Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aa31LG10G1670 Aethionema arabicum HOM05D001692 ORTHO05D005276 2.9e-171 605.1 305 100.0
BcaC08g43540 Brassica carinata HOM05D001692 ORTHO05D005276 6.1e-121 438.0 305 77.0
Carub.0001s4279 Capsella rubella HOM05D001692 ORTHO05D005276 1.8e-120 436.4 299 77.6
Sp1g40080 Schrenkiella parvula HOM05D001692 ORTHO05D005276 2.3e-120 436.0 310 74.8
Thhalv10011701m.g Eutrema salsugineum HOM05D001692 ORTHO05D005276 5.2e-120 434.9 304 76.6
AL1G62170 Arabidopsis lyrata HOM05D001692 ORTHO05D005276 1.5e-119 433.3 303 77.6
AT1G53580 Arabidopsis thaliana HOM05D001692 ORTHO05D005276 2.0e-119 433.0 297 78.5
A08p01500 Brassica napus HOM05D001692 ORTHO05D005276 1.7e-118 429.9 310 74.5
C06p09290 Brassica napus HOM05D001692 ORTHO05D005276 2.8e-118 429.1 305 75.7
BraA08t32202Z Brassica rapa HOM05D001692 ORTHO05D005276 3.7e-118 428.7 310 74.5
C03p91630 Brassica napus HOM05D001692 ORTHO05D005276 4.9e-118 428.3 303 75.9
BolC3t21480H Brassica oleracea HOM05D001692 ORTHO05D005276 1.4e-117 426.8 303 75.6
BcaB04g17072 Brassica carinata HOM05D001692 ORTHO05D005276 1.2e-116 423.7 310 73.2
BcaC01g01401 Brassica carinata HOM05D001692 ORTHO05D005276 1.2e-116 423.7 308 73.7
BcaB07g33320 Brassica carinata HOM05D001692 ORTHO05D005276 5.9e-116 421.4 306 73.2
CARHR043840 Cardamine hirsuta HOM05D001692 ORTHO05D005276 4.3e-114 415.2 262 81.3
BolC6t36007H Brassica oleracea HOM05D001692 ORTHO05D005276 2.8e-113 412.5 294 75.5
A06p00940 Brassica napus HOM05D001692 ORTHO05D005276 2.3e-112 409.5 277 75.5
SalBow1G5551 Salvia bowleyana HOM05D001692 ORTHO05D005276 1.2e-111 407.1 303 71.0
Cpa.g.sc77.83 Carica papaya HOM05D001692 ORTHO05D005276 1.5e-111 406.8 300 70.3
THA.LOC104822594 Tarenaya hassleriana HOM05D001692 ORTHO05D005276 1.3e-110 403.7 315 70.5
Ciclev10021343m.g Citrus clementina HOM05D001692 ORTHO05D005276 1.8e-109 399.8 257 77.0
SalBow8G1908 Salvia bowleyana HOM05D001692 ORTHO05D005276 1.8e-109 399.8 303 70.6
MD09G1149000 Malus domestica HOM05D001692 ORTHO05D005276 3.2e-109 399.1 266 76.7
GSVIVG01020841001 Vitis vinifera HOM05D001692 ORTHO05D005276 1.6e-108 396.7 267 76.0
MD17G1135300 Malus domestica HOM05D001692 ORTHO05D005276 2.7e-108 396.0 266 75.9
MSTRG.6728 Avicennia marina HOM05D001692 ORTHO05D005276 4.6e-108 395.2 265 74.0
CsaV3_4G032640 Cucumis sativus L. HOM05D001692 ORTHO05D005276 4.6e-108 395.2 284 71.8
Migut.M00626 Erythranthe guttata HOM05D001692 ORTHO05D005276 4.6e-108 395.2 273 72.5
FvH4_6g38610 Fragaria vesca HOM05D001692 ORTHO05D005276 4.6e-108 395.2 264 76.5
Oeu001313.1 Olea europaea HOM05D001692 ORTHO05D005276 4.6e-108 395.2 274 72.6
Solyc07g061960.3 Solanum lycopersicum HOM05D001692 ORTHO05D005276 5.9e-108 394.8 276 71.7
Sopen07g030230 Solanum pennellii HOM05D001692 ORTHO05D005276 7.8e-108 394.4 295 68.1
TAR627G0628 Trochodendron aralioides HOM05D001692 ORTHO05D005276 7.8e-108 394.4 271 72.0
Sed0008182 Sechium edule HOM05D001692 ORTHO05D005276 1.0e-107 394.0 266 75.2
Dinv13329 Davidia involucrata HOM05D001692 ORTHO05D005276 3.9e-107 392.1 280 71.1
Glyma.13G261400 Glycine max HOM05D001692 ORTHO05D005276 3.9e-107 392.1 267 74.5
PGSC0003DMG400008562 Solanum tuberosum HOM05D001692 ORTHO05D005276 3.9e-107 392.1 258 75.2
Potri.001G380100 Populus trichocarpa HOM05D001692 ORTHO05D005276 5.0e-107 391.7 283 71.7
Haze_13535 Corylus avellana HOM05D001692 ORTHO05D005276 6.6e-107 391.3 303 68.0
LjContig00272g0024686 Lotus japonicus HOM05D001692 ORTHO05D005276 6.6e-107 391.3 270 74.4
Gohir.A01G044100 Gossypium hirsutum HOM05D001692 ORTHO05D005276 8.6e-107 391.0 265 74.0
HanXRQChr10g0305671 Helianthus annuus HOM05D001692 ORTHO05D005276 8.6e-107 391.0 274 71.9
Peaxi162Scf00111g00115 Petunia axillaris HOM05D001692 ORTHO05D005276 8.6e-107 391.0 264 73.5
Prupe.3G177200 Prunus persica HOM05D001692 ORTHO05D005276 8.6e-107 391.0 265 74.0
CSS0026037 Camellia sinensis var. sinensis HOM05D001692 ORTHO05D005276 1.1e-106 390.6 271 71.6
MSTRG.15020 Avicennia marina HOM05D001692 ORTHO05D005276 1.5e-106 390.2 303 66.3
ClCG11G017000 Citrullus lanatus HOM05D001692 ORTHO05D005276 1.5e-106 390.2 284 71.1
RcHm_v2.0_Chr2g0152061 Rosa chinensis HOM05D001692 ORTHO05D005276 1.5e-106 390.2 268 74.6
FAN05G1140 Fragaria x ananassa HOM05D001692 ORTHO05D005276 1.9e-106 389.8 267 74.9
Ca_03405_v3 Cicer arietinum L. HOM05D001692 ORTHO05D005276 2.5e-106 389.4 260 75.0
COL.COLO4_17437 Corchorus olitorius HOM05D001692 ORTHO05D003541 2.5e-106 389.4 291 70.1
Nitab4.5_0006409g0020 Nicotiana tabacum HOM05D001692 ORTHO05D005276 2.5e-106 389.4 272 71.0
QL08p044937 Quercus lobata HOM05D001692 ORTHO05D005276 2.5e-106 389.4 290 69.7
Gohir.D01G034901 Gossypium hirsutum HOM05D001692 ORTHO05D005276 3.3e-106 389.0 265 73.6
Gorai.002G043100 Gossypium raimondii HOM05D001692 ORTHO05D005276 4.3e-106 388.7 311 66.2
CSS0018182 Camellia sinensis var. sinensis HOM05D001692 ORTHO05D005276 5.6e-106 388.3 269 72.1
Lsat_1_v5_gn_5_126060 Lactuca sativa HOM05D001692 ORTHO05D005276 5.6e-106 388.3 266 71.8
Medtr2g072190 Medicago truncatula HOM05D001692 ORTHO05D005276 5.6e-106 388.3 279 69.9
Sabra16G0250400 Salix brachista HOM05D001692 ORTHO05D005276 5.6e-106 388.3 292 68.8
Lj3g0022741 Lotus japonicus HOM05D001692 ORTHO05D005276 7.3e-106 387.9 268 74.3
Nn3g20715 Nelumbo nucifera HOM05D001692 ORTHO05D005276 7.3e-106 387.9 295 67.5
arahy.Tifrunner.gnm1.ann1.YW8AP0 Arachis hypogaea HOM05D001692 ORTHO05D005276 9.5e-106 387.5 336 62.2
FAN14G4917 Fragaria x ananassa HOM05D001692 ORTHO05D005276 9.5e-106 387.5 282 71.6
Phvul.005G062700 Phaseolus vulgaris HOM05D001692 ORTHO05D005276 9.5e-106 387.5 298 68.8
Potri.005G204800 Populus trichocarpa HOM05D001692 ORTHO05D005276 9.5e-106 387.5 275 71.3
Sed0012666 Sechium edule HOM05D001692 ORTHO05D005276 9.5e-106 387.5 282 70.6
Eucgr.L01848 Eucalyptus grandis HOM05D001692 ORTHO05D005276 1.2e-105 387.1 300 67.7
Solyc12g011430.3 Solanum lycopersicum HOM05D001692 ORTHO05D005276 1.2e-105 387.1 293 68.6
GSVIVG01000481001 Vitis vinifera HOM05D001692 ORTHO05D005276 1.6e-105 386.7 254 75.6
Duzib187G0194 Durio zibethinus HOM05D001692 ORTHO05D005276 2.1e-105 386.3 276 72.5
Aqoxy1G01726 Aquilegia oxysepala HOM05D001692 ORTHO05D005276 2.8e-105 386.0 272 71.3
CAN.G375.74 Capsicum annuum HOM05D001692 ORTHO05D005276 3.6e-105 385.6 268 71.3
TWI59G0785 Tripterygium wilfordii HOM05D001692 ORTHO05D005276 3.6e-105 385.6 282 70.9
Nitab4.5_0009792g0010 Nicotiana tabacum HOM05D001692 ORTHO05D005276 8.0e-105 384.4 295 68.1
PSO675G6085 Papaver somniferum HOM05D001692 ORTHO05D005276 8.0e-105 384.4 264 72.0
Lj8A144G64 Lonicera japonica HOM05D001692 ORTHO05D005276 1.0e-104 384.0 266 71.8
Sopen12g006780 Solanum pennellii HOM05D001692 ORTHO05D005276 1.0e-104 384.0 257 73.9
CSS0017658 Camellia sinensis var. sinensis HOM05D001692 ORTHO05D005276 2.3e-104 382.9 262 72.5
MBI07_g26365_MAGBIO Magnolia biondii HOM05D001692 ORTHO05D005276 2.3e-104 382.9 271 70.1
CSS0030572 Camellia sinensis var. sinensis HOM05D001692 ORTHO05D005276 3.1e-104 382.5 263 72.2
Manes.02G089400 Manihot esculenta HOM05D001692 ORTHO05D005276 4.0e-104 382.1 274 71.5
EL10Ac4g08464 Beta vulgaris HOM05D001692 ORTHO05D005276 5.2e-104 381.7 293 67.2
CANSAT64G1255 Cannabis sativa HOM05D001692 ORTHO05D005276 5.2e-104 381.7 265 72.8
COL.COLO4_08889 Corchorus olitorius HOM05D001692 ORTHO05D005276 5.2e-104 381.7 266 71.8
FAN02G2152 Fragaria x ananassa HOM05D001692 ORTHO05D005276 6.8e-104 381.3 287 70.7
Lalb_Chr01g0016151 Lupinus albus HOM05D001692 ORTHO05D005276 6.8e-104 381.3 268 72.4
arahy.Tifrunner.gnm1.ann1.E3Z39S Arachis hypogaea HOM05D001692 ORTHO05D005276 1.2e-103 380.6 299 67.2
Eucgr.F01401 Eucalyptus grandis HOM05D001692 ORTHO05D005276 1.5e-103 380.2 266 71.8
CANSAT56G0439 Cannabis sativa HOM05D001692 ORTHO05D005276 2.0e-103 379.8 287 69.3
Eucgr.A02020 Eucalyptus grandis HOM05D001692 ORTHO05D005276 2.0e-103 379.8 274 70.1
Dinv26682 Davidia involucrata HOM05D001692 ORTHO05D005276 3.4e-103 379.0 268 70.9
PSO541G6360 Papaver somniferum HOM05D001692 ORTHO05D005276 3.4e-103 379.0 260 72.3
PGR042G3356 Punica granatum HOM05D001692 ORTHO05D005276 3.4e-103 379.0 262 72.1
VMungo1080G0123 Vigna mungo HOM05D001692 ORTHO05D005276 4.4e-103 378.6 292 69.9
CiPaw.03G191700 Carya illinoinensis HOM05D001692 ORTHO05D005276 5.8e-103 378.3 270 71.1
Cc05_g10460 Coffea canephora HOM05D001692 ORTHO05D005276 5.8e-103 378.3 270 69.6
Os01g0667200 Oryza sativa ssp. japonica HOM05D001692 ORTHO05D005276 2.9e-102 375.9 278 69.8
Peaxi162Scf00000g05119 Petunia axillaris HOM05D001692 ORTHO05D005276 8.3e-102 374.4 264 71.6
FAN09G0561 Fragaria x ananassa HOM05D001692 ORTHO05D005276 1.1e-101 374.0 291 69.1
DCAR_019628 Daucus carota HOM05D001692 ORTHO05D005276 1.4e-101 373.6 291 67.0
unitig_899.g15303 Utricularia gibba HOM05D001692 ORTHO05D005276 1.4e-101 373.6 273 70.0
ECA234G1166 Erigeron canadensis HOM05D001692 ORTHO05D005276 3.2e-101 372.5 257 72.4
AUR62037988 Chenopodium quinoa HOM05D001692 ORTHO05D005276 4.1e-101 372.1 264 70.8
Sc03g0010860 Simmondsia chinensis HOM05D001692 ORTHO05D005276 4.1e-101 372.1 275 69.8
SGA_v2.0_scaffold70G23592 Striga asiatica HOM05D001692 ORTHO05D005276 4.1e-101 372.1 330 61.8
Nn4g26535 Nelumbo nucifera HOM05D001692 ORTHO05D005276 9.2e-101 370.9 267 69.7
ATR0585G035 Amborella trichopoda HOM05D001692 ORTHO05D005276 2.0e-100 369.8 293 65.2
AUR62019708 Chenopodium quinoa HOM05D001692 ORTHO05D005276 3.0e-99 365.9 260 70.4
Mapoly0002s0284 Marchantia polymorpha HOM05D001692 ORTHO05D005276 3.9e-99 365.5 266 70.7
MBI10_g02223_MAGBIO Magnolia biondii HOM05D001692 ORTHO05D005276 5.6e-98 361.7 273 65.6
SEGI_02719 Sequoiadendron giganteum HOM05D001692 ORTHO05D005276 9.5e-98 360.9 259 68.7
HPP92_009985 Vanilla planifolia HOM05D001692 ORTHO05D005276 4.7e-97 358.6 268 67.5
CARHR043830 Cardamine hirsuta HOM05D001692 ORTHO05D005276 4.0e-96 355.5 258 69.8
CDE09G1013 Ceratophyllum demersum HOM05D001692 ORTHO05D005276 2.0e-95 353.2 271 64.6
Zm00001eb157380 Zea mays HOM05D001692 ORTHO05D005276 3.4e-95 352.4 326 58.3
SMO364G0689 Selaginella moellendorffii HOM05D001692 ORTHO05D005276 1.3e-94 350.5 264 66.3
PGSC0003DMG400007053 Solanum tuberosum HOM05D001692 ORTHO05D005276 4.9e-94 348.6 245 73.1
Pp3c15_10210 Physcomitrium patens HOM05D001692 ORTHO05D005276 8.3e-94 347.8 261 65.5
MELO3C025595.2 Cucumis melo HOM05D001692 ORTHO05D005276 1.4e-93 347.1 284 64.8
Pp3c9_13000 Physcomitrium patens HOM05D001692 ORTHO05D005276 2.7e-92 342.8 272 61.8
CAN.G1320.2 Capsicum annuum HOM05D001692 ORTHO05D005276 3.0e-91 339.3 276 64.9
Psat1g009000 Pisum sativum HOM05D001692 ORTHO05D005276 3.0e-91 339.3 268 66.0
Nitab4.5_0005492g0050 Nicotiana tabacum HOM05D001692 ORTHO05D005276 2.8e-89 332.8 252 67.9
CARHR042800 Cardamine hirsuta HOM05D001692 ORTHO05D005276 1.5e-87 327.0 258 65.9
Duzib213G0109 Durio zibethinus HOM05D001692 ORTHO05D005276 2.6e-87 326.2 238 71.0
Thecc.01G169600 Theobroma cacao HOM05D001692 ORTHO05D005276 7.1e-85 318.2 237 69.2
Nitab4.5_0000639g0070 Nicotiana tabacum HOM05D001692 ORTHO05D005276 7.1e-77 291.6 312 54.2
Thecc.07G141800 Theobroma cacao HOM05D001692 ORTHO05D005276 7.1e-77 291.6 276 59.1
BraA06t23321Z Brassica rapa HOM05D001692 ORTHO05D005276 2.1e-76 290.0 172 83.7
TPR.G29676 Trifolium pratense HOM05D001692 ORTHO05D005276 1.7e-75 287.0 265 58.9
CBR_g52354 Chara braunii HOM05D001692 ORTHO05D005276 6.6e-75 285.0 298 53.0
RhsimUnG0205800 Rhododendron simsii HOM05D001692 ORTHO05D005276 6.2e-73 278.5 168 79.8
PGR083G0106 Punica granatum HOM05D001692 ORTHO05D005276 6.9e-72 275.0 239 60.7
Actinidia03648 Actinidia chinensis HOM05D001692 ORTHO05D005276 9.9e-71 271.2 249 59.4
Sabra05G0155600 Salix brachista HOM05D001692 ORTHO05D005276 1.4e-69 267.3 163 77.3
MCO11G587 Micromonas commoda HOM05D001692 ORTHO05D005276 1.9e-66 256.9 278 51.8
PRCOL_00005441 Prasinoderma coloniale HOM05D001692 ORTHO05D005276 4.0e-64 249.2 266 51.1
vmacro09424 Vaccinium macrocarpon HOM05D001692 ORTHO05D005276 4.0e-64 249.2 266 53.8
MBI10_g05866_MAGBIO Magnolia biondii HOM05D001692 ORTHO05D005276 3.8e-62 242.7 213 58.2
Haze_27488 Corylus avellana HOM05D001692 ORTHO05D005276 9.6e-58 228.0 258 50.8
Hund10367 Selenicereus undatus HOM05D001692 ORTHO05D005276 5.3e-56 222.2 240 52.1
TPR.G19262 Trifolium pratense HOM05D001692 ORTHO05D005276 3.7e-49 199.5 145 67.6
CBR_g8131 Chara braunii HOM05D001692 ORTHO05D005276 1.8e-48 197.2 184 54.9
Lalb_Chr25g0285521 Lupinus albus HOM05D001692 ORTHO05D005276 2.0e-47 193.7 157 62.4
Gorai.006G053200 Gossypium raimondii HOM05D001692 ORTHO05D005276 7.6e-47 191.8 149 64.4
Gohir.D03G015800 Gossypium hirsutum HOM05D001692 ORTHO05D005276 1.9e-45 187.2 142 65.5
Gohir.D06G025300 Gossypium hirsutum HOM05D001692 ORTHO05D005276 1.9e-45 187.2 142 65.5
Gohir.D11G187900 Gossypium hirsutum HOM05D001692 ORTHO05D005276 1.9e-45 187.2 142 65.5
Gorai.005G073200 Gossypium raimondii HOM05D001692 ORTHO05D005276 6.1e-44 182.2 142 64.8
CDE02G1772 Ceratophyllum demersum HOM05D001692 ORTHO05D005276 7.9e-44 181.8 121 69.4
Gohir.D04G055900 Gossypium hirsutum HOM05D001692 ORTHO05D005276 7.4e-42 175.3 142 63.4
SHI03278 Sapria himalayana HOM05D001692 ORTHO05D005276 1.7e-41 174.1 134 62.7
Lsat_1_v5_gn_0_2340 Lactuca sativa HOM05D001692 ORTHO05D005276 1.1e-32 144.8 131 55.0
Gorai.013G082600 Gossypium raimondii HOM05D001692 ORTHO05D005276 2.0e-31 140.6 116 61.2
CDE02G3376 Ceratophyllum demersum HOM05D001692 ORTHO05D005276 1.0e-30 138.3 118 62.7
vmacro09423 Vaccinium macrocarpon HOM05D001692 ORTHO05D005276 1.1e-29 134.8 78 80.8
Sabra05G0155400 Salix brachista HOM05D001692 ORTHO05D005276 3.2e-29 133.3 90 71.1
RhsimUnG0205900 Rhododendron simsii HOM05D001692 ORTHO05D005276 2.0e-26 124.0 73 76.7
AagrBONN_evm.TU.Sc2ySwM_117.1112 Anthoceros agrestis HOM05D001692 ORTHO05D005276 9.1e-24 115.2 98 59.2
SHI03282 Sapria himalayana HOM05D001692 ORTHO05D005276 1.0e-14 85.1 49 79.6
Medtr7g118110 Medicago truncatula HOM05D000168 ORTHO05D048861 3.8e-14 83.2 51 74.5
Medtr5g021570 Medicago truncatula HOM05D001692 ORTHO05D048896 3.2e-13 80.1 46 76.1
Medtr5g097770 Medicago truncatula HOM05D001692 ORTHO05D048896 3.2e-13 80.1 46 76.1
AagrBONN_evm.TU.Sc2ySwM_344.1644 Anthoceros agrestis HOM05D002042 ORTHO05D003928 1.0e-11 75.1 230 28.7
Aa31LG3G3840 Aethionema arabicum HOM05D002042 ORTHO05D008431 1.8e-11 74.3 190 31.6
SHI03281 Sapria himalayana HOM05D001692 ORTHO05D000001 2.3e-11 73.9 45 77.8
Pp3c3_9810 Physcomitrium patens HOM05D002042 ORTHO05D003928 2.6e-10 70.5 189 30.7
Lj3g0017638 Lotus japonicus HOM05D002042 ORTHO05D003928 7.5e-10 68.9 199 29.1
AagrBONN_evm.TU.Sc2ySwM_344.1580 Anthoceros agrestis HOM05D002042 ORTHO05D008431 9.8e-10 68.6 140 32.9
Dinv34509 Davidia involucrata HOM05D002042 ORTHO05D008431 9.8e-10 68.6 137 32.8
Aqoxy4G03308 Aquilegia oxysepala HOM05D002042 ORTHO05D008431 1.7e-09 67.8 191 28.8
Haze_26804 Corylus avellana HOM05D002042 ORTHO05D003928 3.7e-09 66.6 173 30.6
EL10Ac2g02685 Beta vulgaris HOM05D002042 ORTHO05D008431 8.3e-09 65.5 188 30.3
Phvul.011G053100 Phaseolus vulgaris HOM05D002042 ORTHO05D003928 1.1e-08 65.1 195 30.3
PRCOL_00006080 Prasinoderma coloniale HOM05D002042 ORTHO05D003928 1.4e-08 64.7 159 30.8
VMungo1127G1149 Vigna mungo HOM05D002042 ORTHO05D003928 2.4e-08 63.9 195 29.2
Pp3c8_15440 Physcomitrium patens HOM05D002042 ORTHO05D008431 1.3e-06 58.2 189 29.6
Cfa025793 Carpinus fangiana HOM05D002042 ORTHO05D008431 2.3e-06 57.4 196 30.6
SEGI_22633 Sequoiadendron giganteum HOM05D002042 ORTHO05D003928 2.3e-06 57.4 177 31.6


User provided reference genes

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