Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aa31LG10G2470 Aethionema arabicum HOM05D006506 ORTHO05D007809 1.0e-179 633.3 320 100.0
AL1G60780 Arabidopsis lyrata HOM05D006506 ORTHO05D007809 4.4e-170 601.3 320 93.4
Carub.0001s4149 Capsella rubella HOM05D006506 ORTHO05D007809 5.7e-170 600.9 320 93.8
CARHR042650 Cardamine hirsuta HOM05D006506 ORTHO05D007809 1.3e-169 599.7 320 93.4
Thhalv10011665m.g Eutrema salsugineum HOM05D006506 ORTHO05D007809 4.9e-169 597.8 320 92.5
AT1G52530 Arabidopsis thaliana HOM05D006506 ORTHO05D007809 1.8e-168 595.9 320 92.5
Sp1g39080 Schrenkiella parvula HOM05D006506 ORTHO05D007809 3.1e-168 595.1 320 92.5
BcaB02g10986 Brassica carinata HOM05D006506 ORTHO05D007809 1.6e-167 592.8 320 92.5
BraA05t20791Z Brassica rapa HOM05D006506 ORTHO05D007809 5.0e-166 587.8 320 91.9
A05p18940 Brassica napus HOM05D006506 ORTHO05D007809 6.6e-166 587.4 320 91.9
BcaC08g44001 Brassica carinata HOM05D006506 ORTHO05D007809 5.6e-165 584.3 320 91.9
C06p14060 Brassica napus HOM05D006506 ORTHO05D007809 7.3e-165 583.9 320 91.6
BolC6t36584H Brassica oleracea HOM05D006506 ORTHO05D007809 7.3e-165 583.9 320 91.6
Thecc.06G030600 Theobroma cacao HOM05D006506 ORTHO05D007809 1.7e-150 536.2 317 83.3
Duzib160G0598 Durio zibethinus HOM05D006506 ORTHO05D007809 2.3e-150 535.8 320 81.6
COL.COLO4_11906 Corchorus olitorius HOM05D006506 ORTHO05D007809 8.6e-150 533.9 320 82.2
Duzib160G0645 Durio zibethinus HOM05D006506 ORTHO05D007809 1.5e-149 533.1 320 81.6
TWI75G0153 Tripterygium wilfordii HOM05D006506 ORTHO05D007809 1.9e-149 532.7 320 81.2
Cfa001948 Carpinus fangiana HOM05D006506 ORTHO05D007809 8.9e-147 523.9 320 80.9
Haze_13452 Corylus avellana HOM05D006506 ORTHO05D007809 1.5e-146 523.1 320 80.6
CiPaw.01G249400 Carya illinoinensis HOM05D006506 ORTHO05D007809 2.0e-146 522.7 320 80.6
Gohir.D06G120300 Gossypium hirsutum HOM05D006506 ORTHO05D007809 5.8e-146 521.2 320 80.0
Cpa.g.sc67.28 Carica papaya HOM05D006506 ORTHO05D007809 4.9e-145 518.1 320 79.1
Gohir.A06G107700 Gossypium hirsutum HOM05D006506 ORTHO05D007809 6.4e-145 517.7 320 79.7
Ciclev10026100m.g Citrus clementina HOM05D006506 ORTHO05D007809 8.3e-145 517.3 319 80.3
CsaV3_7G032300 Cucumis sativus L. HOM05D006506 ORTHO05D007809 1.4e-144 516.5 320 79.4
Gorai.010G138400 Gossypium raimondii HOM05D006506 ORTHO05D007809 1.9e-144 516.2 320 79.4
MD17G1214300 Malus domestica HOM05D006506 ORTHO05D007809 3.2e-144 515.4 320 79.4
Prupe.3G090200 Prunus persica HOM05D006506 ORTHO05D007809 4.1e-144 515.0 320 79.4
MELO3C023430.2 Cucumis melo HOM05D006506 ORTHO05D007809 1.2e-143 513.5 320 79.1
Sed0005275 Sechium edule HOM05D006506 ORTHO05D007809 1.7e-142 509.6 320 77.8
Duzib235G0689 Durio zibethinus HOM05D006506 ORTHO05D007809 3.0e-142 508.8 322 78.6
Actinidia15748 Actinidia chinensis HOM05D006506 ORTHO05D007809 1.6e-140 503.1 327 75.5
Potri.001G201700 Populus trichocarpa HOM05D006506 ORTHO05D007809 2.1e-140 502.7 321 79.4
CSS0043074 Camellia sinensis var. sinensis HOM05D006506 ORTHO05D007809 2.8e-140 502.3 327 76.1
CSS0005655 Camellia sinensis var. sinensis HOM05D006506 ORTHO05D007809 1.1e-139 500.4 327 75.8
CANSAT56G2592 Cannabis sativa HOM05D006506 ORTHO05D007809 1.8e-139 499.6 320 77.2
FAN02G0099 Fragaria x ananassa HOM05D006506 ORTHO05D007809 8.9e-139 497.3 320 77.2
FAN14G4998 Fragaria x ananassa HOM05D000001 ORTHO05D007809 8.9e-139 497.3 320 77.2
SHI11239 Sapria himalayana HOM05D006506 ORTHO05D007809 8.9e-139 497.3 322 75.8
FAN05G2665 Fragaria x ananassa HOM05D000001 ORTHO05D007809 2.0e-138 496.1 320 77.2
FAN09G0903 Fragaria x ananassa HOM05D006506 ORTHO05D007809 2.0e-138 496.1 320 77.2
Rhsim08G0211600 Rhododendron simsii HOM05D006506 ORTHO05D007809 2.6e-138 495.7 327 75.5
FvH4_6g29440 Fragaria vesca HOM05D006506 ORTHO05D007809 3.4e-138 495.4 320 76.9
Dinv38132 Davidia involucrata HOM05D006506 ORTHO05D007809 4.4e-138 495.0 328 75.0
vmacro19011 Vaccinium macrocarpon HOM05D006506 ORTHO05D007809 4.4e-138 495.0 324 75.3
DCAR_021353 Daucus carota HOM05D006506 ORTHO05D007809 7.6e-138 494.2 326 76.7
RcHm_v2.0_Chr2g0134931 Rosa chinensis HOM05D006506 ORTHO05D007809 1.3e-137 493.4 320 76.9
Sabra01G0159300 Salix brachista HOM05D006506 ORTHO05D007809 3.8e-137 491.9 321 77.3
GSVIVG01017366001 Vitis vinifera HOM05D006506 ORTHO05D007809 1.1e-136 490.3 323 74.3
Lsat_1_v5_gn_4_87520 Lactuca sativa HOM05D006506 ORTHO05D007809 4.1e-136 488.4 323 75.2
Lj2g0016250 Lotus japonicus HOM05D006506 ORTHO05D007809 5.4e-136 488.0 322 74.2
arahy.Tifrunner.gnm1.ann1.9QS0XN Arachis hypogaea HOM05D006506 ORTHO05D007809 2.1e-135 486.1 320 73.4
ECA232G3059 Erigeron canadensis HOM05D006506 ORTHO05D007809 4.6e-135 485.0 323 74.3
arahy.Tifrunner.gnm1.ann1.SP1H5F Arachis hypogaea HOM05D006506 ORTHO05D007809 6.0e-135 484.6 320 73.1
PGSC0003DMG400014148 Solanum tuberosum HOM05D006506 ORTHO05D007809 6.0e-135 484.6 328 71.6
Ca_04862_v3 Cicer arietinum L. HOM05D006506 ORTHO05D007809 1.3e-134 483.4 320 72.8
Lalb_Chr06g0175141 Lupinus albus HOM05D006506 ORTHO05D007809 3.9e-134 481.9 326 73.3
Glyma.13G059800 Glycine max HOM05D006506 ORTHO05D007809 1.1e-133 480.3 320 74.1
Sopen03g036430 Solanum pennellii HOM05D006506 ORTHO05D007809 1.5e-133 479.9 328 71.0
Ciclev10027407m.g Citrus clementina HOM05D006506 ORTHO05D007809 1.9e-133 479.6 318 76.1
HanXRQChr16g0500351 Helianthus annuus HOM05D006506 ORTHO05D007809 1.9e-133 479.6 325 73.5
Peaxi162Scf00553g00510 Petunia axillaris HOM05D006506 ORTHO05D007809 2.5e-133 479.2 328 72.3
VMungo0464G1487 Vigna mungo HOM05D006506 ORTHO05D007809 1.1e-131 473.8 321 72.6
CAN.G407.9 Capsicum annuum HOM05D006506 ORTHO05D007809 1.8e-131 473.0 328 70.7
Cc04_g04540 Coffea canephora HOM05D006506 ORTHO05D007809 1.8e-131 473.0 324 71.6
Phvul.004G032600 Phaseolus vulgaris HOM05D006506 ORTHO05D007809 1.8e-131 473.0 320 71.9
TAR371G0436 Trochodendron aralioides HOM05D006506 ORTHO05D007809 2.4e-131 472.6 321 71.7
Nitab4.5_0005461g0020 Nicotiana tabacum HOM05D006506 ORTHO05D007809 6.9e-131 471.1 328 70.7
PGR031G2298 Punica granatum HOM05D006506 ORTHO05D007809 6.9e-131 471.1 323 73.1
Medtr1g082730 Medicago truncatula HOM05D006506 ORTHO05D007809 1.2e-130 470.3 320 70.6
Nitab4.5_0010868g0010 Nicotiana tabacum HOM05D006506 ORTHO05D007809 2.6e-130 469.2 328 70.4
TPR.G16552 Trifolium pratense HOM05D006506 ORTHO05D007809 7.6e-130 467.6 320 70.0
THA.LOC104818016 Tarenaya hassleriana HOM05D006506 ORTHO05D007809 9.9e-130 467.2 268 88.8
PSO210G7208 Papaver somniferum HOM05D006506 ORTHO05D007809 1.3e-129 466.8 320 70.3
Psat1g070040 Pisum sativum HOM05D006506 ORTHO05D007809 2.9e-129 465.7 320 70.3
Ciclev10026188m.g Citrus clementina HOM05D006506 ORTHO05D007809 1.9e-128 463.0 318 74.5
Ciclev10027493m.g Citrus clementina HOM05D006506 ORTHO05D007809 2.1e-127 459.5 300 77.7
Ciclev10027064m.g Citrus clementina HOM05D006506 ORTHO05D007809 1.7e-126 456.4 300 76.7
MBI06_g17213_MAGBIO Magnolia biondii HOM05D006506 ORTHO05D007809 8.7e-126 454.1 317 70.3
Oeu027841.1 Olea europaea HOM05D006506 ORTHO05D007809 1.6e-124 449.9 326 69.3
Ciclev10027055m.g Citrus clementina HOM05D006506 ORTHO05D007809 1.5e-122 443.4 305 75.1
Solyc03g117530.1 Solanum lycopersicum HOM05D006506 ORTHO05D007809 7.6e-122 441.0 303 71.0
MSTRG.11150 Avicennia marina HOM05D006506 ORTHO05D007809 5.4e-120 434.9 320 67.8
SGA_v2.0_scaffold37G14756 Striga asiatica HOM05D006506 ORTHO05D007809 8.7e-118 427.6 320 66.6
HPP92_007331 Vanilla planifolia HOM05D006506 ORTHO05D007809 2.5e-117 426.0 317 65.6
ATR0605G102 Amborella trichopoda HOM05D006506 ORTHO05D007809 6.9e-115 417.9 318 64.8
SalBow2G1795 Salvia bowleyana HOM05D006506 ORTHO05D007809 2.0e-114 416.4 320 64.7
unitig_62.g23595 Utricularia gibba HOM05D006506 ORTHO05D007809 5.8e-114 414.8 320 64.1
Manes.11G058300 Manihot esculenta HOM05D006506 ORTHO05D007809 6.4e-113 411.4 258 81.0
SEGI_33428 Sequoiadendron giganteum HOM05D006506 ORTHO05D007809 1.9e-112 409.8 319 62.4
Aqoxy7G02198 Aquilegia oxysepala HOM05D006506 ORTHO05D007809 1.0e-110 404.1 293 66.6
Migut.I00752 Erythranthe guttata HOM05D006506 ORTHO05D007809 1.0e-110 404.1 320 64.4
Ah.08g214330 Amaranthus hybridus HOM05D006506 ORTHO05D007809 3.7e-108 395.6 318 62.9
Os04g0528400 Oryza sativa ssp. japonica HOM05D006506 ORTHO05D007809 1.5e-106 390.2 326 58.0
AUR62030047 Chenopodium quinoa HOM05D006506 ORTHO05D007809 8.4e-105 384.4 318 61.6
EL10Ac7g17638 Beta vulgaris HOM05D006506 ORTHO05D007809 9.3e-104 380.9 311 62.4
AagrBONN_evm.TU.Sc2ySwM_117.4079 Anthoceros agrestis HOM05D006506 ORTHO05D007809 1.2e-103 380.6 315 58.4
Ciclev10027054m.g Citrus clementina HOM05D006506 ORTHO05D007809 6.0e-103 378.3 257 76.7
HPP92_007333 Vanilla planifolia HOM05D006506 ORTHO05D007809 2.3e-102 376.3 320 60.6
Pp3c1_24880 Physcomitrium patens HOM05D006506 ORTHO05D007809 2.4e-99 366.3 317 56.8
Atru.chr1.2888 Acer truncatum HOM05D006506 ORTHO05D007809 1.3e-97 360.5 251 74.5
AUR62002633 Chenopodium quinoa HOM05D006506 ORTHO05D007809 7.9e-95 351.3 293 61.4
SMO115G0207 Selaginella moellendorffii HOM05D006506 ORTHO05D007809 2.3e-94 349.7 316 54.7
Mapoly0090s0026 Marchantia polymorpha HOM05D006506 ORTHO05D007809 1.3e-92 344.0 320 55.3
Zm00001eb427100 Zea mays HOM05D006506 ORTHO05D007809 1.1e-91 340.9 327 52.3
Ciclev10027056m.g Citrus clementina HOM05D006506 ORTHO05D007809 5.3e-91 338.6 306 61.4
CBR_g8656 Chara braunii HOM05D006506 ORTHO05D007809 6.7e-86 321.6 321 50.2
Lj9E498T1 Lonicera japonica HOM05D006506 ORTHO05D007809 2.0e-85 320.1 214 74.3
CDE11G1201 Ceratophyllum demersum HOM05D006506 ORTHO05D007809 1.7e-81 307.0 287 56.8
Sc05g0005410 Simmondsia chinensis HOM05D006506 ORTHO05D007809 1.7e-81 307.0 285 56.1
CDE08G0717 Ceratophyllum demersum HOM05D006506 ORTHO05D007809 3.6e-71 272.7 214 63.1
Prupe.2G072500 Prunus persica HOM05D006506 ORTHO05D007809 9.8e-61 238.0 297 47.1
TPR.G26194 Trifolium pratense HOM05D002479 ORTHO05D007809 2.3e-41 173.7 161 55.3
Solyc04g026070.1 Solanum lycopersicum HOM05D006506 ORTHO05D007809 2.0e-34 150.6 121 59.5
Ciclev10027644m.g Citrus clementina HOM05D006506 ORTHO05D007809 2.3e-33 147.1 107 68.2
SMO018G0003 Selaginella moellendorffii HOM05D006506 ORTHO05D007809 7.3e-32 142.1 112 61.6
Cre12.g524350 Chlamydomonas reinhardtii HOM05D006506 ORTHO05D007809 2.3e-30 137.1 277 33.2
ATR0068G037 Amborella trichopoda HOM05D006506 ORTHO05D007809 2.0e-29 134.0 111 59.5
Ciclev10026990m.g Citrus clementina HOM05D006506 ORTHO05D007809 2.1e-26 124.0 107 60.7
Nn4g24996 Nelumbo nucifera HOM05D006506 ORTHO05D007809 1.5e-24 117.9 62 83.9
PRCOL_00003381 Prasinoderma coloniale HOM05D006506 ORTHO05D007809 1.9e-24 117.5 365 29.6
Solyc08g044480.1 Solanum lycopersicum HOM05D006506 ORTHO05D007809 3.1e-22 110.2 136 41.9
MCO05G139 Micromonas commoda HOM05D006506 ORTHO05D007809 5.2e-22 109.4 323 28.2
MBI08_g32097_MAGBIO Magnolia biondii HOM05D006506 ORTHO05D007809 4.6e-18 96.3 71 70.4
Mapoly1721s0002 Marchantia polymorpha HOM05D006506 ORTHO05D007809 1.2e-15 88.2 62 66.1


User provided reference genes

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