Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aa31LG10G16570 Aethionema arabicum HOM05D002674 ORTHO05D008041 8.3e-49 196.8 107 100.0
Carub.0005s2947 Capsella rubella HOM05D002674 ORTHO05D008041 4.0e-43 177.9 107 88.8
Sp5g00710 Schrenkiella parvula HOM05D002674 ORTHO05D008041 4.0e-43 177.9 107 88.8
AT3G62810 Arabidopsis thaliana HOM05D002674 ORTHO05D008041 8.9e-43 176.8 107 89.7
BcaC02g10314 Brassica carinata HOM05D002674 ORTHO05D008041 1.5e-42 176.0 107 88.8
A04p00510 Brassica napus HOM05D002674 ORTHO05D008041 1.5e-42 176.0 107 88.8
BolC4t24576H Brassica oleracea HOM05D002674 ORTHO05D008041 1.5e-42 176.0 107 88.8
BraA04t15771Z Brassica rapa HOM05D002674 ORTHO05D008041 1.5e-42 176.0 107 88.8
AL5G45590 Arabidopsis lyrata HOM05D002674 ORTHO05D008041 2.0e-42 175.6 107 88.8
Thhalv10006327m.g Eutrema salsugineum HOM05D002674 ORTHO05D008041 1.3e-41 172.9 107 86.9
BcaC07g42733 Brassica carinata HOM05D002674 ORTHO05D008041 4.9e-41 171.0 107 86.0
C04p30420 Brassica napus HOM05D002674 ORTHO05D008041 6.4e-41 170.6 107 86.9
BcaB02g08097 Brassica carinata HOM05D002674 ORTHO05D008041 2.1e-39 165.6 107 83.2
CARHR173080 Cardamine hirsuta HOM05D002674 ORTHO05D008041 1.7e-38 162.5 105 82.9
BraA09t40877Z Brassica rapa HOM05D002674 ORTHO05D008041 8.6e-38 160.2 107 82.2
A09p54660 Brassica napus HOM05D002674 ORTHO05D008041 1.6e-36 156.0 107 80.4
TWI23G1311 Tripterygium wilfordii HOM05D002674 ORTHO05D008041 1.4e-35 152.9 103 77.7
COL.COLO4_23349 Corchorus olitorius HOM05D002674 ORTHO05D008041 3.1e-35 151.8 105 75.2
Thecc.01G300000 Theobroma cacao HOM05D002674 ORTHO05D008041 3.1e-35 151.8 105 74.3
Cpa.g.sc9.264 Carica papaya HOM05D002674 ORTHO05D008041 4.0e-35 151.4 103 76.7
Oeu048338.1 Olea europaea HOM05D002674 ORTHO05D008041 3.4e-34 148.3 99 76.8
Manes.01G218700 Manihot esculenta HOM05D002674 ORTHO05D008041 5.8e-34 147.5 103 75.7
Gohir.D08G085400 Gossypium hirsutum HOM05D002674 ORTHO05D008041 9.9e-34 146.7 106 71.7
Gohir.A08G076000 Gossypium hirsutum HOM05D002674 ORTHO05D008041 1.3e-33 146.4 106 70.8
Ciclev10022953m.g Citrus clementina HOM05D002674 ORTHO05D008041 2.2e-33 145.6 104 70.2
Atru.chr5.1150 Acer truncatum HOM05D002674 ORTHO05D008041 2.9e-33 145.2 105 71.4
Cc01_g20820 Coffea canephora HOM05D002674 ORTHO05D008041 4.9e-33 144.4 99 74.7
Prupe.8G261100 Prunus persica HOM05D002674 ORTHO05D008041 4.9e-33 144.4 103 73.8
TWI14G1447 Tripterygium wilfordii HOM05D002674 ORTHO05D008041 6.4e-33 144.1 105 71.4
ECA247G1692 Erigeron canadensis HOM05D002674 ORTHO05D008041 8.4e-33 143.7 106 71.7
Potri.014G129800 Populus trichocarpa HOM05D002674 ORTHO05D008041 1.1e-32 143.3 100 73.0
SalBow3G0298 Salvia bowleyana HOM05D002674 ORTHO05D008041 1.4e-32 142.9 96 77.1
Hund18156 Selenicereus undatus HOM05D002674 ORTHO05D008041 1.4e-32 142.9 99 72.7
Atru.chr7.1564 Acer truncatum HOM05D002674 ORTHO05D008041 1.9e-32 142.5 103 71.8
Sabra02G0154500 Salix brachista HOM05D002674 ORTHO05D008041 3.2e-32 141.7 100 72.0
ClCG10G010910 Citrullus lanatus HOM05D002674 ORTHO05D008041 7.1e-32 140.6 102 70.6
SGA_v2.0_scaffold2G01395 Striga asiatica HOM05D002674 ORTHO05D008041 7.1e-32 140.6 101 71.3
MSTRG.21632 Avicennia marina HOM05D002674 ORTHO05D008041 1.2e-31 139.8 106 71.7
RcHm_v2.0_Chr6g0293971 Rosa chinensis HOM05D002674 ORTHO05D008041 1.2e-31 139.8 103 70.9
HanXRQChr15g0465661 Helianthus annuus HOM05D002674 ORTHO05D008041 2.1e-31 139.0 105 66.7
Dinv19696 Davidia involucrata HOM05D002674 ORTHO05D008041 3.5e-31 138.3 100 70.0
Duzib133G1209 Durio zibethinus HOM05D002674 ORTHO05D007700 3.5e-31 138.3 105 68.6
MD11G1310400 Malus domestica HOM05D002674 ORTHO05D008041 3.5e-31 138.3 105 67.6
Sed0019690 Sechium edule HOM05D002674 ORTHO05D008041 3.5e-31 138.3 103 68.9
FvH4_2g25692 Fragaria vesca HOM05D002674 ORTHO05D008041 4.6e-31 137.9 103 69.9
EL10Ac7g17468 Beta vulgaris HOM05D002674 ORTHO05D008041 6.0e-31 137.5 105 65.7
AUR62033146 Chenopodium quinoa HOM05D002674 ORTHO05D008041 7.8e-31 137.1 105 66.7
MELO3C017957.2 Cucumis melo HOM05D002674 ORTHO05D008041 7.8e-31 137.1 100 71.0
TAR636G2182 Trochodendron aralioides HOM05D002674 ORTHO05D008041 7.8e-31 137.1 101 68.3
CsaV3_4G000790 Cucumis sativus L. HOM05D002674 ORTHO05D008041 1.3e-30 136.3 100 70.0
CiPaw.07G108500 Carya illinoinensis HOM05D002674 ORTHO05D008041 1.7e-30 136.0 102 68.6
CDE12G0521 Ceratophyllum demersum HOM05D002674 ORTHO05D008041 2.3e-30 135.6 99 71.7
AUR62008625 Chenopodium quinoa HOM05D002674 ORTHO05D008041 3.0e-30 135.2 105 65.7
MBI19_g25355_MAGBIO Magnolia biondii HOM05D002674 ORTHO05D008041 3.9e-30 134.8 101 71.3
FvH4_3g17380 Fragaria vesca HOM05D002674 ORTHO05D008041 5.1e-30 134.4 99 69.7
FAN11G2206 Fragaria x ananassa HOM05D002674 ORTHO05D008041 5.1e-30 134.4 99 69.7
FAN21G2416 Fragaria x ananassa HOM05D002674 ORTHO05D008041 5.1e-30 134.4 99 69.7
Migut.D00216 Erythranthe guttata HOM05D002674 ORTHO05D008041 6.6e-30 134.0 98 70.4
Actinidia32214 Actinidia chinensis HOM05D002674 ORTHO05D008041 8.7e-30 133.7 104 66.3
FAN16G1943 Fragaria x ananassa HOM05D002674 ORTHO05D008041 1.5e-29 132.9 99 68.7
FAN25G1445 Fragaria x ananassa HOM05D002674 ORTHO05D008041 1.5e-29 132.9 99 69.7
GSVIVG01028011001 Vitis vinifera HOM05D002674 ORTHO05D008041 1.5e-29 132.9 99 70.7
CSS0018179 Camellia sinensis var. sinensis HOM05D002674 ORTHO05D008041 1.9e-29 132.5 102 64.7
PGR044G1069 Punica granatum HOM05D002674 ORTHO05D008041 1.9e-29 132.5 94 74.5
Eucgr.H01115 Eucalyptus grandis HOM05D002674 ORTHO05D008041 3.3e-29 131.7 104 65.4
Dinv33053 Davidia involucrata HOM05D002674 ORTHO05D007700 5.6e-29 131.0 100 67.0
CANSAT25G0502 Cannabis sativa HOM05D002674 ORTHO05D008041 7.3e-29 130.6 103 66.0
MD03G1287900 Malus domestica HOM05D002674 ORTHO05D008041 1.3e-28 129.8 105 63.8
Nn3g21482 Nelumbo nucifera HOM05D002674 ORTHO05D008041 1.6e-28 129.4 101 67.3
QL12p028510 Quercus lobata HOM05D002674 ORTHO05D008041 2.8e-28 128.6 101 66.3
unitig_61.g26303 Utricularia gibba HOM05D002674 ORTHO05D008041 1.1e-27 126.7 103 64.1
Haze_04934 Corylus avellana HOM05D002674 ORTHO05D008041 1.4e-27 126.3 102 61.8
Aqoxy5G00753 Aquilegia oxysepala HOM05D002674 ORTHO05D008041 2.4e-27 125.6 101 65.3
PGR119G0614 Punica granatum HOM05D002674 ORTHO05D008041 2.4e-27 125.6 102 65.7
CAN.G472.1 Capsicum annuum HOM05D002674 ORTHO05D008041 5.3e-27 124.4 101 62.4
Cfa005915 Carpinus fangiana HOM05D002674 ORTHO05D008041 5.3e-27 124.4 102 60.8
Peaxi162Scf00001g00445 Petunia axillaris HOM05D002674 ORTHO05D008041 5.3e-27 124.4 101 61.4
Rhsim13G0010400 Rhododendron simsii HOM05D002674 ORTHO05D008041 5.3e-27 124.4 116 60.3
Solyc09g075100.3 Solanum lycopersicum HOM05D002674 ORTHO05D008041 5.3e-27 124.4 101 62.4
Sopen09g029920 Solanum pennellii HOM05D002674 ORTHO05D008041 5.3e-27 124.4 101 62.4
PGSC0003DMG400011376 Solanum tuberosum HOM05D002674 ORTHO05D008041 5.3e-27 124.4 108 61.1
Lalb_Chr21g0306851 Lupinus albus HOM05D002674 ORTHO05D008041 9.0e-27 123.6 101 64.4
Ca_10338_v3 Cicer arietinum L. HOM05D002674 ORTHO05D008041 1.2e-26 123.2 104 63.5
Phvul.007G146200 Phaseolus vulgaris HOM05D002674 ORTHO05D008041 1.2e-26 123.2 104 63.5
VMungo0720G1979 Vigna mungo HOM05D002674 ORTHO05D008041 1.2e-26 123.2 104 63.5
Psat6g166360 Pisum sativum HOM05D002674 ORTHO05D008041 1.5e-26 122.9 100 63.0
Nitab4.5_0001879g0010 Nicotiana tabacum HOM05D002674 ORTHO05D008041 2.0e-26 122.5 99 62.6
Nitab4.5_0008207g0030 Nicotiana tabacum HOM05D002674 ORTHO05D008041 2.0e-26 122.5 99 62.6
PSO210G6076 Papaver somniferum HOM05D002674 ORTHO05D008041 2.6e-26 122.1 101 63.4
ATR0796G030 Amborella trichopoda HOM05D002674 ORTHO05D008041 3.4e-26 121.7 101 62.4
PSO832G1306 Papaver somniferum HOM05D002674 ORTHO05D008041 3.4e-26 121.7 101 63.4
Lj5g0008305 Lotus japonicus HOM05D002674 ORTHO05D008041 1.7e-25 119.4 106 58.5
Medtr1g088550 Medicago truncatula HOM05D002674 ORTHO05D008041 1.7e-25 119.4 104 58.7
arahy.Tifrunner.gnm1.ann1.9NAT9F Arachis hypogaea HOM05D002674 ORTHO05D008041 2.9e-25 118.6 101 63.4
arahy.Tifrunner.gnm1.ann1.UV7MYU Arachis hypogaea HOM05D002674 ORTHO05D008041 2.9e-25 118.6 101 63.4
Glyma.10G018500 Glycine max HOM05D002674 ORTHO05D008041 2.9e-25 118.6 106 59.4
TPR.G34008 Trifolium pratense HOM05D002674 ORTHO05D008041 4.9e-25 117.9 104 60.6
Sabra14G0096400 Salix brachista HOM05D002674 ORTHO05D008041 6.4e-25 117.5 97 61.9
Duzib138G1033 Durio zibethinus HOM05D002674 ORTHO05D008041 1.4e-24 116.3 82 74.4
Gorai.004G089900 Gossypium raimondii HOM05D002674 ORTHO05D008041 2.4e-24 115.5 80 76.2
Oeu010670.1 Olea europaea HOM05D002674 ORTHO05D008041 2.4e-24 115.5 102 62.7
SEGI_38702 Sequoiadendron giganteum HOM05D002674 ORTHO05D008041 3.2e-24 115.2 99 61.6
C08p37560 Brassica napus HOM05D002674 ORTHO05D008041 7.1e-24 114.0 74 83.8
SalBow5G2922 Salvia bowleyana HOM05D002674 ORTHO05D008041 2.1e-23 112.5 76 77.6
SalBow3G1515 Salvia bowleyana HOM05D002674 ORTHO05D008041 4.6e-23 111.3 82 70.7
Sc24g0003780 Simmondsia chinensis HOM05D002674 ORTHO05D008041 4.6e-23 111.3 80 71.2
vmacro02452 Vaccinium macrocarpon HOM05D002674 ORTHO05D008041 6.0e-23 110.9 156 45.5
Lsat_1_v5_gn_9_5640 Lactuca sativa HOM05D002674 ORTHO05D008643 1.8e-22 109.4 79 69.6
CDE01G0164 Ceratophyllum demersum HOM05D002674 ORTHO05D008041 1.1e-21 106.7 83 68.7
Ah.15g093210 Amaranthus hybridus HOM05D002674 ORTHO05D008041 2.8e-20 102.1 89 61.8
Haze_04957 Corylus avellana HOM05D002674 ORTHO05D008041 1.4e-19 99.8 80 63.8
Lalb_Chr02g0143261 Lupinus albus HOM05D000266 ORTHO05D008041 5.3e-19 97.8 82 62.2
Pp3c9_7930 Physcomitrium patens HOM05D002674 ORTHO05D008041 6.9e-19 97.4 91 57.1
Mapoly0061s0038 Marchantia polymorpha HOM05D002674 ORTHO05D008041 5.8e-18 94.4 91 50.5
Os05g0363600 Oryza sativa ssp. japonica HOM05D002674 ORTHO05D008041 9.9e-18 93.6 100 55.0
Glyma.02G018200 Glycine max HOM05D002674 ORTHO05D008041 2.2e-17 92.4 79 62.0
Zm00001eb346590 Zea mays HOM05D002674 ORTHO05D008041 8.4e-17 90.5 100 54.0
DCAR_002831 Daucus carota HOM05D000067 ORTHO05D001807 1.9e-16 89.4 76 63.2
Hma1.2p1_0491F.1_g164520 Hydrangea macrophylla HOM05D002674 ORTHO05D008041 3.2e-16 88.6 78 57.7
HPP92_013721 Vanilla planifolia HOM05D002674 ORTHO05D008041 7.1e-16 87.4 76 59.2
AagrBONN_evm.TU.Sc2ySwM_362.373 Anthoceros agrestis HOM05D002674 ORTHO05D008041 2.7e-15 85.5 94 50.0
BcaC07g40760 Brassica carinata HOM05D002674 ORTHO05D008041 3.5e-15 85.1 52 82.7
BolC8t51336H Brassica oleracea HOM05D002674 ORTHO05D008041 3.5e-15 85.1 52 82.7
RcHm_v2.0_Chr2g0146991 Rosa chinensis HOM05D002674 ORTHO05D008041 2.6e-10 68.9 54 68.5
CBR_g24042 Chara braunii HOM05D002674 ORTHO05D008041 2.9e-09 65.5 77 46.8
MCO07G465 Micromonas commoda HOM05D002674 ORTHO05D008041 7.9e-07 57.4 93 35.5
Peaxi162Scf00545g00027 Petunia axillaris HOM05D002674 ORTHO05D008041 1.0e-06 57.0 56 46.4


User provided reference genes

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