Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aa31LG10G2880 Aethionema arabicum HOM05D012542 ORTHO05D010186 1.7e-35 152.1 75 100.0
AT1G51920 Arabidopsis thaliana HOM05D012542 ORTHO05D010186 5.9e-17 90.5 78 62.8
THA.LOC104810546 Tarenaya hassleriana HOM05D012542 ORTHO05D010186 5.9e-17 90.5 74 62.2
AL1G59964 Arabidopsis lyrata HOM05D012542 ORTHO05D010186 2.2e-16 88.6 77 63.6
Carub.0001s4085 Capsella rubella HOM05D012542 ORTHO05D010186 9.4e-15 83.2 84 57.1
A05p19260 Brassica napus HOM05D012542 ORTHO05D010186 6.8e-13 77.0 81 55.6
BraA05t20831Z Brassica rapa HOM05D012542 ORTHO05D010186 6.8e-13 77.0 81 55.6
BcaC08g43950 Brassica carinata HOM05D012542 ORTHO05D010186 7.5e-12 73.6 80 51.2
BcaC08g43951 Brassica carinata HOM05D012542 ORTHO05D010186 7.5e-12 73.6 80 51.2
C06p13490 Brassica napus HOM05D012542 ORTHO05D010186 7.5e-12 73.6 80 51.2
BolC6t36512H Brassica oleracea HOM05D012542 ORTHO05D010186 7.5e-12 73.6 80 51.2
Haze_15885 Corylus avellana HOM05D008383 ORTHO05D010186 4.1e-10 67.8 74 47.3
ClCG09G000350 Citrullus lanatus HOM05D008383 ORTHO05D010186 5.3e-10 67.4 67 50.7
Haze_15886 Corylus avellana HOM05D008383 ORTHO05D010186 5.3e-10 67.4 74 47.3
Dinv30420 Davidia involucrata HOM05D008383 ORTHO05D010186 1.6e-09 65.9 72 50.0
Nn8g38998 Nelumbo nucifera HOM05D008383 ORTHO05D010186 2.0e-09 65.5 70 48.6
Medtr2g100440 Medicago truncatula HOM05D008383 ORTHO05D010186 3.5e-09 64.7 78 44.9
Sed0013242 Sechium edule HOM05D008383 ORTHO05D010186 5.9e-09 63.9 71 45.1
CiPaw.01G229300 Carya illinoinensis HOM05D008383 ORTHO05D010186 7.7e-09 63.5 71 45.1
Sed0020534 Sechium edule HOM05D008383 ORTHO05D010186 2.2e-08 62.0 77 45.5
CsaV3_7G035160 Cucumis sativus L. HOM05D008383 ORTHO05D010186 3.8e-08 61.2 66 50.0
Haze_15879 Corylus avellana HOM05D008383 ORTHO05D010186 5.0e-08 60.8 76 46.1
Haze_15884 Corylus avellana HOM05D008383 ORTHO05D010186 5.0e-08 60.8 71 45.1
CiPaw.02G144300 Carya illinoinensis HOM05D008383 ORTHO05D010186 1.1e-07 59.7 69 44.9
Manes.11G030500 Manihot esculenta HOM05D008383 ORTHO05D010186 1.1e-07 59.7 69 46.4
Potri.001G172850 Populus trichocarpa HOM05D008383 ORTHO05D010186 1.9e-07 58.9 75 45.3
COL.COLO4_30545 Corchorus olitorius HOM05D008383 ORTHO05D010186 2.5e-07 58.5 74 45.9
Migut.I00966 Erythranthe guttata HOM05D008383 ORTHO05D010186 2.5e-07 58.5 68 42.6
Nn8g38999 Nelumbo nucifera HOM05D008383 ORTHO05D010186 5.5e-07 57.4 72 45.8
Thhalv10011907m.g Eutrema salsugineum HOM05D012542 ORTHO05D010186 7.2e-07 57.0 71 46.5
RcHm_v2.0_Chr2g0141731 Rosa chinensis HOM05D008383 ORTHO05D010186 7.2e-07 57.0 60 46.7
AT1G51913 Arabidopsis thaliana HOM05D009023 ORTHO05D011144 1.2e-06 56.2 68 44.1
MD17G1179900 Malus domestica HOM05D008383 ORTHO05D010186 2.1e-06 55.5 63 44.4
CiPaw.01G228700 Carya illinoinensis HOM05D008383 ORTHO05D010186 6.1e-06 53.9 55 49.1
unitig_37.g12266 Utricularia gibba HOM05D066644 ORTHO05D010186 8.0e-06 53.5 58 46.6


User provided reference genes

Program Settings