrenkiella parvula HOM05D001067 ORTHO05D000876 1.1e-29 133.7 136 55.1
A08p00300 Brassica napus HOM05D001067 ORTHO05D000876 6.7e-27 124.4 130 52.3
BcaC01g01566 Brassica carinata HOM05D011788 ORTHO05D014339 8.7e-27 124.0 111 59.5
BraA05t20628Z Brassica rapa HOM05D011788 ORTHO05D014339 1.6e-25 119.8 143 52.4
C06p16230 Brassica napus HOM05D011788 ORTHO05D014339 6.3e-25 117.9 143 50.3
BolC6t36820H Brassica oleracea HOM05D011788 ORTHO05D014339 6.3e-25 117.9 143 50.3
BcaB02g10799 Brassica carinata HOM05D011788 ORTHO05D014339 9.0e-24 114.0 144 49.3
BcaC08g44218 Brassica carinata HOM05D011788 ORTHO05D014339 1.2e-23 113.6 142 49.3
Sabra16G0317700 Salix brachista HOM05D000913 ORTHO05D000687 1.4e-08 63.5 60 55.0
CiPaw.16G094600 Carya illinoinensis HOM05D000913 ORTHO05D000687 9.1e-08 60.8 118 36.4
Haze_09880 Corylus avellana HOM05D000913 ORTHO05D000687 9.1e-08 60.8 60 58.3
FAN16G2023 Fragaria x ananassa HOM05D000913 ORTHO05D000687 1.2e-07 60.5 72 45.8
MBI16_g31488_MAGBIO Magnolia biondii HOM05D000913 ORTHO05D000687 1.2e-07 60.5 61 47.5
FvH4_3g42110 Fragaria vesca HOM05D000913 ORTHO05D000687 1.5e-07 60.1 134 38.1
MBI14_g43020_MAGBIO Magnolia biondii HOM05D000913 ORTHO05D000687 1.5e-07 60.1 58 53.4
arahy.Tifrunner.gnm1.ann1.IGM1GX Arachis hypogaea HOM05D000913 ORTHO05D000687 2.6e-07 59.3 63 47.6
BcaC05g30196 Brassica carinata HOM05D014993 ORTHO05D000687 2.6e-07 59.3 59 52.5
C05p62790 Brassica napus HOM05D014993 ORTHO05D000687 2.6e-07 59.3 59 52.5
BolC5t34932H Brassica oleracea HOM05D014993 ORTHO05D000687 2.6e-07 59.3 59 52.5
Haze_09888 Corylus avellana HOM05D000913 ORTHO05D000687 2.6e-07 59.3 67 50.7
QL08p005455 Quercus lobata HOM05D000913 ORTHO05D000687 2.6e-07 59.3 66 50.0
Hma1.2p1_0048F.1_g028140 Hydrangea macrophylla HOM05D000913 ORTHO05D000687 3.4e-07 58.9 61 50.8
FAN21G3003 Fragaria x ananassa HOM05D000913 ORTHO05D000687 4.5e-07 58.5 72 44.4
TAR629G0096 Trochodendron aralioides HOM05D000913 ORTHO05D000687 4.5e-07 58.5 58 53.4
CSS0028038 Camellia sinensis var. sinensis HOM05D000913 ORTHO05D000687 5.9e-07 58.2 62 45.2
Potri.001G468500 Populus trichocarpa HOM05D000913 ORTHO05D000687 5.9e-07 58.2 57 50.9
TAR629G2544 Trochodendron aralioides HOM05D000913 ORTHO05D000687 5.9e-07 58.2 59 54.2
MBI14_g42478_MAGBIO Magnolia biondii HOM05D000913 ORTHO05D000687 7.7e-07 57.8 58 50.0
Nn1g06060 Nelumbo nucifera HOM05D000913 ORTHO05D000687 7.7e-07 57.8 62 51.6
FAN21G2856 Fragaria x ananassa HOM05D000913 ORTHO05D000687 1.3e-06 57.0 136 38.2
Glyma.15G122200 Glycine max HOM05D000913 ORTHO05D000687 1.3e-06 57.0 57 49.1
arahy.Tifrunner.gnm1.ann1.RGK4QC Arachis hypogaea HOM05D000913 ORTHO05D000687 1.7e-06 56.6 63 46.0
CANSAT56G3334 Cannabis sativa HOM05D000913 ORTHO05D000687 1.7e-06 56.6 57 56.1
QL05p005810 Quercus lobata HOM05D000913 ORTHO05D000687 1.7e-06 56.6 57 54.4
CiPaw.11G208300 Carya illinoinensis HOM05D000913 ORTHO05D000687 2.2e-06 56.2 62 54.8
FAN25G2144 Fragaria x ananassa HOM05D000913 ORTHO05D000687 2.2e-06 56.2 135 37.8
Gohir.A04G003700 Gossypium hirsutum HOM05D000913 ORTHO05D000687 2.2e-06 56.2 135 29.6
Phvul.006G135600 Phaseolus vulgaris HOM05D000913 ORTHO05D000687 2.2e-06 56.2 57 49.1
Sc11g0006740 Simmondsia chinensis HOM05D000913 ORTHO05D000687 2.2e-06 56.2 67 47.8
DCAR_008755 Daucus carota HOM05D000913 ORTHO05D000687 2.9e-06 55.8 93 38.7
FAN11G3382 Fragaria x ananassa HOM05D000913 ORTHO05D000687 2.9e-06 55.8 114 39.5
BcaC05g30224 Brassica carinata HOM05D000913 ORTHO05D000687 3.8e-06 55.5 56 51.8
CiPaw.16G094900 Carya illinoinensis HOM05D000913 ORTHO05D000687 3.8e-06 55.5 98 36.7
Duzib268G0261 Durio zibethinus HOM05D000913 ORTHO05D000687 3.8e-06 55.5 68 45.6
FvH4_3g42071 Fragaria vesca HOM05D000913 ORTHO05D000687 3.8e-06 55.5 136 38.2
Glyma.09G016400 Glycine max HOM05D000913 ORTHO05D000687 3.8e-06 55.5 57 45.6
MD11G1039300 Malus domestica HOM05D000913 ORTHO05D000687 3.8e-06 55.5 71 42.3
Nn1g07601 Nelumbo nucifera HOM05D000913 ORTHO05D000687 3.8e-06 55.5 63 49.2
Cpa.g.sc12.95 Carica papaya HOM05D000913 ORTHO05D000687 5.0e-06 55.1 71 38.0
CiPaw.10G022600 Carya illinoinensis HOM05D000913 ORTHO05D000687 5.0e-06 55.1 57 52.6
CiPaw.10G023100 Carya illinoinensis HOM05D000913 ORTHO05D000687 5.0e-06 55.1 100 36.0
CiPaw.11G201200 Carya illinoinensis HOM05D000913 ORTHO05D000687 5.0e-06 55.1 66 42.4
AUR62026813 Chenopodium quinoa HOM05D000913 ORTHO05D000687 5.0e-06 55.1 67 47.8
FvH4_3g42050 Fragaria vesca HOM05D000913 ORTHO05D000687 5.0e-06 55.1 71 43.7
MBI15_g37255_MAGBIO Magnolia biondii HOM05D000913 ORTHO05D000687 5.0e-06 55.1 66 43.9
MD10G1341200 Malus domestica HOM05D000913 ORTHO05D000687 5.0e-06 55.1 56 46.4
QL05p004788 Quercus lobata HOM05D000913 ORTHO05D000687 5.0e-06 55.1 57 52.6
A05p43030 Brassica napus HOM05D014993 ORTHO05D000687 6.5e-06 54.7 59 49.2
BraA05t23047Z Brassica rapa HOM05D014993 ORTHO05D000687 6.5e-06 54.7 59 49.2
CiPaw.14G082800 Carya illinoinensis HOM05D000913 ORTHO05D000687 6.5e-06 54.7 58 56.9
Thecc.07G006400 Theobroma cacao HOM05D000913 ORTHO05D000687 6.5e-06 54.7 93 37.6
EL10Ac2g02868 Beta vulgaris HOM05D000913 ORTHO05D000687 8.5e-06 54.3 67 44.8
BcaC06g31341 Brassica carinata HOM05D000913 ORTHO05D000687 8.5e-06 54.3 56 51.8
Medtr1g041690 Medicago truncatula HOM05D000913 ORTHO05D000687 8.5e-06 54.3 59 50.8
Medtr3g082260 Medicago truncatula HOM05D000913 ORTHO05D000687 8.5e-06 54.3 59 50.8
QL04p066360 Quercus lobata HOM05D000913 ORTHO05D000687 8.5e-06 54.3 57 50.9
TPR.G10472 Trifolium pratense HOM05D000913 ORTHO05D000687 8.5e-06 54.3 57 49.1


User provided reference genes

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