Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aa31LG10G2570 Aethionema arabicum HOM05D010933 ORTHO05D013136 6.7e-29 130.2 75 100.0
AL4G13500 Arabidopsis lyrata HOM05D010933 ORTHO05D013136 1.3e-11 72.8 36 83.3
CARHR042480 Cardamine hirsuta HOM05D010933 ORTHO05D013136 1.7e-11 72.4 79 50.6
AL1G60560 Arabidopsis lyrata HOM05D010933 ORTHO05D013136 3.7e-11 71.2 34 85.3
BcaC08g43411 Brassica carinata HOM05D010933 ORTHO05D013136 1.4e-10 69.3 75 52.0
Sp1g38930 Schrenkiella parvula HOM05D010933 ORTHO05D013136 1.4e-10 69.3 78 52.6
A08p02170 Brassica napus HOM05D010933 ORTHO05D013136 9.1e-10 66.6 33 78.8
BraA08t32264Z Brassica rapa HOM05D010933 ORTHO05D013136 9.1e-10 66.6 33 78.8
BcaB04g17155 Brassica carinata HOM05D010933 ORTHO05D013136 1.2e-09 66.2 39 71.8
C03p90620 Brassica napus HOM05D010933 ORTHO05D013136 1.2e-09 66.2 37 73.0
BolC3t21384H Brassica oleracea HOM05D010933 ORTHO05D013136 1.2e-09 66.2 37 73.0
BcaC01g01322 Brassica carinata HOM05D010933 ORTHO05D013136 1.6e-09 65.9 34 76.5
AT1G52342 Arabidopsis thaliana HOM05D010933 ORTHO05D013136 2.7e-09 65.1 28 89.3
BcaC01g01321 Brassica carinata HOM05D010933 ORTHO05D013136 3.5e-09 64.7 32 78.1
C06p13920 Brassica napus HOM05D010933 ORTHO05D013136 1.7e-08 62.4 58 51.7
Carub.0001s4134 Capsella rubella HOM05D010933 ORTHO05D013136 2.7e-06 55.1 27 77.8
CsaV3_7G033200 Cucumis sativus L. HOM05D010933 ORTHO05D013136 8.0e-06 53.5 32 59.4


User provided reference genes

Program Settings