Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aa31LG10G360 Aethionema arabicum HOM05D007278 ORTHO05D009280 9.2e-279 963.0 511 100.0
AL1G63950 Arabidopsis lyrata HOM05D007278 ORTHO05D009280 2.3e-197 692.6 504 75.6
Sp1g41410 Schrenkiella parvula HOM05D007278 ORTHO05D009280 1.5e-191 673.3 504 73.6
AT1G55830 Arabidopsis thaliana HOM05D007278 ORTHO05D009280 1.0e-189 667.2 504 73.6
BcaB07g33186 Brassica carinata HOM05D007278 ORTHO05D009280 8.3e-171 604.4 508 68.1
BcaC08g43656 Brassica carinata HOM05D007278 ORTHO05D009280 2.8e-158 562.8 510 64.7
C06p10730 Brassica napus HOM05D007278 ORTHO05D009280 2.8e-158 562.8 510 64.7
BolC6t36159H Brassica oleracea HOM05D007278 ORTHO05D009280 2.9e-155 552.7 502 64.9
Carub.0001s4440 Capsella rubella HOM05D007278 ORTHO05D009280 6.4e-155 551.6 420 72.1
BraSC56t46403Z Brassica rapa HOM05D007278 ORTHO05D009280 7.8e-153 544.7 512 63.7
Thhalv10011545m.g Eutrema salsugineum HOM05D007278 ORTHO05D009280 8.1e-150 534.6 420 71.4
THA.LOC104822724 Tarenaya hassleriana HOM05D007278 ORTHO05D009280 2.6e-148 529.6 521 59.3
CARHR045530 Cardamine hirsuta HOM05D007278 ORTHO05D009280 4.1e-146 522.3 422 71.1
Atru.chr2.3762 Acer truncatum HOM05D007278 ORTHO05D009280 6.9e-109 398.7 512 46.7
Gorai.013G150800 Gossypium raimondii HOM05D007278 ORTHO05D009280 2.6e-108 396.7 527 45.4
Cfa016926 Carpinus fangiana HOM05D007278 ORTHO05D009280 4.5e-108 396.0 543 45.1
Ciclev10010817m.g Citrus clementina HOM05D007278 ORTHO05D009280 1.7e-107 394.0 505 46.7
Gohir.D13G134500 Gossypium hirsutum HOM05D007278 ORTHO05D009280 2.9e-107 393.3 523 45.1
GSVIVG01014732001 Vitis vinifera HOM05D007278 ORTHO05D009280 6.5e-107 392.1 535 44.3
Gohir.A13G131200 Gossypium hirsutum HOM05D007278 ORTHO05D009280 2.5e-106 390.2 526 44.5
Atru.chr2.3748 Acer truncatum HOM05D007278 ORTHO05D009280 1.6e-105 387.5 513 46.4
Haze_09857 Corylus avellana HOM05D007278 ORTHO05D009280 2.7e-105 386.7 540 45.2
COL.COLO4_07734 Corchorus olitorius HOM05D007278 ORTHO05D009280 2.6e-100 370.2 515 45.2
Duzib213G0397 Durio zibethinus HOM05D007278 ORTHO05D009280 4.5e-100 369.4 525 44.8
MD11G1036100 Malus domestica HOM05D007278 ORTHO05D009280 7.6e-100 368.6 507 44.6
TWI38G0395 Tripterygium wilfordii HOM05D007278 ORTHO05D009280 5.0e-99 365.9 520 44.8
Lj8A180T100 Lonicera japonica HOM05D007278 ORTHO05D009280 5.5e-98 362.5 532 43.4
Actinidia03626 Actinidia chinensis HOM05D007278 ORTHO05D009280 7.2e-98 362.1 524 43.7
Hma1.2p1_1094F.1_g256380 Hydrangea macrophylla HOM05D007278 ORTHO05D009280 9.3e-98 361.7 513 44.6
Thecc.07G008600 Theobroma cacao HOM05D007278 ORTHO05D009280 1.3e-96 357.8 498 45.0
Potri.001G370700 Populus trichocarpa HOM05D007278 ORTHO05D009280 2.3e-96 357.1 497 44.3
TAR626G0410 Trochodendron aralioides HOM05D007278 ORTHO05D009280 6.7e-96 355.5 527 43.3
vmacro09628 Vaccinium macrocarpon HOM05D007278 ORTHO05D009280 3.7e-94 349.7 530 42.6
ClCG10G004340 Citrullus lanatus HOM05D007278 ORTHO05D009280 1.4e-93 347.8 515 44.3
Rhsim04G0010900 Rhododendron simsii HOM05D007278 ORTHO05D009280 2.4e-93 347.1 528 41.7
CSS0042987 Camellia sinensis var. sinensis HOM05D007278 ORTHO05D009280 2.6e-92 343.6 527 41.7
Sabra16G0243500 Salix brachista HOM05D007278 ORTHO05D009280 2.2e-91 340.5 502 42.0
MELO3C014108.2 Cucumis melo HOM05D007278 ORTHO05D009280 2.9e-91 340.1 518 43.1
HanXRQChr11g0334411 Helianthus annuus HOM05D007278 ORTHO05D009280 5.0e-91 339.3 518 42.1
FvH4_3g42411 Fragaria vesca HOM05D007278 ORTHO05D009280 1.6e-89 334.3 506 43.3
FAN11G3173 Fragaria x ananassa HOM05D007278 ORTHO05D009280 7.9e-89 332.0 512 42.6
FAN28G1934 Fragaria x ananassa HOM05D007278 ORTHO05D009280 1.1e-87 328.2 506 42.1
FAN21G2048 Fragaria x ananassa HOM05D007278 ORTHO05D009280 1.5e-87 327.8 506 42.5
Sed0005179 Sechium edule HOM05D007278 ORTHO05D009280 4.8e-86 322.8 542 40.6
Nn7g37466 Nelumbo nucifera HOM05D007278 ORTHO05D009280 3.1e-85 320.1 547 39.7
PGR031G2600 Punica granatum HOM05D007278 ORTHO05D009280 2.0e-84 317.4 514 40.9
EL10Ac4g07533 Beta vulgaris HOM05D007278 ORTHO05D009280 1.7e-83 314.3 525 39.2
FAN16G1801 Fragaria x ananassa HOM05D007278 ORTHO05D009280 1.7e-83 314.3 495 41.8
PSO210G1309 Papaver somniferum HOM05D007278 ORTHO05D009280 8.5e-83 312.0 521 38.6
QL08p003254 Quercus lobata HOM05D007278 ORTHO05D009280 8.5e-83 312.0 439 46.0
Cpa.g.sc12.134 Carica papaya HOM05D007278 ORTHO05D009280 1.4e-82 311.2 524 38.5
RcHm_v2.0_Chr5g0075911 Rosa chinensis HOM05D007278 ORTHO05D009280 7.2e-82 308.9 509 41.7
Migut.M01628 Erythranthe guttata HOM05D007278 ORTHO05D009280 2.7e-81 307.0 509 38.9
ATR0751G235 Amborella trichopoda HOM05D007278 ORTHO05D009280 6.1e-81 305.8 540 39.3
Solyc07g065760.3 Solanum lycopersicum HOM05D007278 ORTHO05D009280 1.0e-80 305.1 516 37.4
PGSC0003DMG400022161 Solanum tuberosum HOM05D007278 ORTHO05D009280 1.0e-80 305.1 521 38.6
CiPaw.11G206100 Carya illinoinensis HOM05D007278 ORTHO05D009280 3.9e-80 303.1 456 42.5
CANSAT11G0150 Cannabis sativa HOM05D007278 ORTHO05D009280 8.8e-80 302.0 513 38.8
SalBow8G0571 Salvia bowleyana HOM05D007278 ORTHO05D009280 2.0e-79 300.8 511 40.1
SalBow8G0318 Salvia bowleyana HOM05D007278 ORTHO05D009280 2.6e-79 300.4 511 40.7
Nitab4.5_0000152g0330 Nicotiana tabacum HOM05D007278 ORTHO05D009280 3.3e-79 300.1 519 39.1
Manes.15G057600 Manihot esculenta HOM05D007278 ORTHO05D009280 4.4e-79 299.7 432 43.5
Nitab4.5_0010643g0030 Nicotiana tabacum HOM05D007278 ORTHO05D009280 7.4e-79 298.9 515 39.4
Sopen07g033970 Solanum pennellii HOM05D007278 ORTHO05D009280 7.4e-79 298.9 518 37.8
Peaxi162Scf00139g00103 Petunia axillaris HOM05D007278 ORTHO05D009280 1.4e-77 294.7 519 39.5
Dinv10356 Davidia involucrata HOM05D007278 ORTHO05D009280 3.5e-76 290.0 459 42.5
Prupe.6G026900 Prunus persica HOM05D007278 ORTHO05D009280 1.7e-75 287.7 422 45.0
Cc05_g15160 Coffea canephora HOM05D007278 ORTHO05D009280 5.5e-74 282.7 504 38.5
Lsat_1_v5_gn_7_114160 Lactuca sativa HOM05D007278 ORTHO05D009280 4.0e-72 276.6 504 37.1
ECA236G2022 Erigeron canadensis HOM05D007278 ORTHO05D009280 6.7e-72 275.8 517 36.8
Oeu005473.1 Olea europaea HOM05D007278 ORTHO05D009280 2.0e-71 274.2 496 38.5
AUR62035670 Chenopodium quinoa HOM05D007278 ORTHO05D009280 2.2e-67 260.8 459 38.3
CDE10G0141 Ceratophyllum demersum HOM05D007278 ORTHO05D009280 1.2e-65 255.0 514 36.8
Lj6g0007693 Lotus japonicus HOM05D007278 ORTHO05D009280 8.0e-65 252.3 263 53.2
SEGI_11808 Sequoiadendron giganteum HOM05D007278 ORTHO05D009280 1.0e-64 251.9 596 31.4
CAN.G623.31 Capsicum annuum HOM05D007278 ORTHO05D009280 2.0e-63 247.7 434 39.6
CsaV3_3G004120 Cucumis sativus L. HOM05D007278 ORTHO05D009280 4.8e-62 243.0 259 51.4
Ca_12446_v3 Cicer arietinum L. HOM05D007278 ORTHO05D009280 5.9e-60 236.1 268 50.4
Phvul.006G059206 Phaseolus vulgaris HOM05D007278 ORTHO05D009280 5.9e-60 236.1 263 50.2
TPR.G17958 Trifolium pratense HOM05D007278 ORTHO05D009280 5.9e-60 236.1 347 45.2
MD03G1032400 Malus domestica HOM05D007278 ORTHO05D009280 1.0e-59 235.3 255 52.5
AUR62017137 Chenopodium quinoa HOM05D007278 ORTHO05D009280 1.7e-59 234.6 459 35.7
VMungo0540G0529 Vigna mungo HOM05D007278 ORTHO05D009280 2.5e-58 230.7 266 48.9
Eucgr.F03677 Eucalyptus grandis HOM05D007278 ORTHO05D009280 1.6e-57 228.0 268 50.4
Ca_14732_v3 Cicer arietinum L. HOM05D007278 ORTHO05D009280 6.8e-56 222.6 240 52.5
Lalb_Chr20g0114071 Lupinus albus HOM05D007278 ORTHO05D009280 1.2e-55 221.9 357 41.5
Glyma.18G074900 Glycine max HOM05D007278 ORTHO05D009280 1.5e-55 221.5 246 49.6
Hund23054 Selenicereus undatus HOM05D007278 ORTHO05D000105 4.5e-52 209.9 438 35.2
Pp3c7_290 Physcomitrium patens HOM05D007278 ORTHO05D009280 1.1e-50 205.3 586 30.4
HPP92_028502 Vanilla planifolia HOM05D007278 ORTHO05D009280 1.8e-48 198.0 440 34.1
Aqoxy1G02222 Aquilegia oxysepala HOM05D007278 ORTHO05D009280 8.9e-48 195.7 265 42.3
arahy.Tifrunner.gnm1.ann1.BC78PS Arachis hypogaea HOM05D007278 ORTHO05D009280 9.2e-45 185.7 341 38.1
MD03G1032000 Malus domestica HOM05D007278 ORTHO05D009280 1.2e-44 185.3 146 65.8
AagrBONN_evm.TU.Sc2ySwM_344.4166 Anthoceros agrestis HOM05D007278 ORTHO05D009280 7.8e-44 182.6 603 26.5
arahy.Tifrunner.gnm1.ann1.E9ZV4R Arachis hypogaea HOM05D007278 ORTHO05D009280 5.0e-43 179.9 341 37.2
Psat5g165280 Pisum sativum HOM05D007278 ORTHO05D009280 2.3e-35 154.5 333 36.3
Mapoly0076s0093 Marchantia polymorpha HOM05D007278 ORTHO05D009280 9.9e-31 139.0 241 35.7
BraA06t23216Z Brassica rapa HOM05D007278 ORTHO05D009280 1.4e-29 135.2 168 53.6
Ah.09g234860 Amaranthus hybridus HOM05D007278 ORTHO05D009280 2.8e-25 120.9 363 28.1
HPP92_017877 Vanilla planifolia HOM05D007278 ORTHO05D009280 3.8e-22 110.5 112 51.8
QL08p003251 Quercus lobata HOM05D007278 ORTHO05D009280 5.2e-16 90.1 87 47.1
SEGI_34890 Sequoiadendron giganteum HOM05D007278 ORTHO05D009280 9.9e-15 85.9 86 44.2
Hma1.2p1_0604F.1_g187790 Hydrangea macrophylla HOM05D007278 ORTHO05D009280 7.1e-13 79.7 78 52.6
Hma1.2p1_0292F.1_g115510 Hydrangea macrophylla HOM05D007278 ORTHO05D009280 9.6e-10 69.3 66 50.0
HPP92_017878 Vanilla planifolia HOM05D007278 ORTHO05D009280 9.9e-07 59.3 54 57.4
Thecc.07G008800 Theobroma cacao HOM05D007278 ORTHO05D009280 1.7e-06 58.5 70 47.1


User provided reference genes

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