Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aa31LG10G3760 Aethionema arabicum HOM05D005997 ORTHO05D008323 1.4e-170 602.8 298 100.0
CARHR040570 Cardamine hirsuta HOM05D005997 ORTHO05D008323 2.1e-134 482.6 296 82.8
Sp1g37390 Schrenkiella parvula HOM05D005997 ORTHO05D008323 6.8e-133 477.6 299 80.3
AT1G50575 Arabidopsis thaliana HOM05D005997 ORTHO05D008323 1.5e-132 476.5 299 80.3
Carub.0001s3961 Capsella rubella HOM05D005997 ORTHO05D008323 2.6e-132 475.7 299 79.3
Thhalv10011693m.g Eutrema salsugineum HOM05D005997 ORTHO05D008323 2.2e-131 472.6 301 79.7
AL1G58220 Arabidopsis lyrata HOM05D005997 ORTHO05D008323 4.9e-131 471.5 298 80.5
BraA06t23516Z Brassica rapa HOM05D005997 ORTHO05D008323 9.5e-127 457.2 298 77.5
BcaB07g33491 Brassica carinata HOM05D005997 ORTHO05D008323 6.2e-126 454.5 298 75.8
A06p03040 Brassica napus HOM05D005997 ORTHO05D008323 1.4e-125 453.4 298 76.5
BcaC08g43226 Brassica carinata HOM05D005997 ORTHO05D008323 2.0e-124 449.5 298 75.8
C06p05740 Brassica napus HOM05D005997 ORTHO05D008323 2.0e-124 449.5 298 75.8
BolC6t35684H Brassica oleracea HOM05D005997 ORTHO05D008323 2.0e-124 449.5 298 75.8
THA.LOC104826490 Tarenaya hassleriana HOM05D005997 ORTHO05D008323 4.6e-121 438.3 287 74.9
Gorai.002G095400 Gossypium raimondii HOM05D005997 ORTHO05D008323 5.3e-101 371.7 288 66.3
Gohir.D01G072400 Gossypium hirsutum HOM05D005997 ORTHO05D008323 6.9e-101 371.3 288 66.3
TWI38G0893 Tripterygium wilfordii HOM05D005997 ORTHO05D008323 6.9e-101 371.3 283 64.7
Ciclev10009024m.g Citrus clementina HOM05D005997 ORTHO05D008323 2.6e-100 369.4 298 62.8
FAN21G1688 Fragaria x ananassa HOM05D005997 ORTHO05D008323 7.6e-100 367.9 283 64.7
Eucgr.F03518 Eucalyptus grandis HOM05D005997 ORTHO05D008323 2.2e-99 366.3 245 71.0
Actinidia00103 Actinidia chinensis HOM05D005997 ORTHO05D008323 4.9e-99 365.2 241 72.6
Hma1.2p1_0036F.1_g022850 Hydrangea macrophylla HOM05D005997 ORTHO05D008323 6.4e-99 364.8 250 70.4
Gohir.A01G086200 Gossypium hirsutum HOM05D005997 ORTHO05D008323 1.4e-98 363.6 288 64.9
COL.COLO4_09766 Corchorus olitorius HOM05D005997 ORTHO05D008323 1.9e-98 363.2 231 73.2
Potri.008G180300 Populus trichocarpa HOM05D005997 ORTHO05D008323 2.4e-98 362.8 285 64.9
TAR624G0829 Trochodendron aralioides HOM05D005997 ORTHO05D008323 2.4e-98 362.8 250 69.2
Sabra08G0137600 Salix brachista HOM05D005997 ORTHO05D008323 3.2e-98 362.5 285 64.9
RcHm_v2.0_Chr5g0042111 Rosa chinensis HOM05D005997 ORTHO05D008323 1.6e-97 360.1 283 64.0
RcHm_v2.0_Chr5g0042181 Rosa chinensis HOM05D005997 ORTHO05D008323 2.1e-97 359.8 283 64.3
Dinv40826 Davidia involucrata HOM05D005997 ORTHO05D008323 2.7e-97 359.4 255 69.0
Thecc.07G024000 Theobroma cacao HOM05D005997 ORTHO05D008323 2.7e-97 359.4 250 69.6
CANSAT11G0206 Cannabis sativa HOM05D005997 ORTHO05D008323 6.0e-97 358.2 268 65.3
Manes.03G134100 Manihot esculenta HOM05D005997 ORTHO05D008323 1.0e-96 357.5 283 60.8
arahy.Tifrunner.gnm1.ann1.N1CS9Q Arachis hypogaea HOM05D005997 ORTHO05D008323 1.8e-96 356.7 290 62.1
GSVIVG01037764001 Vitis vinifera HOM05D005997 ORTHO05D008323 2.3e-96 356.3 261 67.4
Duzib213G0008 Durio zibethinus HOM05D005997 ORTHO05D008323 3.0e-96 355.9 285 62.1
arahy.Tifrunner.gnm1.ann1.JACZ02 Arachis hypogaea HOM05D005997 ORTHO05D008323 3.9e-96 355.5 300 59.7
FAN25G0611 Fragaria x ananassa HOM05D005997 ORTHO05D008323 3.9e-96 355.5 308 60.1
CsaV3_7G018710 Cucumis sativus L. HOM05D005997 ORTHO05D008323 2.5e-95 352.8 292 59.6
Medtr3g055920 Medicago truncatula HOM05D005997 ORTHO05D008323 2.5e-95 352.8 230 72.2
Cc05_g14560 Coffea canephora HOM05D005997 ORTHO05D008323 3.3e-95 352.4 246 68.3
PSO210G1255 Papaver somniferum HOM05D005997 ORTHO05D008323 4.3e-95 352.1 233 70.4
VMungo0540G2314 Vigna mungo HOM05D005997 ORTHO05D008323 5.6e-95 351.7 223 72.6
FvH4_3g23860 Fragaria vesca HOM05D005997 ORTHO05D008323 7.4e-95 351.3 218 75.7
Lj6g0009736 Lotus japonicus HOM05D005997 ORTHO05D008323 7.4e-95 351.3 281 61.9
Nn1g03269 Nelumbo nucifera HOM05D005997 ORTHO05D008323 7.4e-95 351.3 294 59.5
Ca_20145_v3 Cicer arietinum L. HOM05D005997 ORTHO05D008323 9.6e-95 350.9 235 69.8
Migut.M01687 Erythranthe guttata HOM05D005997 ORTHO05D008323 1.3e-94 350.5 232 72.8
Sed0012266 Sechium edule HOM05D005997 ORTHO05D008323 1.3e-94 350.5 291 58.8
Solyc07g065180.3 Solanum lycopersicum HOM05D005997 ORTHO05D008323 1.3e-94 350.5 232 70.7
Sopen07g033400 Solanum pennellii HOM05D005997 ORTHO05D008323 1.3e-94 350.5 232 70.7
SGA_v2.0_scaffold168G38522 Striga asiatica HOM05D005997 ORTHO05D008323 1.3e-94 350.5 229 71.6
Nitab4.5_0010102g0010 Nicotiana tabacum HOM05D005997 ORTHO05D008323 1.6e-94 350.1 232 70.7
SalBow8G0955 Salvia bowleyana HOM05D005997 ORTHO05D008323 2.8e-94 349.4 232 71.1
TPR.G1907 Trifolium pratense HOM05D005997 ORTHO05D008323 2.8e-94 349.4 225 73.3
Prupe.4G230500 Prunus persica HOM05D005997 ORTHO05D008323 1.8e-93 346.7 245 67.8
Glyma.08G325100 Glycine max HOM05D005997 ORTHO05D008323 2.4e-93 346.3 226 72.1
Lalb_Chr06g0174051 Lupinus albus HOM05D005997 ORTHO05D008323 2.4e-93 346.3 284 59.9
Phvul.006G051400 Phaseolus vulgaris HOM05D005997 ORTHO05D008323 2.4e-93 346.3 226 70.8
PGSC0003DMG400022292 Solanum tuberosum HOM05D005997 ORTHO05D008323 4.0e-93 345.5 232 69.4
Ca_20142_v3 Cicer arietinum L. HOM05D005997 ORTHO05D008323 6.9e-93 344.7 235 68.9
Nitab4.5_0001160g0200 Nicotiana tabacum HOM05D005997 ORTHO05D008323 6.9e-93 344.7 232 69.8
Sc07g0002940 Simmondsia chinensis HOM05D005997 ORTHO05D008323 9.0e-93 344.4 233 69.5
CiPaw.12G135200 Carya illinoinensis HOM05D005997 ORTHO05D008323 1.2e-92 344.0 215 74.0
Psat5g172000 Pisum sativum HOM05D005997 ORTHO05D008323 1.2e-92 344.0 228 70.2
DCAR_022603 Daucus carota HOM05D005997 ORTHO05D008323 2.0e-92 343.2 275 62.5
MSTRG.6975 Avicennia marina HOM05D005997 ORTHO05D008323 2.6e-92 342.8 236 69.5
CAN.G337.36 Capsicum annuum HOM05D005997 ORTHO05D008323 2.2e-91 339.7 232 68.1
ECA236G3940 Erigeron canadensis HOM05D004336 ORTHO05D005367 2.2e-91 339.7 226 72.6
ClCG09G021010 Citrullus lanatus HOM05D005997 ORTHO05D008323 1.1e-90 337.4 329 53.2
Os03g0587100 Oryza sativa ssp. japonica HOM05D005997 ORTHO05D008323 3.2e-90 335.9 218 71.1
Aqoxy1G04030 Aquilegia oxysepala HOM05D005997 ORTHO05D008323 7.1e-90 334.7 221 70.1
Oeu019619.1 Olea europaea HOM05D005997 ORTHO05D008323 9.3e-90 334.3 278 60.8
MBI16_g42314_MAGBIO Magnolia biondii HOM05D005997 ORTHO05D008323 2.7e-89 332.8 248 66.1
MD11G1206400 Malus domestica HOM05D005997 ORTHO05D008323 7.9e-89 331.3 283 58.7
Zm00001eb049320 Zea mays HOM05D005997 ORTHO05D008323 1.3e-88 330.5 219 69.9
ATR0712G169 Amborella trichopoda HOM05D005997 ORTHO05D008323 2.3e-88 329.7 213 71.4
PGR044G2356 Punica granatum HOM05D005997 ORTHO05D008323 4.3e-87 325.5 215 70.2
Rhsim06G0225700 Rhododendron simsii HOM05D005997 ORTHO05D008323 7.4e-87 324.7 248 64.5
SEGI_04256 Sequoiadendron giganteum HOM05D005997 ORTHO05D008323 7.4e-87 324.7 227 67.4
EL10Ac4g07628 Beta vulgaris HOM05D005997 ORTHO05D008323 2.8e-86 322.8 275 59.3
Lsat_1_v5_gn_7_114661 Lactuca sativa HOM05D005997 ORTHO05D008323 2.0e-84 316.6 240 66.2
unitig_899.g15278 Utricularia gibba HOM05D005997 ORTHO05D008323 1.0e-83 314.3 201 73.6
Lj1C884G3 Lonicera japonica HOM05D005997 ORTHO05D008323 3.8e-83 312.4 226 66.4
Haze_09774 Corylus avellana HOM05D005997 ORTHO05D008323 5.5e-82 308.5 286 57.0
SMO196G0283 Selaginella moellendorffii HOM05D005997 ORTHO05D008323 2.3e-80 303.1 217 63.6
AagrBONN_evm.TU.Sc2ySwM_362.871 Anthoceros agrestis HOM05D005997 ORTHO05D008323 8.7e-80 301.2 227 62.6
MELO3C024895.2 Cucumis melo HOM05D005997 ORTHO05D008323 4.5e-76 288.9 238 60.1
Atru.BG.132.p Acer truncatum HOM05D005997 ORTHO05D008323 1.7e-75 287.0 173 77.5
QL08p008622 Quercus lobata HOM05D005997 ORTHO05D008323 5.0e-75 285.4 176 75.6
Cpa.g.sc12.206 Carica papaya HOM05D005997 ORTHO05D008323 1.9e-74 283.5 173 76.9
Psat5g171680 Pisum sativum HOM05D005997 ORTHO05D008323 9.4e-74 281.2 177 74.6
PGR031G3624 Punica granatum HOM05D005997 ORTHO05D008323 1.2e-73 280.8 186 70.4
Peaxi162Scf00047g00845 Petunia axillaris HOM05D005997 ORTHO05D008323 1.6e-73 280.4 226 61.9
PSO302G0218 Papaver somniferum HOM05D005997 ORTHO05D008323 2.1e-73 280.0 173 76.9
vmacro11568 Vaccinium macrocarpon HOM05D005997 ORTHO05D008323 1.0e-72 277.7 176 74.4
Pp3c14_23810 Physcomitrium patens HOM05D005997 ORTHO05D008323 2.3e-72 276.6 219 58.9
AUR62015935 Chenopodium quinoa HOM05D005997 ORTHO05D008323 8.8e-72 274.6 175 73.1
AUR62040674 Chenopodium quinoa HOM05D005997 ORTHO05D008323 8.8e-72 274.6 176 72.7
CDE07G1873 Ceratophyllum demersum HOM05D005997 ORTHO05D008323 3.4e-68 262.7 203 62.6
Glyma.18G084600 Glycine max HOM05D005997 ORTHO05D008323 4.1e-61 239.2 164 70.1
MCO11G065 Micromonas commoda HOM05D004293 ORTHO05D005044 1.0e-51 208.0 221 44.3
MCO09G728 Micromonas commoda HOM05D004293 ORTHO05D005044 5.0e-51 205.7 221 43.4
arahy.Tifrunner.gnm1.ann1.D6FGWZ Arachis hypogaea HOM05D005997 ORTHO05D008323 1.5e-47 194.1 150 62.0
Cre01.g039850 Chlamydomonas reinhardtii HOM05D005997 ORTHO05D005044 1.5e-47 194.1 225 43.6
CSS0016170 Camellia sinensis var. sinensis HOM05D005997 ORTHO05D008323 2.4e-45 186.8 112 76.8
CSS0047434 Camellia sinensis var. sinensis HOM05D005997 ORTHO05D008323 3.1e-45 186.4 112 76.8
PRCOL_00002636 Prasinoderma coloniale HOM05D005997 ORTHO05D008323 1.6e-44 184.1 224 43.8
PRCOL_00000116 Prasinoderma coloniale HOM05D005997 ORTHO05D008323 2.7e-44 183.3 212 45.3
Dinv10299 Davidia involucrata HOM05D005997 ORTHO05D008323 6.5e-43 178.7 158 58.2
HPP92_007350 Vanilla planifolia HOM05D005997 ORTHO05D008323 6.5e-43 178.7 143 57.3
Cfa020073 Carpinus fangiana HOM05D005997 ORTHO05D008323 1.4e-37 161.0 103 73.8
CSS0025804 Camellia sinensis var. sinensis HOM05D005997 ORTHO05D008323 2.9e-35 153.3 115 63.5
Atru.chr7.2230 Acer truncatum HOM05D005997 ORTHO05D008323 3.3e-34 149.8 97 69.1
Atru.chr7.2351 Acer truncatum HOM05D005997 ORTHO05D008323 3.3e-34 149.8 97 69.1
Prupe.4G230300 Prunus persica HOM05D005997 ORTHO05D008323 4.6e-28 129.4 106 59.4
QL08p004262 Quercus lobata HOM05D005997 ORTHO05D008323 7.8e-28 128.6 131 54.2
QL08p058329 Quercus lobata HOM05D005997 ORTHO05D008323 7.8e-28 128.6 131 54.2
Aqoxy1G04027 Aquilegia oxysepala HOM05D005997 ORTHO05D008323 1.7e-27 127.5 106 54.7
QL05p025044 Quercus lobata HOM05D005997 ORTHO05D008323 5.8e-23 112.5 156 43.6
SEGI_34153 Sequoiadendron giganteum HOM05D005997 ORTHO05D008323 6.0e-20 102.4 94 54.3
CSS0048391 Camellia sinensis var. sinensis HOM05D005997 ORTHO05D008323 6.6e-19 99.0 79 60.8
CSS0044071 Camellia sinensis var. sinensis HOM05D005997 ORTHO05D008323 2.2e-14 84.0 56 69.6
QL08p004281 Quercus lobata HOM05D005997 ORTHO05D007626 4.1e-13 79.7 126 38.9
QL08p004325 Quercus lobata HOM05D005997 ORTHO05D337094 2.7e-12 77.0 105 43.8
QL11p054366 Quercus lobata HOM05D005997 ORTHO05D338109 2.7e-12 77.0 105 43.8
CSS0025137 Camellia sinensis var. sinensis HOM05D005997 ORTHO05D008323 7.8e-12 75.5 50 70.0
QL08p058354 Quercus lobata HOM05D005997 ORTHO05D007626 1.3e-11 74.7 131 36.6
Rhsim03G0100400 Rhododendron simsii HOM05D005997 ORTHO05D338268 1.9e-10 70.9 129 34.9
arahy.Tifrunner.gnm1.ann1.U3B0HF Arachis hypogaea HOM05D003842 ORTHO05D026908 5.8e-07 59.3 35 80.0
QL08p004656 Quercus lobata HOM05D005997 ORTHO05D337365 2.2e-06 57.4 56 48.2
Lsat_1_v5_gn_8_39280 Lactuca sativa HOM05D005997 ORTHO05D230963 2.9e-06 57.0 48 56.2
Lalb_Chr02g0154601 Lupinus albus HOM05D000450 ORTHO05D000327 6.4e-06 55.8 177 31.6


User provided reference genes

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